Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224591

Identifier: 212224591

GI number: 212224591

Start: 1316485

End: 1317078

Strand: Reverse

Name: 212224591

Synonym: TON_1440

Alternate gene names: NA

Gene position: 1317078-1316485 (Counterclockwise)

Preceding gene: 212224596

Following gene: 212224587

Centisome position: 71.29

GC content: 54.55

Gene sequence:

>594_bases
ATGAGGAGTCTCAAGCCCAAGGAGATAGCGGTAATAGGAATTATGCTCGGTCTTTCGCTGATGCTTGAGGTCATGCCAAT
AGAGATGCCCACCATATGGGGCATGAAGATAGACCTCGTTGCAGTCCCGATAGTTATGGTCTACCTCCTCGTGGGTTTCA
CCGGAGGACTGATAGCGCTTTTCCTGCTCTTCGTTGGGCTGAGTATAATTTCCCCGTCAAGCTGGCTCGGAGCCAGTATG
AAGGCCACCGCGACCCTGGCGGTTCTGGTTGGCCTTGAAATAGCGAAGAGAGCAACGCGCTTTGACATCGAGAGTGCATC
CCCAAACAGAATTGTCCTCTTAGCCATCGTCGGCTTTCTCGCCGGAATAGCCATCAGGATACCTCTCATGGTGGCTCTCA
ACTACTACTACGCCCTCCCCATATGGCTCGGCGTTCCGAGGGAGGCAGTGATAAGCACCGTTGAGGAGTGGACGGGTGTT
CCCTTCTGGGTTGCGATAGGGCTTCCAAACGCGGTACAGAGCGCCATTGACGTTTTCGTTGGTCTGGCGGCAACGCTGCC
CGTGTTGAGGTCACTTCCCCATCTCCTTGAGTAG

Upstream 100 bases:

>100_bases
CCGGTTTTTAAGGATTCTTTTGGAGGTTGTCCTCGCGAGTGTTTCATATTGGGAACAAAAATTTATAAATTGTGGAACAA
ACTTCGGGCTGGTGATGAGG

Downstream 100 bases:

>100_bases
CCGGGGAATGTTCTCTGGCTCTAGTCCTCTTTCTTTTAGATATTCGTTCCACTTCTTCGCGTACTCCAGGAAGGTCTCGT
CGCCTGTTTTCATGTAGAGC

Product: membrane protein, conserved

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRSLKPKEIAVIGIMLGLSLMLEVMPIEMPTIWGMKIDLVAVPIVMVYLLVGFTGGLIALFLLFVGLSIISPSSWLGASM
KATATLAVLVGLEIAKRATRFDIESASPNRIVLLAIVGFLAGIAIRIPLMVALNYYYALPIWLGVPREAVISTVEEWTGV
PFWVAIGLPNAVQSAIDVFVGLAATLPVLRSLPHLLE

Sequences:

>Translated_197_residues
MRSLKPKEIAVIGIMLGLSLMLEVMPIEMPTIWGMKIDLVAVPIVMVYLLVGFTGGLIALFLLFVGLSIISPSSWLGASM
KATATLAVLVGLEIAKRATRFDIESASPNRIVLLAIVGFLAGIAIRIPLMVALNYYYALPIWLGVPREAVISTVEEWTGV
PFWVAIGLPNAVQSAIDVFVGLAATLPVLRSLPHLLE
>Mature_197_residues
MRSLKPKEIAVIGIMLGLSLMLEVMPIEMPTIWGMKIDLVAVPIVMVYLLVGFTGGLIALFLLFVGLSIISPSSWLGASM
KATATLAVLVGLEIAKRATRFDIESASPNRIVLLAIVGFLAGIAIRIPLMVALNYYYALPIWLGVPREAVISTVEEWTGV
PFWVAIGLPNAVQSAIDVFVGLAATLPVLRSLPHLLE

Specific function: Unknown

COG id: COG3601

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21192; Mature: 21192

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLKPKEIAVIGIMLGLSLMLEVMPIEMPTIWGMKIDLVAVPIVMVYLLVGFTGGLIAL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FLLFVGLSIISPSSWLGASMKATATLAVLVGLEIAKRATRFDIESASPNRIVLLAIVGFL
HHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
AGIAIRIPLMVALNYYYALPIWLGVPREAVISTVEEWTGVPFWVAIGLPNAVQSAIDVFV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
GLAATLPVLRSLPHLLE
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSLKPKEIAVIGIMLGLSLMLEVMPIEMPTIWGMKIDLVAVPIVMVYLLVGFTGGLIAL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FLLFVGLSIISPSSWLGASMKATATLAVLVGLEIAKRATRFDIESASPNRIVLLAIVGFL
HHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
AGIAIRIPLMVALNYYYALPIWLGVPREAVISTVEEWTGVPFWVAIGLPNAVQSAIDVFV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
GLAATLPVLRSLPHLLE
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA