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The map label for this gene is ychE [C]

Identifier: 212224440

GI number: 212224440

Start: 1172944

End: 1173585

Strand: Reverse

Name: ychE [C]

Synonym: TON_1291

Alternate gene names: 212224440

Gene position: 1173585-1172944 (Counterclockwise)

Preceding gene: 212224441

Following gene: 212224439

Centisome position: 63.52

GC content: 51.71

Gene sequence:

>642_bases
GTGATAGAGCTCCTCAAGCACTTTGTCATACTCTACGGTGGCCTCTTTGCGATAACGAATCCCGTTGGAGCGGTGCCAGT
CTTCCTAGGCGTCACTCACGACCTTTCATGGAGCGAGAGAAGAGAGATAGCAAGGAAAACTACCATAACGGTAGTGGTAA
CGCTCGTAACCTTTGCCCTCATCGGCCAGTGGATATTTCGGTTCTTCGGCTCTAGTATAGATGCCTTCGCCATAGCCGGC
GGCATTCTTCTCTTCCGAATGGCCATGGACATGCTCTCAGGAAGACTCTCTTCAATCAAGATAAGCCGGGAAGAAACAGA
GGAGTTCGACGAGGAAGTGGTGACCCTTGAGGAGGTTGCGATAATCCCCCTTGCCATCCCGCTGATCTCCGGTCCGGGTG
CGATAACGACGGTGATGATTTACACCGCCAAGAGCATTAGTCTTCCGGAGAAAGTGACGGTCATAGCCAGCATAATGGCA
ATAGGTCTCACGGTATGGCTCGTCCTGTGCTCGGCTAACAAGATCAAAACCAAACTCGGGAGGGTCGGAATCAAGGTCAT
GACGAGGATGATGGGTCTCATACTAACGTCCATGGCCGTTCAGATGATAATAAACGGCATAAAAGGCGCCTTCGGCCTCT
GA

Upstream 100 bases:

>100_bases
GCCCACATAAAGCTCAGTGGGGCGGAGCTTACGTACTCTTTCGAGATTATCAAGAGTTAGCTTTTTAACCTCTTTTCTTT
CAGCCGCCGAGGGTGGTAAA

Downstream 100 bases:

>100_bases
GGAAGACTTTTAAGCTCCTTCTCCAACTTTTTTCGGTGGTTGTATGAGAGGAGATTTGATCAGGGTTCTAAGCCTGATTG
AGGAGAAGGCCAACGAGCTA

Product: small neutral amino acid transporter A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MIELLKHFVILYGGLFAITNPVGAVPVFLGVTHDLSWSERREIARKTTITVVVTLVTFALIGQWIFRFFGSSIDAFAIAG
GILLFRMAMDMLSGRLSSIKISREETEEFDEEVVTLEEVAIIPLAIPLISGPGAITTVMIYTAKSISLPEKVTVIASIMA
IGLTVWLVLCSANKIKTKLGRVGIKVMTRMMGLILTSMAVQMIINGIKGAFGL

Sequences:

>Translated_213_residues
MIELLKHFVILYGGLFAITNPVGAVPVFLGVTHDLSWSERREIARKTTITVVVTLVTFALIGQWIFRFFGSSIDAFAIAG
GILLFRMAMDMLSGRLSSIKISREETEEFDEEVVTLEEVAIIPLAIPLISGPGAITTVMIYTAKSISLPEKVTVIASIMA
IGLTVWLVLCSANKIKTKLGRVGIKVMTRMMGLILTSMAVQMIINGIKGAFGL
>Mature_213_residues
MIELLKHFVILYGGLFAITNPVGAVPVFLGVTHDLSWSERREIARKTTITVVVTLVTFALIGQWIFRFFGSSIDAFAIAG
GILLFRMAMDMLSGRLSSIKISREETEEFDEEVVTLEEVAIIPLAIPLISGPGAITTVMIYTAKSISLPEKVTVIASIMA
IGLTVWLVLCSANKIKTKLGRVGIKVMTRMMGLILTSMAVQMIINGIKGAFGL

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=214, Percent_Identity=34.1121495327103, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1789842, Length=200, Percent_Identity=31, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1787809, Length=215, Percent_Identity=27.906976744186, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 23148; Mature: 23148

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELLKHFVILYGGLFAITNPVGAVPVFLGVTHDLSWSERREIARKTTITVVVTLVTFAL
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IGQWIFRFFGSSIDAFAIAGGILLFRMAMDMLSGRLSSIKISREETEEFDEEVVTLEEVA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHEEECHHHHHHHHHHHHHHHHHH
IIPLAIPLISGPGAITTVMIYTAKSISLPEKVTVIASIMAIGLTVWLVLCSANKIKTKLG
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RVGIKVMTRMMGLILTSMAVQMIINGIKGAFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIELLKHFVILYGGLFAITNPVGAVPVFLGVTHDLSWSERREIARKTTITVVVTLVTFAL
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IGQWIFRFFGSSIDAFAIAGGILLFRMAMDMLSGRLSSIKISREETEEFDEEVVTLEEVA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHEEECHHHHHHHHHHHHHHHHHH
IIPLAIPLISGPGAITTVMIYTAKSISLPEKVTVIASIMAIGLTVWLVLCSANKIKTKLG
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RVGIKVMTRMMGLILTSMAVQMIINGIKGAFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]