Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

Click here to switch to the map view.

The map label for this gene is 212224491

Identifier: 212224491

GI number: 212224491

Start: 1212183

End: 1212821

Strand: Reverse

Name: 212224491

Synonym: TON_1340

Alternate gene names: NA

Gene position: 1212821-1212183 (Counterclockwise)

Preceding gene: 212224493

Following gene: 212224490

Centisome position: 65.64

GC content: 48.2

Gene sequence:

>639_bases
ATGGACACTTCCGTCTTTGAGAAATATCTCTTTGGTAAGGCCAACAGAGGAGACATTATTCTTGTGGAGTATCCATCAAC
ATATCCTGTAGAGGAGTTCTCGTGGAGTTTCCTGATTCCGGCACTTGTTGAGAGGGGTGGGGTTGTTATAGGTGACTTCT
TTGGCATTGGTGATCTTATGTTCCGGAAATACACCCGTAAGGTGTCCGGTAAGGGATACTCAAAGATAATCGAGCTCATC
AAGGAAATTAAGATTGTCAAGATCGGTCCGGGCTCAGCCAGTTACGGCGAGGTGATAGAAGAAGTTGTGCCCGTCTATGA
CTCTCACAGCTTCCTGAAGAACTACCACACGGTCATTAACAAGATGACGCACTTCCCCACCAAGCCGGAGTACTTCGTAA
CCTTTGGGATTGCCCTCTACGTCCACTTTGGGGGAGATGAGGCTGTGAAAGCAATACTCACGAGCATCAGCACCATCCCT
CTGGAGGAGTGGGTTGGAATCCATTTCATCAACGTCGACATTTTAAGCAGGGAGCACGTAGCGATGCTCGAGGAGATGGC
CTCGATGGTTTTCTACATATCAAAAGATGGCCTGATAGTAAAGAAGGGCGGTGAGGCATTTGATTCGGGAGGGGGATAA

Upstream 100 bases:

>100_bases
GCCTTGCATCGAGCTCGTTGGGCCACACTACGAACTTTCTCATCCCTTCCACCTAAAAGGTTTAAAAGAGGAGCGGTTAA
AAACCCTTTTGGTGAGCCCT

Downstream 100 bases:

>100_bases
GGTACTGCTGATAGATAGGAGGGGGAAGAGGTACCTCGTAACGGTCTCGAATAGGGAGTTCCACACGGATTTGGGTATAA
TCAACCTTGGGGAGCTTCTC

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MDTSVFEKYLFGKANRGDIILVEYPSTYPVEEFSWSFLIPALVERGGVVIGDFFGIGDLMFRKYTRKVSGKGYSKIIELI
KEIKIVKIGPGSASYGEVIEEVVPVYDSHSFLKNYHTVINKMTHFPTKPEYFVTFGIALYVHFGGDEAVKAILTSISTIP
LEEWVGIHFINVDILSREHVAMLEEMASMVFYISKDGLIVKKGGEAFDSGGG

Sequences:

>Translated_212_residues
MDTSVFEKYLFGKANRGDIILVEYPSTYPVEEFSWSFLIPALVERGGVVIGDFFGIGDLMFRKYTRKVSGKGYSKIIELI
KEIKIVKIGPGSASYGEVIEEVVPVYDSHSFLKNYHTVINKMTHFPTKPEYFVTFGIALYVHFGGDEAVKAILTSISTIP
LEEWVGIHFINVDILSREHVAMLEEMASMVFYISKDGLIVKKGGEAFDSGGG
>Mature_212_residues
MDTSVFEKYLFGKANRGDIILVEYPSTYPVEEFSWSFLIPALVERGGVVIGDFFGIGDLMFRKYTRKVSGKGYSKIIELI
KEIKIVKIGPGSASYGEVIEEVVPVYDSHSFLKNYHTVINKMTHFPTKPEYFVTFGIALYVHFGGDEAVKAILTSISTIP
LEEWVGIHFINVDILSREHVAMLEEMASMVFYISKDGLIVKKGGEAFDSGGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23669; Mature: 23669

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSVFEKYLFGKANRGDIILVEYPSTYPVEEFSWSFLIPALVERGGVVIGDFFGIGDLM
CCHHHHHHHHCCCCCCCCEEEEECCCCCCHHHCCHHHHHHHHHHCCCEEEEHHHHHHHHH
FRKYTRKVSGKGYSKIIELIKEIKIVKIGPGSASYGEVIEEVVPVYDSHSFLKNYHTVIN
HHHHHHHHCCCCHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
KMTHFPTKPEYFVTFGIALYVHFGGDEAVKAILTSISTIPLEEWVGIHFINVDILSREHV
HHHCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCHHHCCCEEEEEEEEECHHHH
AMLEEMASMVFYISKDGLIVKKGGEAFDSGGG
HHHHHHHHHHEEECCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MDTSVFEKYLFGKANRGDIILVEYPSTYPVEEFSWSFLIPALVERGGVVIGDFFGIGDLM
CCHHHHHHHHCCCCCCCCEEEEECCCCCCHHHCCHHHHHHHHHHCCCEEEEHHHHHHHHH
FRKYTRKVSGKGYSKIIELIKEIKIVKIGPGSASYGEVIEEVVPVYDSHSFLKNYHTVIN
HHHHHHHHCCCCHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
KMTHFPTKPEYFVTFGIALYVHFGGDEAVKAILTSISTIPLEEWVGIHFINVDILSREHV
HHHCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCHHHCCCEEEEEEEEECHHHH
AMLEEMASMVFYISKDGLIVKKGGEAFDSGGG
HHHHHHHHHHEEECCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA