| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224657
Identifier: 212224657
GI number: 212224657
Start: 1380525
End: 1382825
Strand: Reverse
Name: 212224657
Synonym: TON_1506
Alternate gene names: NA
Gene position: 1382825-1380525 (Counterclockwise)
Preceding gene: 212224659
Following gene: 212224651
Centisome position: 74.84
GC content: 35.94
Gene sequence:
>2301_bases ATGGAGAAACAGACTTTTTATCAAGGTAATATGTACCGCCTAAAAGATGAGTTAATCCAAGACATATTATCCGATATTAT CGTTGCTCGAGTCACCAATATGCCTTCTAACCCCGAAGAAGCGTATAGTGAGATACAAAAGATTGGGGGTATCATTCTAA ACTACGATGAGATGACTAACAGTGCATGGGTAGTGGGAAAGGAAAGTCTGCTGCAAAATCATTATCCAGATGATATGAAA GAAGTCAGAGCATTTAGTTTTTCTGAACTGTCGAAAGAAAACAAAACTAAATTAGTACTCAATATCCTTAACGCAGAAGG ATATCTGCGTGACATTCGTGGGCATAGAGAGGTCGTGAAAAGCATTAATTCCGAAAGAAGTATCATACGTAAATTTTTAG TGACAGTTGAGTATGACGGGCAGCATTTTTATCTCGTCACTCTACCAAAGTACAAGATAATTGAAAATCATACAATTATG GAACTGCTGATCGAGGGAAAGATAACTGTTAAGGAGCTAGTACACAATCTCTTAAAAGACCCTAAATGGAAAATACAAAC CTCCAGAAAAGACGTCCCTCTACCTCCGGGACATAGGGTTGTGGAAATTATATTGAAAACTAAGGATCCAGATAGATACC AGCAAGAACTGGAGCGGATTAACGAATATTTCACTAAGAAAACAGAACTTGGTCCCATTGATGACTCTAAGTATCCAGAT GACTATAATATCATTTTCAGGAGTCAAACACGGGGAAAATATTTATCATACCATTCTGCAAGGACAAAATTAATTCGGCC GATAAACAAAGAAATTTTGAGAGAGATCTATAGATCAAACGAATTCATAAAAGCCCTTAACATCGCAAAAAAGTTGGTTG CCGATATAATATACGACTCTACAAAATACCCCGGGCGAGCAATTTTTCCAGCATTTAAAATTGATGAACGAACAATTAGT TACAAGGCAGTATTCCTTAAAAACAAAACAATTACAGAAAAGACGATCCAACCATATTACAATATTAAGGGGACTTTTAA TTGGCTGTTCACTAACACCCCTTTCGATGATATTTCTGAATTAATAATTCCTATCCAATCACCAGAATTTCTGCGAGATA AAACTATTGGAGTGTACATTTTATACCCAGCAAAATATCGGGAGAACTCTGAAAGTCTTAAGGTTATCCAGAACTTAATA AAGAGTGTGGACAGCACAATAAAAAGGCTCTCAGAATATTTTACATTCCTCAGGAAAGTTAATGAAGGTCTTAGTCTTCC CTCAGCCATTGACATTATTAGTAGAATACCTGTAAACTATGAGAACTTAATCGAGAGCGCATTTACAAGGATACATTCCA AAAAGGGAGTTGAATATGACTACCACCTTGCAATAACGCTAATCCCGGATATGAGGCAAGAGCAATTCGATAAAATTAAG GGCTTCTTTTTTAACAATGGAATTCTCCATAAAGCAATTAACATAAACAATTTGCGTGATCCATCTAAAGACCAAAAGAA ACTCATTGAAAGCATGATACTACAAGCACTTTATGCATTTGGCATTTATTTCTATTCTCTCGATAATCTTAACTATGACT TTATAATTGGACTGGATGTAACCCGGGAAATGGATAAAAGTGGGCGATACTACGGTATTTCTGGGGCTGCAGTAGTACAA AATAAAAATGGACAAGTTCTCAAGATTATACCAATAACTTCTCCACAGTCCAGTAGCGAAACAGCCAATATTAACTATCT CATCGGAAATATTCAACAAGAAGCCGCAGCAATATTAAATAGGAAAGGATACGCCGACATATTGTTCTTAAGAGATGGAA AAGTCCCAGGAGGAGAACTTGAACAATTTAAGGAGATTTCTCGAAAATACAACTATAGGTTCACGATAATTGAAATCTTA AAAAGACCATTAGTGCGCTTTTTCTGGGAAAACTATAAAGAACACACTGTCAAGAGTCCACGCCATAATTACTACTTTAA GATTGGTGATACCTATTATCTAACTGCCCACTATTTCACAAATTATCTTAAAGTCCCATTGAAACTTGGAAACACGTATT TCGTAGCACGAGGAAAGATATCTAAAAATGTCATTTCTCGGGAGGACATAATGACAATAACAAAACTCACAAAATTGAAC TATTCACAGCCAGAGAACCCAGATAAAATGAAATTACCTGCTCCTGTGCATTTATCTCACAGACTCATAAACTATGAACG AAGAGAACTCAAATTTAATCGTTATGAATTCCTAAAAGAGGGTGCTCTTTATTTCCTTTAA
Upstream 100 bases:
>100_bases ATGTGGGGAAGATAGAAAAGAGGGTTTTTAGGAGTTATGCCTTATTATCTAAGACAAAAATTATTAAACTTCACATTAAG GGAATTCATATGGTGATGCT
Downstream 100 bases:
>100_bases TCAGGCCCTCTTCCTTACCTTCACGGCAACGCCCTTCTTGGCCCTGACCATCTCCTCGCCACTGAGGACGGCCTTGCCGA CACCGACGACTTTCTCGTCC
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 766; Mature: 766
Protein sequence:
>766_residues MEKQTFYQGNMYRLKDELIQDILSDIIVARVTNMPSNPEEAYSEIQKIGGIILNYDEMTNSAWVVGKESLLQNHYPDDMK EVRAFSFSELSKENKTKLVLNILNAEGYLRDIRGHREVVKSINSERSIIRKFLVTVEYDGQHFYLVTLPKYKIIENHTIM ELLIEGKITVKELVHNLLKDPKWKIQTSRKDVPLPPGHRVVEIILKTKDPDRYQQELERINEYFTKKTELGPIDDSKYPD DYNIIFRSQTRGKYLSYHSARTKLIRPINKEILREIYRSNEFIKALNIAKKLVADIIYDSTKYPGRAIFPAFKIDERTIS YKAVFLKNKTITEKTIQPYYNIKGTFNWLFTNTPFDDISELIIPIQSPEFLRDKTIGVYILYPAKYRENSESLKVIQNLI KSVDSTIKRLSEYFTFLRKVNEGLSLPSAIDIISRIPVNYENLIESAFTRIHSKKGVEYDYHLAITLIPDMRQEQFDKIK GFFFNNGILHKAININNLRDPSKDQKKLIESMILQALYAFGIYFYSLDNLNYDFIIGLDVTREMDKSGRYYGISGAAVVQ NKNGQVLKIIPITSPQSSSETANINYLIGNIQQEAAAILNRKGYADILFLRDGKVPGGELEQFKEISRKYNYRFTIIEIL KRPLVRFFWENYKEHTVKSPRHNYYFKIGDTYYLTAHYFTNYLKVPLKLGNTYFVARGKISKNVISREDIMTITKLTKLN YSQPENPDKMKLPAPVHLSHRLINYERRELKFNRYEFLKEGALYFL
Sequences:
>Translated_766_residues MEKQTFYQGNMYRLKDELIQDILSDIIVARVTNMPSNPEEAYSEIQKIGGIILNYDEMTNSAWVVGKESLLQNHYPDDMK EVRAFSFSELSKENKTKLVLNILNAEGYLRDIRGHREVVKSINSERSIIRKFLVTVEYDGQHFYLVTLPKYKIIENHTIM ELLIEGKITVKELVHNLLKDPKWKIQTSRKDVPLPPGHRVVEIILKTKDPDRYQQELERINEYFTKKTELGPIDDSKYPD DYNIIFRSQTRGKYLSYHSARTKLIRPINKEILREIYRSNEFIKALNIAKKLVADIIYDSTKYPGRAIFPAFKIDERTIS YKAVFLKNKTITEKTIQPYYNIKGTFNWLFTNTPFDDISELIIPIQSPEFLRDKTIGVYILYPAKYRENSESLKVIQNLI KSVDSTIKRLSEYFTFLRKVNEGLSLPSAIDIISRIPVNYENLIESAFTRIHSKKGVEYDYHLAITLIPDMRQEQFDKIK GFFFNNGILHKAININNLRDPSKDQKKLIESMILQALYAFGIYFYSLDNLNYDFIIGLDVTREMDKSGRYYGISGAAVVQ NKNGQVLKIIPITSPQSSSETANINYLIGNIQQEAAAILNRKGYADILFLRDGKVPGGELEQFKEISRKYNYRFTIIEIL KRPLVRFFWENYKEHTVKSPRHNYYFKIGDTYYLTAHYFTNYLKVPLKLGNTYFVARGKISKNVISREDIMTITKLTKLN YSQPENPDKMKLPAPVHLSHRLINYERRELKFNRYEFLKEGALYFL >Mature_766_residues MEKQTFYQGNMYRLKDELIQDILSDIIVARVTNMPSNPEEAYSEIQKIGGIILNYDEMTNSAWVVGKESLLQNHYPDDMK EVRAFSFSELSKENKTKLVLNILNAEGYLRDIRGHREVVKSINSERSIIRKFLVTVEYDGQHFYLVTLPKYKIIENHTIM ELLIEGKITVKELVHNLLKDPKWKIQTSRKDVPLPPGHRVVEIILKTKDPDRYQQELERINEYFTKKTELGPIDDSKYPD DYNIIFRSQTRGKYLSYHSARTKLIRPINKEILREIYRSNEFIKALNIAKKLVADIIYDSTKYPGRAIFPAFKIDERTIS YKAVFLKNKTITEKTIQPYYNIKGTFNWLFTNTPFDDISELIIPIQSPEFLRDKTIGVYILYPAKYRENSESLKVIQNLI KSVDSTIKRLSEYFTFLRKVNEGLSLPSAIDIISRIPVNYENLIESAFTRIHSKKGVEYDYHLAITLIPDMRQEQFDKIK GFFFNNGILHKAININNLRDPSKDQKKLIESMILQALYAFGIYFYSLDNLNYDFIIGLDVTREMDKSGRYYGISGAAVVQ NKNGQVLKIIPITSPQSSSETANINYLIGNIQQEAAAILNRKGYADILFLRDGKVPGGELEQFKEISRKYNYRFTIIEIL KRPLVRFFWENYKEHTVKSPRHNYYFKIGDTYYLTAHYFTNYLKVPLKLGNTYFVARGKISKNVISREDIMTITKLTKLN YSQPENPDKMKLPAPVHLSHRLINYERRELKFNRYEFLKEGALYFL
Specific function: Unknown
COG id: COG1431
COG function: function code J; Uncharacterized protein containing piwi/argonaute domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Piwi domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003100 - InterPro: IPR003165 - InterPro: IPR012337 [H]
Pfam domain/function: PF02171 Piwi [H]
EC number: NA
Molecular weight: Translated: 89728; Mature: 89728
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50822 PIWI
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQTFYQGNMYRLKDELIQDILSDIIVARVTNMPSNPEEAYSEIQKIGGIILNYDEMTN CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEHHCCC SAWVVGKESLLQNHYPDDMKEVRAFSFSELSKENKTKLVLNILNAEGYLRDIRGHREVVK CEEEEEHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHH SINSERSIIRKFLVTVEYDGQHFYLVTLPKYKIIENHTIMELLIEGKITVKELVHNLLKD HCCHHHHHHHHHHEEEEECCCEEEEEECCCEEEECCCHHHHHHHCCCCCHHHHHHHHHCC PKWKIQTSRKDVPLPPGHRVVEIILKTKDPDRYQQELERINEYFTKKTELGPIDDSKYPD CCEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DYNIIFRSQTRGKYLSYHSARTKLIRPINKEILREIYRSNEFIKALNIAKKLVADIIYDS CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC TKYPGRAIFPAFKIDERTISYKAVFLKNKTITEKTIQPYYNIKGTFNWLFTNTPFDDISE CCCCCCEECCEEEECCCEEEEEEEEEECCCCCHHHCCCCEECCEEEEEEEECCCHHHHHH LIIPIQSPEFLRDKTIGVYILYPAKYRENSESLKVIQNLIKSVDSTIKRLSEYFTFLRKV HEEECCCCHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEGLSLPSAIDIISRIPVNYENLIESAFTRIHSKKGVEYDYHLAITLIPDMRQEQFDKIK HHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHC GFFFNNGILHKAININNLRDPSKDQKKLIESMILQALYAFGIYFYSLDNLNYDFIIGLDV CEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECH TREMDKSGRYYGISGAAVVQNKNGQVLKIIPITSPQSSSETANINYLIGNIQQEAAAILN HHHHHCCCCEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHC RKGYADILFLRDGKVPGGELEQFKEISRKYNYRFTIIEILKRPLVRFFWENYKEHTVKSP CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC RHNYYFKIGDTYYLTAHYFTNYLKVPLKLGNTYFVARGKISKNVISREDIMTITKLTKLN CCCEEEEECCEEEEEHHHHHHHHEEEEEECCEEEEEECCHHHHHHCHHHHHHHHHHHHCC YSQPENPDKMKLPAPVHLSHRLINYERRELKFNRYEFLKEGALYFL CCCCCCCCCEECCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEKQTFYQGNMYRLKDELIQDILSDIIVARVTNMPSNPEEAYSEIQKIGGIILNYDEMTN CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEHHCCC SAWVVGKESLLQNHYPDDMKEVRAFSFSELSKENKTKLVLNILNAEGYLRDIRGHREVVK CEEEEEHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHH SINSERSIIRKFLVTVEYDGQHFYLVTLPKYKIIENHTIMELLIEGKITVKELVHNLLKD HCCHHHHHHHHHHEEEEECCCEEEEEECCCEEEECCCHHHHHHHCCCCCHHHHHHHHHCC PKWKIQTSRKDVPLPPGHRVVEIILKTKDPDRYQQELERINEYFTKKTELGPIDDSKYPD CCEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DYNIIFRSQTRGKYLSYHSARTKLIRPINKEILREIYRSNEFIKALNIAKKLVADIIYDS CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC TKYPGRAIFPAFKIDERTISYKAVFLKNKTITEKTIQPYYNIKGTFNWLFTNTPFDDISE CCCCCCEECCEEEECCCEEEEEEEEEECCCCCHHHCCCCEECCEEEEEEEECCCHHHHHH LIIPIQSPEFLRDKTIGVYILYPAKYRENSESLKVIQNLIKSVDSTIKRLSEYFTFLRKV HEEECCCCHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEGLSLPSAIDIISRIPVNYENLIESAFTRIHSKKGVEYDYHLAITLIPDMRQEQFDKIK HHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHC GFFFNNGILHKAININNLRDPSKDQKKLIESMILQALYAFGIYFYSLDNLNYDFIIGLDV CEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECH TREMDKSGRYYGISGAAVVQNKNGQVLKIIPITSPQSSSETANINYLIGNIQQEAAAILN HHHHHCCCCEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHC RKGYADILFLRDGKVPGGELEQFKEISRKYNYRFTIIEILKRPLVRFFWENYKEHTVKSP CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC RHNYYFKIGDTYYLTAHYFTNYLKVPLKLGNTYFVARGKISKNVISREDIMTITKLTKLN CCCEEEEECCEEEEEHHHHHHHHEEEEEECCEEEEEECCHHHHHHCHHHHHHHHHHHHCC YSQPENPDKMKLPAPVHLSHRLINYERRELKFNRYEFLKEGALYFL CCCCCCCCCEECCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]