| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is cheW [H]
Identifier: 212224342
GI number: 212224342
Start: 1089322
End: 1089762
Strand: Reverse
Name: cheW [H]
Synonym: TON_1193
Alternate gene names: 212224342
Gene position: 1089762-1089322 (Counterclockwise)
Preceding gene: 212224343
Following gene: 212224340
Centisome position: 58.98
GC content: 48.75
Gene sequence:
>441_bases ATGGCCGAGATTCAGGTCGTGGCCTTTATGGTTGGAAACGAGGAGTTTTGTCTTGATATCTCAAAGGTCAGGGAGATAAA GGAAATGATGCCAATAACTCGTGTGCCTAACTCCCCGGACTTCGTTGAGGGTGTCATAAACCTTCGCGGACAGATAACGA CCGTCGTCAATCTCAAGAAGCTCCTTGGTTACCATGACCCTGATGGAGACCTCTCAAAGAAGAAAATAATCATTGCAGAA GTCAAGGACGAGATAATAGGCATAATCGTGGATTCGGTCTCGGACGTCATAACCCTGACCGACGAGCAGATAGACCAGCC GCCGAAGACTCTTAGCAACAGGGTCGACATCCGCTACATAAAGGGCATAGCCAAAATAAACAACGGGGAGAGGCTCCTCA TAATGGTCGACCTTGACAAGCTCCTCGGCGAGGAGTTCTAA
Upstream 100 bases:
>100_bases CGGTTGGATGAAATACGAAGTGGTCTTAAGGACCTCGAACAGTCAATAGTTGAGTCAAAGGAACTTCTTGAAAAGGTTAG TACCGTCCGGAGGTGATGGG
Downstream 100 bases:
>100_bases AGTAGGTCGAGCTCTCTGAGTATTTCCTCCACGCTTCTGTCCTTTGCTCCTCCGATGTTCTCTTTTTCGGCACCGAGTCT TAGCATAAGTCTCTGCACCT
Product: purine-binding chemotaxis protein (cheW)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MAEIQVVAFMVGNEEFCLDISKVREIKEMMPITRVPNSPDFVEGVINLRGQITTVVNLKKLLGYHDPDGDLSKKKIIIAE VKDEIIGIIVDSVSDVITLTDEQIDQPPKTLSNRVDIRYIKGIAKINNGERLLIMVDLDKLLGEEF
Sequences:
>Translated_146_residues MAEIQVVAFMVGNEEFCLDISKVREIKEMMPITRVPNSPDFVEGVINLRGQITTVVNLKKLLGYHDPDGDLSKKKIIIAE VKDEIIGIIVDSVSDVITLTDEQIDQPPKTLSNRVDIRYIKGIAKINNGERLLIMVDLDKLLGEEF >Mature_145_residues AEIQVVAFMVGNEEFCLDISKVREIKEMMPITRVPNSPDFVEGVINLRGQITTVVNLKKLLGYHDPDGDLSKKKIIIAEV KDEIIGIIVDSVSDVITLTDEQIDQPPKTLSNRVDIRYIKGIAKINNGERLLIMVDLDKLLGEEF
Specific function: May be involved in the transmission of sensory signals (Potential) [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=142, Percent_Identity=36.6197183098592, Blast_Score=95, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 16392; Mature: 16261
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIQVVAFMVGNEEFCLDISKVREIKEMMPITRVPNSPDFVEGVINLRGQITTVVNLKK CCCEEEEEEEECCCHHEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHEEHHH LLGYHDPDGDLSKKKIIIAEVKDEIIGIIVDSVSDVITLTDEQIDQPPKTLSNRVDIRYI HHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCHHHEEEECHHHCCCCCHHHHCCCCHHEE KGIAKINNGERLLIMVDLDKLLGEEF HHHHEECCCCEEEEEEECHHHCCCCC >Mature Secondary Structure AEIQVVAFMVGNEEFCLDISKVREIKEMMPITRVPNSPDFVEGVINLRGQITTVVNLKK CCEEEEEEEECCCHHEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHEEHHH LLGYHDPDGDLSKKKIIIAEVKDEIIGIIVDSVSDVITLTDEQIDQPPKTLSNRVDIRYI HHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCHHHEEEECHHHCCCCCHHHHCCCCHHEE KGIAKINNGERLLIMVDLDKLLGEEF HHHHEECCCCEEEEEEECHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA