| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is yfiQ [C]
Identifier: 212224246
GI number: 212224246
Start: 1017809
End: 1019194
Strand: Reverse
Name: yfiQ [C]
Synonym: TON_1097
Alternate gene names: 212224246
Gene position: 1019194-1017809 (Counterclockwise)
Preceding gene: 212224249
Following gene: 212224245
Centisome position: 55.16
GC content: 56.71
Gene sequence:
>1386_bases ATGAGTTTAGAGGCACTTTTTAGGCCAAAAAGCATCGCCGTCATCGGAGCTTCAGAGAAGCCAGGTAAGATAGGCTACGC AGTTATGAAAAACCTCGTCGAATACGGCTATGAGGGCAAGATCTACCCTGTTAATGTCAAGGGTGTCGAGATTGAGATCA ACGGCAGGAAGTTCAAGTCATACAAGAGCATCCTTGATGTTCCCGATGACGTCGATATGGCTGTTGTAGTTGTCCCGGCC AGGTTCGTCCCGCAGGTCGTCGAGGAGTGTGGCAAGAAGGGCGTTAAAGTTCTCCCCATCATAAGCTCTGGCTTCGGTGA GCTTGGCGAGGAGGGCAAGAAGATTGAGAGACAGCTCGTGGAGACCGCCAACAAGTACGGCATGAGAATCCTTGGCCCGA ACATCTTCGGCGTTGTCTACACTCCAGCCAAGATGAACGCCACTTTCGGCCCAACCGATGTCATGCCGGGTAACCTTGCC CTCATCAGCCAGAGCGGTGCCCTTGGAATTGCCCTCATGGGCTGGACCATCCTCGAGAAGGTCGGCCTTTCAGCCGTCGT CAGTGTTGGAAACAAGAGCGACATCGACGACGCCGACCTGCTTGAATTCTTCAAGACCGACGACAACACCAAGGCCATCC TTATCTACATGGAGGGTGTCAAGGACGGAAGGCGCTTTATGGAGGTTGCCAAGGAAGTCAGCATGGAGAAGCCGATTATC ATTATCAAGGCCGGAAGGAGTGAGCGTGGAGCCAAGGCCGCAGCTTCCCACACTGGTTCGCTCGCCGGTGCTGACAAGAT ATACGAGGCCGCCTTCAAGCAGAGCGGCGTTCTGAGGGCCTTAACCATCGGCGAGGCCTTTGACTGGGCGAGAACGCTGA GCAACCTGCCAGAGCCAGAGGGCGAGAACCTCGTCATACTCACCAACGGCGGTGGAATTGGAGTTATGGCCACCGACGCC GCTGAGGAAGAGGGTCTGCACCTCTACGATAACCTGGAAGACCTGAAAGTCTTCGCCAACCACATGCCGCCCTTCGGAAG CTACAAGAACCCGGTTGACCTCACAGGTATGGCCGGCGCGGAGGCCTACGAGGGTGCCATAAGGGACGCCCTGGCGAACC CGAACATGCACAGCATCGCTGTGCTCTACTGCCAGACGGCCGTGCTTGACCCGAGGGATCTCGCCAAGATAGTCATCCGC GAGTACAACGAGAGCGGCAGGAAGAAGCCACTCGTCGTTGCCATCGTCGGCGGCATAGAGGCCAAGGAAGCCATCGACAT GCTCAACGAGGAGGGCATTCCAGCCTATCCGGAGCCGGAGAGGGCGATAAAGGCTCTTGCTGCCCTCTACCGCTGGAGCC GCTGGAAGAAGAGGCAAGGAGAGTGA
Upstream 100 bases:
>100_bases CTTTGACGGATGACGATTCAGTTATCGTCAAAACGAGAAGAGAAAAGTTATAACCCATTTTACAGACGTGAAATTGTAAA TATCATCAGGGGTGATGAAG
Downstream 100 bases:
>100_bases ACTCCTTCAGCATCCTTTTCTTAATTCTTCCCTCGCTGCAATTGCGCTCCTGTTTTGAGACATGCTTTAATACCTCCACG CCCAACTTTCTTGAGGGATG
Product: acetyl-CoA synthetase I (NDP forming), alpha subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MSLEALFRPKSIAVIGASEKPGKIGYAVMKNLVEYGYEGKIYPVNVKGVEIEINGRKFKSYKSILDVPDDVDMAVVVVPA RFVPQVVEECGKKGVKVLPIISSGFGELGEEGKKIERQLVETANKYGMRILGPNIFGVVYTPAKMNATFGPTDVMPGNLA LISQSGALGIALMGWTILEKVGLSAVVSVGNKSDIDDADLLEFFKTDDNTKAILIYMEGVKDGRRFMEVAKEVSMEKPII IIKAGRSERGAKAAASHTGSLAGADKIYEAAFKQSGVLRALTIGEAFDWARTLSNLPEPEGENLVILTNGGGIGVMATDA AEEEGLHLYDNLEDLKVFANHMPPFGSYKNPVDLTGMAGAEAYEGAIRDALANPNMHSIAVLYCQTAVLDPRDLAKIVIR EYNESGRKKPLVVAIVGGIEAKEAIDMLNEEGIPAYPEPERAIKALAALYRWSRWKKRQGE
Sequences:
>Translated_461_residues MSLEALFRPKSIAVIGASEKPGKIGYAVMKNLVEYGYEGKIYPVNVKGVEIEINGRKFKSYKSILDVPDDVDMAVVVVPA RFVPQVVEECGKKGVKVLPIISSGFGELGEEGKKIERQLVETANKYGMRILGPNIFGVVYTPAKMNATFGPTDVMPGNLA LISQSGALGIALMGWTILEKVGLSAVVSVGNKSDIDDADLLEFFKTDDNTKAILIYMEGVKDGRRFMEVAKEVSMEKPII IIKAGRSERGAKAAASHTGSLAGADKIYEAAFKQSGVLRALTIGEAFDWARTLSNLPEPEGENLVILTNGGGIGVMATDA AEEEGLHLYDNLEDLKVFANHMPPFGSYKNPVDLTGMAGAEAYEGAIRDALANPNMHSIAVLYCQTAVLDPRDLAKIVIR EYNESGRKKPLVVAIVGGIEAKEAIDMLNEEGIPAYPEPERAIKALAALYRWSRWKKRQGE >Mature_460_residues SLEALFRPKSIAVIGASEKPGKIGYAVMKNLVEYGYEGKIYPVNVKGVEIEINGRKFKSYKSILDVPDDVDMAVVVVPAR FVPQVVEECGKKGVKVLPIISSGFGELGEEGKKIERQLVETANKYGMRILGPNIFGVVYTPAKMNATFGPTDVMPGNLAL ISQSGALGIALMGWTILEKVGLSAVVSVGNKSDIDDADLLEFFKTDDNTKAILIYMEGVKDGRRFMEVAKEVSMEKPIII IKAGRSERGAKAAASHTGSLAGADKIYEAAFKQSGVLRALTIGEAFDWARTLSNLPEPEGENLVILTNGGGIGVMATDAA EEEGLHLYDNLEDLKVFANHMPPFGSYKNPVDLTGMAGAEAYEGAIRDALANPNMHSIAVLYCQTAVLDPRDLAKIVIRE YNESGRKKPLVVAIVGGIEAKEAIDMLNEEGIPAYPEPERAIKALAALYRWSRWKKRQGE
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=467, Percent_Identity=32.1199143468951, Blast_Score=225, Evalue=5e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 49911; Mature: 49780
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEALFRPKSIAVIGASEKPGKIGYAVMKNLVEYGYEGKIYPVNVKGVEIEINGRKFKS CCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCHHHH YKSILDVPDDVDMAVVVVPARFVPQVVEECGKKGVKVLPIISSGFGELGEEGKKIERQLV HHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEEHHCCHHHHHHHHHHHHHHHH ETANKYGMRILGPNIFGVVYTPAKMNATFGPTDVMPGNLALISQSGALGIALMGWTILEK HHHHHCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHH VGLSAVVSVGNKSDIDDADLLEFFKTDDNTKAILIYMEGVKDGRRFMEVAKEVSMEKPII HCHHHEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEE IIKAGRSERGAKAAASHTGSLAGADKIYEAAFKQSGVLRALTIGEAFDWARTLSNLPEPE EEECCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCC GENLVILTNGGGIGVMATDAAEEEGLHLYDNLEDLKVFANHMPPFGSYKNPVDLTGMAGA CCEEEEEECCCCEEEEEECCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC EAYEGAIRDALANPNMHSIAVLYCQTAVLDPRDLAKIVIREYNESGRKKPLVVAIVGGIE HHHHHHHHHHHCCCCHHHEEEEEEHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCC AKEAIDMLNEEGIPAYPEPERAIKALAALYRWSRWKKRQGE HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLEALFRPKSIAVIGASEKPGKIGYAVMKNLVEYGYEGKIYPVNVKGVEIEINGRKFKS CCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCHHHH YKSILDVPDDVDMAVVVVPARFVPQVVEECGKKGVKVLPIISSGFGELGEEGKKIERQLV HHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEEHHCCHHHHHHHHHHHHHHHH ETANKYGMRILGPNIFGVVYTPAKMNATFGPTDVMPGNLALISQSGALGIALMGWTILEK HHHHHCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHH VGLSAVVSVGNKSDIDDADLLEFFKTDDNTKAILIYMEGVKDGRRFMEVAKEVSMEKPII HCHHHEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEE IIKAGRSERGAKAAASHTGSLAGADKIYEAAFKQSGVLRALTIGEAFDWARTLSNLPEPE EEECCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCC GENLVILTNGGGIGVMATDAAEEEGLHLYDNLEDLKVFANHMPPFGSYKNPVDLTGMAGA CCEEEEEECCCCEEEEEECCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC EAYEGAIRDALANPNMHSIAVLYCQTAVLDPRDLAKIVIREYNESGRKKPLVVAIVGGIE HHHHHHHHHHHCCCCHHHEEEEEEHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCC AKEAIDMLNEEGIPAYPEPERAIKALAALYRWSRWKKRQGE HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]