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The map label for this gene is yvdE [H]

Identifier: 212224443

GI number: 212224443

Start: 1174861

End: 1175694

Strand: Reverse

Name: yvdE [H]

Synonym: TON_1973

Alternate gene names: 212224443

Gene position: 1175694-1174861 (Counterclockwise)

Preceding gene: 212224445

Following gene: 212224441

Centisome position: 63.63

GC content: 51.32

Gene sequence:

>834_bases
ATGAAGCCTCTGATAGGTATAATCGGTCAGGTAGACCATTCCAGAAATCGCATTTTTCTCGATAAAATGCACTTGGAGAA
AGTGATTAAGGCAGGGGGCATTCCTGCGGTTTTCACTGCGGATTCCTCTCCGGAGGAGGTTCTGGAGCACGCCGACGGAA
TCCTCCTCATCGAGGGCCCCGACGTTCATCCCCATTTCTACGGTGAGGATCCATCAAGTTCCATCAAGTATGTGGATGTT
GAAAGGGACGAATTTGAGATATGCCTCGTAAAAAAAGCTATTGAAAAGGGTGTGCCGATTCTTGGCATCGGACGTGGAAT
GCAAGTTATAAACGTTGCCCTGGGTGGAACTCTGTATCAGGATCTAACGGAGATTCCTAAAGCCATCAAGCATGACTGGG
ATCTGAACATTATCGGTCCGACCCAGCGTGTTCACGGAGTAAGGATAAAGATGAGCTCGAAGCTCTATGAGATTCTCAAG
GACGAGCTCAGCATAGAGGGCACCAATGAGGTTTATCTGCGCGTCAACAGCTTCCATCACCAGGCCATCAAGAGGGTTGG
TGAGGGAATAAAGCCCGTTGCCTACGCCGTCGACGGCCTCATCGAGGCGATTGAGGCAGAGGAGAGCTTTGTGATTGGCG
TCCAGTGGCAGGCGGAGCATTTGCCCGAAATGGGGCGGCTTTTCGAGGCTTTTGTACTGGCTGCTGCAGAATACCGTGCC
AAAAAGCGGGAGATGGAAAGGCTGGAGATAGAGGCAGAGGTCAGAGAGGAACTAGATGAGAACCGTCGCAGCTCGGATAC
GACCGATAACCTTCCCGACACGAGCCAAACGTAA

Upstream 100 bases:

>100_bases
GAGTCATAGAAGAGGAAATAAAGGCTATCAAGGACTGATTCTATCCTTTTCCGTAAACCTTTTTATACTTCCTTCCTCAA
CTTCTTTCTAGGTGGTCGCT

Downstream 100 bases:

>100_bases
TACCCTTTTCGGTTATTTTTCTCTCCGCCTCTTGAAGGATCTTCATTCTAAGCTCCCTTGGAAGGTAGTAATATCCTCCT
ATCCGCTCACCTTTTTCATA

Product: glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKPLIGIIGQVDHSRNRIFLDKMHLEKVIKAGGIPAVFTADSSPEEVLEHADGILLIEGPDVHPHFYGEDPSSSIKYVDV
ERDEFEICLVKKAIEKGVPILGIGRGMQVINVALGGTLYQDLTEIPKAIKHDWDLNIIGPTQRVHGVRIKMSSKLYEILK
DELSIEGTNEVYLRVNSFHHQAIKRVGEGIKPVAYAVDGLIEAIEAEESFVIGVQWQAEHLPEMGRLFEAFVLAAAEYRA
KKREMERLEIEAEVREELDENRRSSDTTDNLPDTSQT

Sequences:

>Translated_277_residues
MKPLIGIIGQVDHSRNRIFLDKMHLEKVIKAGGIPAVFTADSSPEEVLEHADGILLIEGPDVHPHFYGEDPSSSIKYVDV
ERDEFEICLVKKAIEKGVPILGIGRGMQVINVALGGTLYQDLTEIPKAIKHDWDLNIIGPTQRVHGVRIKMSSKLYEILK
DELSIEGTNEVYLRVNSFHHQAIKRVGEGIKPVAYAVDGLIEAIEAEESFVIGVQWQAEHLPEMGRLFEAFVLAAAEYRA
KKREMERLEIEAEVREELDENRRSSDTTDNLPDTSQT
>Mature_277_residues
MKPLIGIIGQVDHSRNRIFLDKMHLEKVIKAGGIPAVFTADSSPEEVLEHADGILLIEGPDVHPHFYGEDPSSSIKYVDV
ERDEFEICLVKKAIEKGVPILGIGRGMQVINVALGGTLYQDLTEIPKAIKHDWDLNIIGPTQRVHGVRIKMSSKLYEILK
DELSIEGTNEVYLRVNSFHHQAIKRVGEGIKPVAYAVDGLIEAIEAEESFVIGVQWQAEHLPEMGRLFEAFVLAAAEYRA
KKREMERLEIEAEVREELDENRRSSDTTDNLPDTSQT

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=262, Percent_Identity=32.0610687022901, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 31088; Mature: 31088

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLIGIIGQVDHSRNRIFLDKMHLEKVIKAGGIPAVFTADSSPEEVLEHADGILLIEGP
CCCHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCEEEEECC
DVHPHFYGEDPSSSIKYVDVERDEFEICLVKKAIEKGVPILGIGRGMQVINVALGGTLYQ
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCEEEHHHHCCHHHH
DLTEIPKAIKHDWDLNIIGPTQRVHGVRIKMSSKLYEILKDELSIEGTNEVYLRVNSFHH
HHHHHHHHHCCCCCEEEECCCCHHCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH
QAIKRVGEGIKPVAYAVDGLIEAIEAEESFVIGVQWQAEHLPEMGRLFEAFVLAAAEYRA
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHCHHHHHHHHHHHHHHHHHHH
KKREMERLEIEAEVREELDENRRSSDTTDNLPDTSQT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPLIGIIGQVDHSRNRIFLDKMHLEKVIKAGGIPAVFTADSSPEEVLEHADGILLIEGP
CCCHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCEEEEECC
DVHPHFYGEDPSSSIKYVDVERDEFEICLVKKAIEKGVPILGIGRGMQVINVALGGTLYQ
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCEEEHHHHCCHHHH
DLTEIPKAIKHDWDLNIIGPTQRVHGVRIKMSSKLYEILKDELSIEGTNEVYLRVNSFHH
HHHHHHHHHCCCCCEEEECCCCHHCEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH
QAIKRVGEGIKPVAYAVDGLIEAIEAEESFVIGVQWQAEHLPEMGRLFEAFVLAAAEYRA
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHCHHHHHHHHHHHHHHHHHHH
KKREMERLEIEAEVREELDENRRSSDTTDNLPDTSQT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]