| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224337
Identifier: 212224337
GI number: 212224337
Start: 1084607
End: 1085638
Strand: Reverse
Name: 212224337
Synonym: TON_1188
Alternate gene names: NA
Gene position: 1085638-1084607 (Counterclockwise)
Preceding gene: 212224338
Following gene: 212224336
Centisome position: 58.76
GC content: 51.84
Gene sequence:
>1032_bases ATGTTTAAGAAGAAGAGGGGTGCTGTGGGAATAGGCACCCTGATTGTGTTCATAGCCATGGTTTTAGTGGCGGCAGTTGC TGCTGCGGTTCTGATTAACACCAGCGGGTTCCTCCAGCAGAAGGCTTCCAGCACCGGCAGGGAGACCACTCAGGAGGTAG CCAGCGGCATACAGGTCGAGAGGATAGTCGGTAAGACCGACGCGGCCAAGCTCAACATCCAGCAGCTCGCCATCTACGTC AGCCCGAACGCTGGCAGTGCCGGCATCGACCTCAGGAAGACCAGGATAATCATCAGCGACGGCAGCCAGCAGGCCGTTCT GAACTACAAGGTCGGTGATGGGCAGACCACGATTTCAAATGGTACTAACTCACTTACGATTGGCGATGGGCAAACAATAA CAATCACATATGATTCAATCAACAATCAGGTTAGCTTCAGTGACGGAACAACTACTGTTACTGTAGCCAATGGAGGGACT ATTCAGGACACCGAAACTGCAATGCTTGCTGTTGCGGATAATACCATCGGCAAAGGTTACATAGTGGTTCAGAGTACAAT TACCCTTGATGGAACTCAGGATGTTGGAGGAGTTACCGGGACTAATGACCTTATCATAACTGACCAGTACGGCAACCAGA TGGTAATCTACGATATAGGTTCAGGTGCCTCTGCTAATGTTAAACTCAGCGTGATTGATAGCGCCTACACTCCAGCCAGC CTCATCGCTGGTGGTGTCTTTGCTAGTGATAAGCTTGCCTGGCTCGGCCTCAGCGCTGCCACTGACTACGGTATCATCGT CATCCAGGACGCTGACAACAGTGTCCAGCCGCTCTACCCAACCATCAACAAGGGTGACATGGTTGCACTAACGTTCTATG TTGGAAACGACGCTGGAACCGCTATCTTTGGTCAGGGTATCCAGCCGAGGACCAAGATTACAGGTAAGGTTGTTCCGGAG TTCGGTGCTCCAGGCGTCATCGAGTTCACCACTCCGACCAGCTACACGGACGAGATTATCGAGCTCCAGTGA
Upstream 100 bases:
>100_bases CGGTGTTATAGAGTTCACCACCCCGAGCACCTACACCGACGCCGTTATGGAGCTCCAGTGATGCCCTTTCCTTTCAACTT ATTTGAGGAGGTGGGAGGCG
Downstream 100 bases:
>100_bases TGCCCTTTCCAATATTTTCGTGAGGAGGTGGTGTGAATGTTCGGTAAAAAGAAGAGGGGTGCTGTCGGAATTGGTACCCT GATAGTGTTCATCGCTATGG
Product: flagellin B precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MFKKKRGAVGIGTLIVFIAMVLVAAVAAAVLINTSGFLQQKASSTGRETTQEVASGIQVERIVGKTDAAKLNIQQLAIYV SPNAGSAGIDLRKTRIIISDGSQQAVLNYKVGDGQTTISNGTNSLTIGDGQTITITYDSINNQVSFSDGTTTVTVANGGT IQDTETAMLAVADNTIGKGYIVVQSTITLDGTQDVGGVTGTNDLIITDQYGNQMVIYDIGSGASANVKLSVIDSAYTPAS LIAGGVFASDKLAWLGLSAATDYGIIVIQDADNSVQPLYPTINKGDMVALTFYVGNDAGTAIFGQGIQPRTKITGKVVPE FGAPGVIEFTTPTSYTDEIIELQ
Sequences:
>Translated_343_residues MFKKKRGAVGIGTLIVFIAMVLVAAVAAAVLINTSGFLQQKASSTGRETTQEVASGIQVERIVGKTDAAKLNIQQLAIYV SPNAGSAGIDLRKTRIIISDGSQQAVLNYKVGDGQTTISNGTNSLTIGDGQTITITYDSINNQVSFSDGTTTVTVANGGT IQDTETAMLAVADNTIGKGYIVVQSTITLDGTQDVGGVTGTNDLIITDQYGNQMVIYDIGSGASANVKLSVIDSAYTPAS LIAGGVFASDKLAWLGLSAATDYGIIVIQDADNSVQPLYPTINKGDMVALTFYVGNDAGTAIFGQGIQPRTKITGKVVPE FGAPGVIEFTTPTSYTDEIIELQ >Mature_343_residues MFKKKRGAVGIGTLIVFIAMVLVAAVAAAVLINTSGFLQQKASSTGRETTQEVASGIQVERIVGKTDAAKLNIQQLAIYV SPNAGSAGIDLRKTRIIISDGSQQAVLNYKVGDGQTTISNGTNSLTIGDGQTITITYDSINNQVSFSDGTTTVTVANGGT IQDTETAMLAVADNTIGKGYIVVQSTITLDGTQDVGGVTGTNDLIITDQYGNQMVIYDIGSGASANVKLSVIDSAYTPAS LIAGGVFASDKLAWLGLSAATDYGIIVIQDADNSVQPLYPTINKGDMVALTFYVGNDAGTAIFGQGIQPRTKITGKVVPE FGAPGVIEFTTPTSYTDEIIELQ
Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella [H]
COG id: COG1681
COG function: function code N; Archaeal flagellins
Gene ontology:
Cell location: Archaeal flagellum [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal flagellin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013373 - InterPro: IPR002774 [H]
Pfam domain/function: PF01917 Arch_flagellin [H]
EC number: NA
Molecular weight: Translated: 35610; Mature: 35610
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKKRGAVGIGTLIVFIAMVLVAAVAAAVLINTSGFLQQKASSTGRETTQEVASGIQVE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCCHHHHHHHHCCCEEE RIVGKTDAAKLNIQQLAIYVSPNAGSAGIDLRKTRIIISDGSQQAVLNYKVGDGQTTISN EEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCEEECC GTNSLTIGDGQTITITYDSINNQVSFSDGTTTVTVANGGTIQDTETAMLAVADNTIGKGY CCCEEEECCCCEEEEEEECCCCEEEECCCCEEEEEECCCEEECCCEEEEEEECCCCCCCE IVVQSTITLDGTQDVGGVTGTNDLIITDQYGNQMVIYDIGSGASANVKLSVIDSAYTPAS EEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEEEECCCCCHH LIAGGVFASDKLAWLGLSAATDYGIIVIQDADNSVQPLYPTINKGDMVALTFYVGNDAGT HHCCCEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCC AIFGQGIQPRTKITGKVVPEFGAPGVIEFTTPTSYTDEIIELQ EEEECCCCCCCEECEEEEECCCCCCEEEECCCCCCCCEEEEEC >Mature Secondary Structure MFKKKRGAVGIGTLIVFIAMVLVAAVAAAVLINTSGFLQQKASSTGRETTQEVASGIQVE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCCHHHHHHHHCCCEEE RIVGKTDAAKLNIQQLAIYVSPNAGSAGIDLRKTRIIISDGSQQAVLNYKVGDGQTTISN EEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCEEECC GTNSLTIGDGQTITITYDSINNQVSFSDGTTTVTVANGGTIQDTETAMLAVADNTIGKGY CCCEEEECCCCEEEEEEECCCCEEEECCCCEEEEEECCCEEECCCEEEEEEECCCCCCCE IVVQSTITLDGTQDVGGVTGTNDLIITDQYGNQMVIYDIGSGASANVKLSVIDSAYTPAS EEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEEEECCCCCHH LIAGGVFASDKLAWLGLSAATDYGIIVIQDADNSVQPLYPTINKGDMVALTFYVGNDAGT HHCCCEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCC AIFGQGIQPRTKITGKVVPEFGAPGVIEFTTPTSYTDEIIELQ EEEECCCCCCCEECEEEEECCCCCCEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]