Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224296

Identifier: 212224296

GI number: 212224296

Start: 1051854

End: 1052552

Strand: Reverse

Name: 212224296

Synonym: TON_1147

Alternate gene names: NA

Gene position: 1052552-1051854 (Counterclockwise)

Preceding gene: 212224302

Following gene: 212224295

Centisome position: 56.97

GC content: 51.65

Gene sequence:

>699_bases
ATGGACAACAGCAACAACCGTTTGAAAGCTGCAATGCTCCTCATCATCGGAGCCAACATACTCAAGAAGTCGCCGGTTTA
TATACTCCTGTACTTTCTCGCCTTTGCTCTGCTCTCCAGAAGAGAGTGGAAGAGCCTGCCCGCGCTGCTGGGATGGGCGA
TGCTCGTGGGTTTTCTGGCGGAATTCGTAGGCACGCGCATGTGCCTGCCTTTTAGCTGTTACGAGTACGTCAACCTTCAG
CCCCAGATTCTGGAGATAGCGGTCTTTGTGCCTCTTGCGTGGGCAATCTTTGGAGCCATCTCATACCTCACGGCCAGCTT
TCTGTTCGCGAGGAAGTACCACAGGCTTCTCTTCGCTTCGCTCCTGATGGTTGTCCTTGACCTCTCGATAGACCCCATCA
TGACCTCATGGAGTGGGTGGGTCTGGAAAACCTCAACAACAATAAACTGGTTTGGGATTCCCTGGACAAACTACGCCGGC
TGGTTCATAGTGTCCCTGGTGATATTCTATCTCTATGAGAGATTTTCGGATGCTTCCATATGCCACAGCCTCAGGAAGTT
TGGGCCACCCATCTATCTGCTGGAGATGCTGACTTTTGCAGTCTATGCTCCGGAGAGTGTTAAGGTGCCGACGATGGTGG
CGTTCCTAATTTCCCTTGTTCTGGTAATTCCACTTAGCCTCAAGAGGCTGGGAGAATGA

Upstream 100 bases:

>100_bases
ATATGTAATTCTAATATTACATATGCTATGGAACTTTATAAGCCTTTCGGCTCACAGAACTGGGCAACAGGTTTATATCC
TTCTGTGAAGAAATCCCTAC

Downstream 100 bases:

>100_bases
GAGTCGCTTTAGTCCCAATGCGCGTGAAGATCGGAGACTTTGAGGCCAACTGGAAGGAGTTTCAACGGCGCTTTGATGAG
GCGATGAAGCACGGGACGAC

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDNSNNRLKAAMLLIIGANILKKSPVYILLYFLAFALLSRREWKSLPALLGWAMLVGFLAEFVGTRMCLPFSCYEYVNLQ
PQILEIAVFVPLAWAIFGAISYLTASFLFARKYHRLLFASLLMVVLDLSIDPIMTSWSGWVWKTSTTINWFGIPWTNYAG
WFIVSLVIFYLYERFSDASICHSLRKFGPPIYLLEMLTFAVYAPESVKVPTMVAFLISLVLVIPLSLKRLGE

Sequences:

>Translated_232_residues
MDNSNNRLKAAMLLIIGANILKKSPVYILLYFLAFALLSRREWKSLPALLGWAMLVGFLAEFVGTRMCLPFSCYEYVNLQ
PQILEIAVFVPLAWAIFGAISYLTASFLFARKYHRLLFASLLMVVLDLSIDPIMTSWSGWVWKTSTTINWFGIPWTNYAG
WFIVSLVIFYLYERFSDASICHSLRKFGPPIYLLEMLTFAVYAPESVKVPTMVAFLISLVLVIPLSLKRLGE
>Mature_232_residues
MDNSNNRLKAAMLLIIGANILKKSPVYILLYFLAFALLSRREWKSLPALLGWAMLVGFLAEFVGTRMCLPFSCYEYVNLQ
PQILEIAVFVPLAWAIFGAISYLTASFLFARKYHRLLFASLLMVVLDLSIDPIMTSWSGWVWKTSTTINWFGIPWTNYAG
WFIVSLVIFYLYERFSDASICHSLRKFGPPIYLLEMLTFAVYAPESVKVPTMVAFLISLVLVIPLSLKRLGE

Specific function: Unknown

COG id: COG2324

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26476; Mature: 26476

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSNNRLKAAMLLIIGANILKKSPVYILLYFLAFALLSRREWKSLPALLGWAMLVGFLA
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFVGTRMCLPFSCYEYVNLQPQILEIAVFVPLAWAIFGAISYLTASFLFARKYHRLLFAS
HHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMVVLDLSIDPIMTSWSGWVWKTSTTINWFGIPWTNYAGWFIVSLVIFYLYERFSDASI
HHHHHHHCCCCHHHHCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHH
CHSLRKFGPPIYLLEMLTFAVYAPESVKVPTMVAFLISLVLVIPLSLKRLGE
HHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNSNNRLKAAMLLIIGANILKKSPVYILLYFLAFALLSRREWKSLPALLGWAMLVGFLA
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFVGTRMCLPFSCYEYVNLQPQILEIAVFVPLAWAIFGAISYLTASFLFARKYHRLLFAS
HHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMVVLDLSIDPIMTSWSGWVWKTSTTINWFGIPWTNYAGWFIVSLVIFYLYERFSDASI
HHHHHHHCCCCHHHHCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHH
CHSLRKFGPPIYLLEMLTFAVYAPESVKVPTMVAFLISLVLVIPLSLKRLGE
HHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA