| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224591
Identifier: 212224591
GI number: 212224591
Start: 1316485
End: 1317078
Strand: Reverse
Name: 212224591
Synonym: TON_1440
Alternate gene names: NA
Gene position: 1317078-1316485 (Counterclockwise)
Preceding gene: 212224596
Following gene: 212224587
Centisome position: 71.29
GC content: 54.55
Gene sequence:
>594_bases ATGAGGAGTCTCAAGCCCAAGGAGATAGCGGTAATAGGAATTATGCTCGGTCTTTCGCTGATGCTTGAGGTCATGCCAAT AGAGATGCCCACCATATGGGGCATGAAGATAGACCTCGTTGCAGTCCCGATAGTTATGGTCTACCTCCTCGTGGGTTTCA CCGGAGGACTGATAGCGCTTTTCCTGCTCTTCGTTGGGCTGAGTATAATTTCCCCGTCAAGCTGGCTCGGAGCCAGTATG AAGGCCACCGCGACCCTGGCGGTTCTGGTTGGCCTTGAAATAGCGAAGAGAGCAACGCGCTTTGACATCGAGAGTGCATC CCCAAACAGAATTGTCCTCTTAGCCATCGTCGGCTTTCTCGCCGGAATAGCCATCAGGATACCTCTCATGGTGGCTCTCA ACTACTACTACGCCCTCCCCATATGGCTCGGCGTTCCGAGGGAGGCAGTGATAAGCACCGTTGAGGAGTGGACGGGTGTT CCCTTCTGGGTTGCGATAGGGCTTCCAAACGCGGTACAGAGCGCCATTGACGTTTTCGTTGGTCTGGCGGCAACGCTGCC CGTGTTGAGGTCACTTCCCCATCTCCTTGAGTAG
Upstream 100 bases:
>100_bases CCGGTTTTTAAGGATTCTTTTGGAGGTTGTCCTCGCGAGTGTTTCATATTGGGAACAAAAATTTATAAATTGTGGAACAA ACTTCGGGCTGGTGATGAGG
Downstream 100 bases:
>100_bases CCGGGGAATGTTCTCTGGCTCTAGTCCTCTTTCTTTTAGATATTCGTTCCACTTCTTCGCGTACTCCAGGAAGGTCTCGT CGCCTGTTTTCATGTAGAGC
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRSLKPKEIAVIGIMLGLSLMLEVMPIEMPTIWGMKIDLVAVPIVMVYLLVGFTGGLIALFLLFVGLSIISPSSWLGASM KATATLAVLVGLEIAKRATRFDIESASPNRIVLLAIVGFLAGIAIRIPLMVALNYYYALPIWLGVPREAVISTVEEWTGV PFWVAIGLPNAVQSAIDVFVGLAATLPVLRSLPHLLE
Sequences:
>Translated_197_residues MRSLKPKEIAVIGIMLGLSLMLEVMPIEMPTIWGMKIDLVAVPIVMVYLLVGFTGGLIALFLLFVGLSIISPSSWLGASM KATATLAVLVGLEIAKRATRFDIESASPNRIVLLAIVGFLAGIAIRIPLMVALNYYYALPIWLGVPREAVISTVEEWTGV PFWVAIGLPNAVQSAIDVFVGLAATLPVLRSLPHLLE >Mature_197_residues MRSLKPKEIAVIGIMLGLSLMLEVMPIEMPTIWGMKIDLVAVPIVMVYLLVGFTGGLIALFLLFVGLSIISPSSWLGASM KATATLAVLVGLEIAKRATRFDIESASPNRIVLLAIVGFLAGIAIRIPLMVALNYYYALPIWLGVPREAVISTVEEWTGV PFWVAIGLPNAVQSAIDVFVGLAATLPVLRSLPHLLE
Specific function: Unknown
COG id: COG3601
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21192; Mature: 21192
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLKPKEIAVIGIMLGLSLMLEVMPIEMPTIWGMKIDLVAVPIVMVYLLVGFTGGLIAL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLLFVGLSIISPSSWLGASMKATATLAVLVGLEIAKRATRFDIESASPNRIVLLAIVGFL HHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH AGIAIRIPLMVALNYYYALPIWLGVPREAVISTVEEWTGVPFWVAIGLPNAVQSAIDVFV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH GLAATLPVLRSLPHLLE HHHHHHHHHHHHHHHCC >Mature Secondary Structure MRSLKPKEIAVIGIMLGLSLMLEVMPIEMPTIWGMKIDLVAVPIVMVYLLVGFTGGLIAL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLLFVGLSIISPSSWLGASMKATATLAVLVGLEIAKRATRFDIESASPNRIVLLAIVGFL HHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH AGIAIRIPLMVALNYYYALPIWLGVPREAVISTVEEWTGVPFWVAIGLPNAVQSAIDVFV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH GLAATLPVLRSLPHLLE HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA