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The map label for this gene is ybhR [C]

Identifier: 212224498

GI number: 212224498

Start: 1217677

End: 1218954

Strand: Reverse

Name: ybhR [C]

Synonym: TON_1347

Alternate gene names: 212224498

Gene position: 1218954-1217677 (Counterclockwise)

Preceding gene: 212224499

Following gene: 212224496

Centisome position: 65.97

GC content: 52.97

Gene sequence:

>1278_bases
ATGAGCGACTTCTGGGTGATGGCGAAGAAAGAACTCAGGAACCTCTTCAGGGACAGGAAGCTTATCTTCGGTCTTGTGGT
TATACCTCTCATCCTGTTCCCGGTCATGGGCAAGGTAATAACCCTTGGGCTGGAGCAGGCACAGGGCGAGACGAAGGTCG
CCATAGTGGACTTCGACGAGGGAGGGTACGGTGAAGTTCTGATAAAGGCCCTTGAGGTAACTCCAAACATAACTGTCGCG
GTCATCAACGCAACATCCCTGGATGAAGCCCTTCAGAAGGCAGTTCTGGAGAAGCAGAACGTTCTTGTAGTGATCCCTCC
AGACTTTTCGACGAGGCTTGAAGAAAACGAGAAAGCTACAGTTCAAATTTACGGTATCTTCACGACAATCGGTGCGGGTA
TAAAGGAGAGCGTCAGTGAGGGCAGGATAAACGCCGTTATCGGAGTTCTAAGCGATGGGATAGCCCGGATAAAGATTGAG
CAGCTCGGGGCTGGAAATCCAGACGCGATACTTCGGCCGATAGAGACAGAGAGCAAATCTGTCATCAGGGGTAAGATAGT
TGACATCCAGCCGAGCATAGTCTCGAACGTCATAGCCTCACAGGCCTTCTCAATACCTATGATAGTCTTCCTTATGGTGA
TGGTCACCGCCCAGATGGCTGCCGGGGCGATGGCGGCCGAAAAGGAGAACAAAACCCTTGAGACGCTCCTGACCCTTCCC
GTTGCCAGAACAAAGATAGTAGGTGCCAAGATCTTTGGAACCGCCGTCATGGGTCTGATGGCGGCGATAGCCTACATGAT
AGGAATGCGCAGCTACCTCGGCTCCTTCGGTCTGGGGGCGACGGGCATAACCCTCGAAGACATTGGTCTCAGCGTGACGC
CGATGGGGATGCTCCTCTTCGCCCTCGTCGTCTTCCTGACCATAATATTCTCCCTCAGCTTGGCGATGATACTCGCAATC
TTCGCGGAAGACGTGCAGAGCGCCACAACGGTGGTGAGCGCAGTGATAATGCCCCTTGCCTTTCCTGCGTTCCTCCTTAT
GTACACTGACATCAGCGACCTGCCAGTGGCCATCAAGTATGTCCTGCTGGCGATTCCGTTCACACACCCGATAGTGGACT
ACCGCTACATCCTCCTTGGTGACTACGGTTCAGTATTTCTTAGCGTGGGGTATCTTGCCTTAATGGCCGGACTGACGCTC
TACGTTACCGCGTGGATATTCTCAACGGAGAAGGTTATGACGGCAAAAATAAGCTGGGGAAGGAAGAAGATGGGGTGA

Upstream 100 bases:

>100_bases
CGGCCGAGCTCAAGGAGAAGTACGGCGCTGAGAACCTCGAAGAGGTCTTCATGAGGGCTGTGGGGGCGGAAATCAATGAA
CCCGTTGGGGGTGAGGGCTC

Downstream 100 bases:

>100_bases
GCCTTTCTTTTTATTCTATAGGTACTCCATCTTTTGTCCTCGGTGCGAGCCACTTCATGAGCCTCTGCGGATCTTTGGTA
CGGATGATTATTGTTATCGG

Product: ABC-type sodium efflux pump system, permease component

Products: NA

Alternate protein names: ABC-Type Na+ Efflux Pump Permease Component-Like Protein; ABC-Type Sodium Efflux Pump System Permease Component; ABC-2 Type Transporter Family; ABC Transporter; ABC Transporter Permease

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSDFWVMAKKELRNLFRDRKLIFGLVVIPLILFPVMGKVITLGLEQAQGETKVAIVDFDEGGYGEVLIKALEVTPNITVA
VINATSLDEALQKAVLEKQNVLVVIPPDFSTRLEENEKATVQIYGIFTTIGAGIKESVSEGRINAVIGVLSDGIARIKIE
QLGAGNPDAILRPIETESKSVIRGKIVDIQPSIVSNVIASQAFSIPMIVFLMVMVTAQMAAGAMAAEKENKTLETLLTLP
VARTKIVGAKIFGTAVMGLMAAIAYMIGMRSYLGSFGLGATGITLEDIGLSVTPMGMLLFALVVFLTIIFSLSLAMILAI
FAEDVQSATTVVSAVIMPLAFPAFLLMYTDISDLPVAIKYVLLAIPFTHPIVDYRYILLGDYGSVFLSVGYLALMAGLTL
YVTAWIFSTEKVMTAKISWGRKKMG

Sequences:

>Translated_425_residues
MSDFWVMAKKELRNLFRDRKLIFGLVVIPLILFPVMGKVITLGLEQAQGETKVAIVDFDEGGYGEVLIKALEVTPNITVA
VINATSLDEALQKAVLEKQNVLVVIPPDFSTRLEENEKATVQIYGIFTTIGAGIKESVSEGRINAVIGVLSDGIARIKIE
QLGAGNPDAILRPIETESKSVIRGKIVDIQPSIVSNVIASQAFSIPMIVFLMVMVTAQMAAGAMAAEKENKTLETLLTLP
VARTKIVGAKIFGTAVMGLMAAIAYMIGMRSYLGSFGLGATGITLEDIGLSVTPMGMLLFALVVFLTIIFSLSLAMILAI
FAEDVQSATTVVSAVIMPLAFPAFLLMYTDISDLPVAIKYVLLAIPFTHPIVDYRYILLGDYGSVFLSVGYLALMAGLTL
YVTAWIFSTEKVMTAKISWGRKKMG
>Mature_424_residues
SDFWVMAKKELRNLFRDRKLIFGLVVIPLILFPVMGKVITLGLEQAQGETKVAIVDFDEGGYGEVLIKALEVTPNITVAV
INATSLDEALQKAVLEKQNVLVVIPPDFSTRLEENEKATVQIYGIFTTIGAGIKESVSEGRINAVIGVLSDGIARIKIEQ
LGAGNPDAILRPIETESKSVIRGKIVDIQPSIVSNVIASQAFSIPMIVFLMVMVTAQMAAGAMAAEKENKTLETLLTLPV
ARTKIVGAKIFGTAVMGLMAAIAYMIGMRSYLGSFGLGATGITLEDIGLSVTPMGMLLFALVVFLTIIFSLSLAMILAIF
AEDVQSATTVVSAVIMPLAFPAFLLMYTDISDLPVAIKYVLLAIPFTHPIVDYRYILLGDYGSVFLSVGYLALMAGLTLY
VTAWIFSTEKVMTAKISWGRKKMG

Specific function: Unknown

COG id: COG1668

COG function: function code CP; ABC-type Na+ efflux pump, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45846; Mature: 45715

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFWVMAKKELRNLFRDRKLIFGLVVIPLILFPVMGKVITLGLEQAQGETKVAIVDFDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC
GGYGEVLIKALEVTPNITVAVINATSLDEALQKAVLEKQNVLVVIPPDFSTRLEENEKAT
CCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCEE
VQIYGIFTTIGAGIKESVSEGRINAVIGVLSDGIARIKIEQLGAGNPDAILRPIETESKS
EEEEEEHHHHCCCHHHHHHCCHHHHHHHHHHCCCEEEEEHHCCCCCCCCEECCCCCCCCH
VIRGKIVDIQPSIVSNVIASQAFSIPMIVFLMVMVTAQMAAGAMAAEKENKTLETLLTLP
HHEEEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VARTKIVGAKIFGTAVMGLMAAIAYMIGMRSYLGSFGLGATGITLEDIGLSVTPMGMLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHH
ALVVFLTIIFSLSLAMILAIFAEDVQSATTVVSAVIMPLAFPAFLLMYTDISDLPVAIKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VLLAIPFTHPIVDYRYILLGDYGSVFLSVGYLALMAGLTLYVTAWIFSTEKVMTAKISWG
HHHHCCCCCCHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCC
RKKMG
CCCCC
>Mature Secondary Structure 
SDFWVMAKKELRNLFRDRKLIFGLVVIPLILFPVMGKVITLGLEQAQGETKVAIVDFDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC
GGYGEVLIKALEVTPNITVAVINATSLDEALQKAVLEKQNVLVVIPPDFSTRLEENEKAT
CCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCEE
VQIYGIFTTIGAGIKESVSEGRINAVIGVLSDGIARIKIEQLGAGNPDAILRPIETESKS
EEEEEEHHHHCCCHHHHHHCCHHHHHHHHHHCCCEEEEEHHCCCCCCCCEECCCCCCCCH
VIRGKIVDIQPSIVSNVIASQAFSIPMIVFLMVMVTAQMAAGAMAAEKENKTLETLLTLP
HHEEEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VARTKIVGAKIFGTAVMGLMAAIAYMIGMRSYLGSFGLGATGITLEDIGLSVTPMGMLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHH
ALVVFLTIIFSLSLAMILAIFAEDVQSATTVVSAVIMPLAFPAFLLMYTDISDLPVAIKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VLLAIPFTHPIVDYRYILLGDYGSVFLSVGYLALMAGLTLYVTAWIFSTEKVMTAKISWG
HHHHCCCCCCHHCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCC
RKKMG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA