| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224369
Identifier: 212224369
GI number: 212224369
Start: 1114580
End: 1115863
Strand: Reverse
Name: 212224369
Synonym: TON_1220
Alternate gene names: NA
Gene position: 1115863-1114580 (Counterclockwise)
Preceding gene: 212224371
Following gene: 212224368
Centisome position: 60.4
GC content: 49.92
Gene sequence:
>1284_bases ATGCTAGTTAAGGAGATACTCGACTCTGTTGAAATAATTCAGGATCCCTATATCAAATCGATTACCTACGCTAAAATCGG CGAGAGGCTGGCAAAGGCGAAGGACAACAACTACAAGACTGCCTTTTTGAGGGCCGTGGAGACTACAAAGGAAATCGACG AGCCTGTTAAAATGTTCCGAGCACTTCTCTCGGTTGGCTACTCTCTCAGCAAGGCTGGCCTCAAATCCGCCAAGAGGATA TACCAAGAGGTCCTCGAGGATTCCCGCGTTCTTCCAGCTCCTCAGCGGGATTTAATAATGCAGAGCGCTGCCACTTACAT GCTTTTCCTCGGCGAAATAGGTGAGGCCGTGACGTATGCCCTCGAAATCAGTAATAGGAAGCTTAGGAACGAGGTTTTAC TAGAAATAATACGCACTAACACCCGGATGATTGGAAAAGAGCAGCTGAAAGTCGCTTACCGCCTCAGGAGAAGTAAGCTT GCCCTGGAGTATATTGATTCTGAACCCTATCGCTCCAAGGCCCTTCTTGAGCTGATTAAGGCCTATATGATTCTTGGAAG CTATGAGAACGGGATAACCCTCATCAGAGGAATCAGTGTTAAAGAGTGGGCTAGACAGGCCTTTAAGGAGGTTTCCTTCT ACCTGAAGGATAAGGAGGTTCTTGGCCATTACATAGATTCTCTCGAGGAGGTGGCCAACGAGCTCATAGACCGCTTTGGG AAGGAGTTCACTGTGGAGCTTGCCCTTGCTTTTGCCCTCACCGGTGAGGGTATTCCGGCTGTCAAGCTCATCAGGCGTCT CGAGGACAGTGAGTCGCTTCTCGTGAAGATGGCTCTGGAACTTCTGGAAAGAGACCATGACGTCCTTCCTAAGTTCATAT CCGCGCTGAATGAAGAGGAAGCGGATGCTGTTGGTAAGGCTGTGATGAACAGGATCCTCGAGAGGCCGGAAAAGGGGAGC TGGGAAATCGTTAATGCAATAGGGAAGAGCACACCAAGCGAAGAAGTATGGGCCAAGATAGCCCGTTACTACGTCCTCGT TGGGAAGCTCGAGGGAGCAATGAAAGTTGGGACACTCATCCAGGACAGAAAGCTTCGCTCAATAGTGATGGCGGACATAG CCCATCATCTGGTCAAGAATGGTGAGGTTGAGAAGGCCATTGACGCCGCCGTTGAAGTCAGGGATCCAAAGTTCTCTTCA GTACTCATCTCGGAGATACTCATCAAAGCGCTTGAGCGTGAGCTTCCGGGGAGGGTTAGGTCATGGAACGGCTCAAAGCA CTGA
Upstream 100 bases:
>100_bases TCAAACTCTTAAAAAAGTTCCGAGGGTTAGGTTTAATAACATCGAACGTGTATTTTTGGTGAAATGAGCCCCGGGTAATT TACTCTTACGGGTGAAGGAT
Downstream 100 bases:
>100_bases TCGGGCGGAAGGAGAGTAAAGTTGAGTTCATAGGCGACTTCATAACCCTTCTCCTAACCGACAATGATGTTTACTCGGAC GAACTTCTGTTCAGGGACGC
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MLVKEILDSVEIIQDPYIKSITYAKIGERLAKAKDNNYKTAFLRAVETTKEIDEPVKMFRALLSVGYSLSKAGLKSAKRI YQEVLEDSRVLPAPQRDLIMQSAATYMLFLGEIGEAVTYALEISNRKLRNEVLLEIIRTNTRMIGKEQLKVAYRLRRSKL ALEYIDSEPYRSKALLELIKAYMILGSYENGITLIRGISVKEWARQAFKEVSFYLKDKEVLGHYIDSLEEVANELIDRFG KEFTVELALAFALTGEGIPAVKLIRRLEDSESLLVKMALELLERDHDVLPKFISALNEEEADAVGKAVMNRILERPEKGS WEIVNAIGKSTPSEEVWAKIARYYVLVGKLEGAMKVGTLIQDRKLRSIVMADIAHHLVKNGEVEKAIDAAVEVRDPKFSS VLISEILIKALERELPGRVRSWNGSKH
Sequences:
>Translated_427_residues MLVKEILDSVEIIQDPYIKSITYAKIGERLAKAKDNNYKTAFLRAVETTKEIDEPVKMFRALLSVGYSLSKAGLKSAKRI YQEVLEDSRVLPAPQRDLIMQSAATYMLFLGEIGEAVTYALEISNRKLRNEVLLEIIRTNTRMIGKEQLKVAYRLRRSKL ALEYIDSEPYRSKALLELIKAYMILGSYENGITLIRGISVKEWARQAFKEVSFYLKDKEVLGHYIDSLEEVANELIDRFG KEFTVELALAFALTGEGIPAVKLIRRLEDSESLLVKMALELLERDHDVLPKFISALNEEEADAVGKAVMNRILERPEKGS WEIVNAIGKSTPSEEVWAKIARYYVLVGKLEGAMKVGTLIQDRKLRSIVMADIAHHLVKNGEVEKAIDAAVEVRDPKFSS VLISEILIKALERELPGRVRSWNGSKH >Mature_427_residues MLVKEILDSVEIIQDPYIKSITYAKIGERLAKAKDNNYKTAFLRAVETTKEIDEPVKMFRALLSVGYSLSKAGLKSAKRI YQEVLEDSRVLPAPQRDLIMQSAATYMLFLGEIGEAVTYALEISNRKLRNEVLLEIIRTNTRMIGKEQLKVAYRLRRSKL ALEYIDSEPYRSKALLELIKAYMILGSYENGITLIRGISVKEWARQAFKEVSFYLKDKEVLGHYIDSLEEVANELIDRFG KEFTVELALAFALTGEGIPAVKLIRRLEDSESLLVKMALELLERDHDVLPKFISALNEEEADAVGKAVMNRILERPEKGS WEIVNAIGKSTPSEEVWAKIARYYVLVGKLEGAMKVGTLIQDRKLRSIVMADIAHHLVKNGEVEKAIDAAVEVRDPKFSS VLISEILIKALERELPGRVRSWNGSKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48371; Mature: 48371
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVKEILDSVEIIQDPYIKSITYAKIGERLAKAKDNNYKTAFLRAVETTKEIDEPVKMFR CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ALLSVGYSLSKAGLKSAKRIYQEVLEDSRVLPAPQRDLIMQSAATYMLFLGEIGEAVTYA HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LEISNRKLRNEVLLEIIRTNTRMIGKEQLKVAYRLRRSKLALEYIDSEPYRSKALLELIK HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AYMILGSYENGITLIRGISVKEWARQAFKEVSFYLKDKEVLGHYIDSLEEVANELIDRFG HHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KEFTVELALAFALTGEGIPAVKLIRRLEDSESLLVKMALELLERDHDVLPKFISALNEEE HHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHH ADAVGKAVMNRILERPEKGSWEIVNAIGKSTPSEEVWAKIARYYVLVGKLEGAMKVGTLI HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDRKLRSIVMADIAHHLVKNGEVEKAIDAAVEVRDPKFSSVLISEILIKALERELPGRVR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC SWNGSKH CCCCCCC >Mature Secondary Structure MLVKEILDSVEIIQDPYIKSITYAKIGERLAKAKDNNYKTAFLRAVETTKEIDEPVKMFR CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ALLSVGYSLSKAGLKSAKRIYQEVLEDSRVLPAPQRDLIMQSAATYMLFLGEIGEAVTYA HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LEISNRKLRNEVLLEIIRTNTRMIGKEQLKVAYRLRRSKLALEYIDSEPYRSKALLELIK HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AYMILGSYENGITLIRGISVKEWARQAFKEVSFYLKDKEVLGHYIDSLEEVANELIDRFG HHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KEFTVELALAFALTGEGIPAVKLIRRLEDSESLLVKMALELLERDHDVLPKFISALNEEE HHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHH ADAVGKAVMNRILERPEKGSWEIVNAIGKSTPSEEVWAKIARYYVLVGKLEGAMKVGTLI HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDRKLRSIVMADIAHHLVKNGEVEKAIDAAVEVRDPKFSSVLISEILIKALERELPGRVR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC SWNGSKH CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA