Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224212

Identifier: 212224212

GI number: 212224212

Start: 980336

End: 980725

Strand: Reverse

Name: 212224212

Synonym: TON_1063

Alternate gene names: NA

Gene position: 980725-980336 (Counterclockwise)

Preceding gene: 212224215

Following gene: 212224205

Centisome position: 53.08

GC content: 53.33

Gene sequence:

>390_bases
ATGGATGAGAAAAAGAAGAAGCGCCCTATAGATGAGTTCGCCTGGCAGGAGTACGATAAAGGAGAGTTTGAAGAACGCTT
TCCAGCTTTGGCGAGGGAGCTTGAGGGGGAGGGCGTTCCGATAGACGCTTACAGAACGGATGAGGCCAAAGCCATAGCTG
AGGAAGATGAGCTCAGGGACTTCTCCGGCTACAACCCAACTGTCATAGACTTCCTGAGGAGATGTGAGACAGACGACGAG
GCGCTCGAAATAATCAATTGGATGGAGAAGCGCGGAGAGATAACCCACGAGATGGCTAAGGAGCTCAGGATAACCCTTGT
CCAGAAGGGTGTGAGGGCATTCGGTCCGAAGAAGGAGTGGGGTTGGTACGAGCGACACGGGGGGAGGTAA

Upstream 100 bases:

>100_bases
CTCCCCGAGTTTGATGACTAGAAAATACGAACCCTTCATGGACCTGGATTCCACTCAGGGTTTATAAACCCTTGACTCAT
AGTTCCCTCAGGTGTGATGC

Downstream 100 bases:

>100_bases
GGCTTATTCCTGCTCCTGCTGTGTTCTCTCAAGGCCTTATTATAACTTTTAAGGGATTGTTGCGTTCCATGATGGAACTT
CTCAAAAGATGTCCTGAACA

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDEKKKKRPIDEFAWQEYDKGEFEERFPALARELEGEGVPIDAYRTDEAKAIAEEDELRDFSGYNPTVIDFLRRCETDDE
ALEIINWMEKRGEITHEMAKELRITLVQKGVRAFGPKKEWGWYERHGGR

Sequences:

>Translated_129_residues
MDEKKKKRPIDEFAWQEYDKGEFEERFPALARELEGEGVPIDAYRTDEAKAIAEEDELRDFSGYNPTVIDFLRRCETDDE
ALEIINWMEKRGEITHEMAKELRITLVQKGVRAFGPKKEWGWYERHGGR
>Mature_129_residues
MDEKKKKRPIDEFAWQEYDKGEFEERFPALARELEGEGVPIDAYRTDEAKAIAEEDELRDFSGYNPTVIDFLRRCETDDE
ALEIINWMEKRGEITHEMAKELRITLVQKGVRAFGPKKEWGWYERHGGR

Specific function: Unknown

COG id: COG4003

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15283; Mature: 15283

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKKKKRPIDEFAWQEYDKGEFEERFPALARELEGEGVPIDAYRTDEAKAIAEEDELRD
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
FSGYNPTVIDFLRRCETDDEALEIINWMEKRGEITHEMAKELRITLVQKGVRAFGPKKEW
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GWYERHGGR
CCHHCCCCC
>Mature Secondary Structure
MDEKKKKRPIDEFAWQEYDKGEFEERFPALARELEGEGVPIDAYRTDEAKAIAEEDELRD
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
FSGYNPTVIDFLRRCETDDEALEIINWMEKRGEITHEMAKELRITLVQKGVRAFGPKKEW
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GWYERHGGR
CCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA