| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is serB [C]
Identifier: 212224324
GI number: 212224324
Start: 1072044
End: 1072667
Strand: Reverse
Name: serB [C]
Synonym: TON_1175
Alternate gene names: 212224324
Gene position: 1072667-1072044 (Counterclockwise)
Preceding gene: 212224325
Following gene: 212224321
Centisome position: 58.06
GC content: 50.8
Gene sequence:
>624_bases ATGGTGAGACTGATTGCCTTTGACCTTGAGGGAACGCTGGTCAAATCCGTCTCAAGCTGGGTAGAGCTTCACAAGAAGTT TGGAACCTGGGATAAGGGTAAGGAGTATGCTGAGCGCTTCTTCGCTGGGGAGTTTGATTACGCAACATGGGCAGAGCTCG ACGCTTTGCTTTGGAAGGGCCATACAAAAGAGGAGATAATGGAGTGGGCTAACTCCGTGGAGTACATGGATGGTGCATGG GAGCTCATTGAATTTCTGAGGAAGAATAATTTCAAAATAGCAATACTAAGCAGCGGGCTGATGTGCCTTGCAAGGAGGAT AGCCAGCGAGCTTGGCGTTGACTACGTCTTTGCCAACGAGCTGATTTTTGACGAGAACGGGGTTATTACTGGGGAGGTAA ATCCTGCTGTGGATTTCCAGAGCAAGGGAAAAATTCTGGAGAACCTCAAGAAGGAGCTCGATCCTGAGCTGACGGTAGCA GTCGGCGACGGCTACAATGACCTCAGCATGTTCAGCGTTGCGGATGTCAGCATCGCCATAAACCCGCACGAGGGAGTCGA GGGAGACCACAACGTCGAGAGTCTGCATGAGGTCATGGAGATCATCAAGGAACTCCTTGGCTGA
Upstream 100 bases:
>100_bases TCAAGCGGCACGGTGGAGTTGCCTTTGTGCCCCTCATCGGGGAGCACGGCTGGAAGGAGTAGGCTTTTAAGTCGTGATGA GTTTTTCCTCTGGTGGTATC
Downstream 100 bases:
>100_bases TTTTCTATGCTTTTCTCGGGGTCGGTGAAGGGCGTGGTCATCACGACGCAGCGCGGCTTCAGCAAAGCAAAAGCTCGTCA TCCCCCTGTCGGCCCGACCG
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MVRLIAFDLEGTLVKSVSSWVELHKKFGTWDKGKEYAERFFAGEFDYATWAELDALLWKGHTKEEIMEWANSVEYMDGAW ELIEFLRKNNFKIAILSSGLMCLARRIASELGVDYVFANELIFDENGVITGEVNPAVDFQSKGKILENLKKELDPELTVA VGDGYNDLSMFSVADVSIAINPHEGVEGDHNVESLHEVMEIIKELLG
Sequences:
>Translated_207_residues MVRLIAFDLEGTLVKSVSSWVELHKKFGTWDKGKEYAERFFAGEFDYATWAELDALLWKGHTKEEIMEWANSVEYMDGAW ELIEFLRKNNFKIAILSSGLMCLARRIASELGVDYVFANELIFDENGVITGEVNPAVDFQSKGKILENLKKELDPELTVA VGDGYNDLSMFSVADVSIAINPHEGVEGDHNVESLHEVMEIIKELLG >Mature_207_residues MVRLIAFDLEGTLVKSVSSWVELHKKFGTWDKGKEYAERFFAGEFDYATWAELDALLWKGHTKEEIMEWANSVEYMDGAW ELIEFLRKNNFKIAILSSGLMCLARRIASELGVDYVFANELIFDENGVITGEVNPAVDFQSKGKILENLKKELDPELTVA VGDGYNDLSMFSVADVSIAINPHEGVEGDHNVESLHEVMEIIKELLG
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1790849, Length=197, Percent_Identity=31.4720812182741, Blast_Score=70, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321647, Length=209, Percent_Identity=31.1004784688995, Blast_Score=78, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 23354; Mature: 23354
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLIAFDLEGTLVKSVSSWVELHKKFGTWDKGKEYAERFFAGEFDYATWAELDALLWKG CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCC HTKEEIMEWANSVEYMDGAWELIEFLRKNNFKIAILSSGLMCLARRIASELGVDYVFANE CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEECC LIFDENGVITGEVNPAVDFQSKGKILENLKKELDPELTVAVGDGYNDLSMFSVADVSIAI EEECCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEEEEEEE NPHEGVEGDHNVESLHEVMEIIKELLG CCCCCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure MVRLIAFDLEGTLVKSVSSWVELHKKFGTWDKGKEYAERFFAGEFDYATWAELDALLWKG CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCC HTKEEIMEWANSVEYMDGAWELIEFLRKNNFKIAILSSGLMCLARRIASELGVDYVFANE CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEECC LIFDENGVITGEVNPAVDFQSKGKILENLKKELDPELTVAVGDGYNDLSMFSVADVSIAI EEECCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEEEEEEE NPHEGVEGDHNVESLHEVMEIIKELLG CCCCCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]