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The map label for this gene is yadH [H]

Identifier: 212224141

GI number: 212224141

Start: 918541

End: 919305

Strand: Reverse

Name: yadH [H]

Synonym: TON_0992

Alternate gene names: 212224141

Gene position: 919305-918541 (Counterclockwise)

Preceding gene: 212224142

Following gene: 212224140

Centisome position: 49.76

GC content: 55.42

Gene sequence:

>765_bases
ATGCAGGTCTTTCTCACAATGATATACCGCGAACTGAAGCGCTTTTCCCGCTCCCGTGCGAGAGTTATAGGGAGCATAAT
CAACCCGCTCATATGGCTCATATTCTTCGGAAAGGGCTGGAGCGGTGTCTTCAACAACCCGATGGCAGCGCAGCTCTTCG
GCGGCGTCGACTACATGACATACCTAGTGCCAGGAATAGTGGCCATGACGGTCTTCAACATGAGCTTTATGCAGGGCATA
ACCCTCATCTGGGACAAGCAGTTCGGCTTTCTCAAGGAGATACTCGTGGCTCCAGCGAGCAGGACTGAGGCAATACTCGG
CAGAATCACCGGCGGTGCTTTGATGGCCATGATACAGGGTGTCATAATCCTGGCCCTCAGCTTCACGATGGCGGACCTCA
ACGTGAGCGGGGTCCTTCCAGCCCTTGGACTCAGCTTCCTCGTCGGCATAGCGATAGCGTCAATGGGAGTTGCAATAGCG
CTCAAGATGACCAGCATGGAAGGCTTCCAGATGATAGTGACCATGATAATGCTCCCAATGACCTTCCTAAGCGGAGCGTT
CTATCCGATAAGCACGATGCCGGAGTGGATGCAGTGGCTGGCGAAGGTAAACCCCCTGACCTACGCGGTGGACGGCTCGA
GGTATTATCTGGCTGGAGTCGAGCCGACCTTTGGAATCGTCACGGACTGGGTAGTCCTGGCTGGCCTCGCCGCGCTCTTC
GCAGGAATAGCGGCGCTCGAGTTCAGGAAGGCGACAATAGACTGA

Upstream 100 bases:

>100_bases
GACGTCTTTCTGCACCTCACCGGAAGGGAAATCAGGGACGAAGGTGGCGAGCAGAACGTGGCGAAAATGATAATGAAGGC
TCGTATGAGGAGGTGATTGC

Downstream 100 bases:

>100_bases
GGTGGCGGATGTATGAAGAATCAGCAGTTTACCATGCTCTGCGTGGCCCTTGCGGGCCTGATTTTTATTCCCACAGTCTT
TTTCAACCAGCCTCTCTTTG

Product: ABC type transporter permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MQVFLTMIYRELKRFSRSRARVIGSIINPLIWLIFFGKGWSGVFNNPMAAQLFGGVDYMTYLVPGIVAMTVFNMSFMQGI
TLIWDKQFGFLKEILVAPASRTEAILGRITGGALMAMIQGVIILALSFTMADLNVSGVLPALGLSFLVGIAIASMGVAIA
LKMTSMEGFQMIVTMIMLPMTFLSGAFYPISTMPEWMQWLAKVNPLTYAVDGSRYYLAGVEPTFGIVTDWVVLAGLAALF
AGIAALEFRKATID

Sequences:

>Translated_254_residues
MQVFLTMIYRELKRFSRSRARVIGSIINPLIWLIFFGKGWSGVFNNPMAAQLFGGVDYMTYLVPGIVAMTVFNMSFMQGI
TLIWDKQFGFLKEILVAPASRTEAILGRITGGALMAMIQGVIILALSFTMADLNVSGVLPALGLSFLVGIAIASMGVAIA
LKMTSMEGFQMIVTMIMLPMTFLSGAFYPISTMPEWMQWLAKVNPLTYAVDGSRYYLAGVEPTFGIVTDWVVLAGLAALF
AGIAALEFRKATID
>Mature_254_residues
MQVFLTMIYRELKRFSRSRARVIGSIINPLIWLIFFGKGWSGVFNNPMAAQLFGGVDYMTYLVPGIVAMTVFNMSFMQGI
TLIWDKQFGFLKEILVAPASRTEAILGRITGGALMAMIQGVIILALSFTMADLNVSGVLPALGLSFLVGIAIASMGVAIA
LKMTSMEGFQMIVTMIMLPMTFLSGAFYPISTMPEWMQWLAKVNPLTYAVDGSRYYLAGVEPTFGIVTDWVVLAGLAALF
AGIAALEFRKATID

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=232, Percent_Identity=25, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787010, Length=162, Percent_Identity=23.4567901234568, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27761; Mature: 27761

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVFLTMIYRELKRFSRSRARVIGSIINPLIWLIFFGKGWSGVFNNPMAAQLFGGVDYMT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHH
YLVPGIVAMTVFNMSFMQGITLIWDKQFGFLKEILVAPASRTEAILGRITGGALMAMIQG
HHHHHHHHHHHHHHHHHCCHHHEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VIILALSFTMADLNVSGVLPALGLSFLVGIAIASMGVAIALKMTSMEGFQMIVTMIMLPM
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHH
TFLSGAFYPISTMPEWMQWLAKVNPLTYAVDGSRYYLAGVEPTFGIVTDWVVLAGLAALF
HHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHH
AGIAALEFRKATID
HHHHHHHHHHHCCC
>Mature Secondary Structure
MQVFLTMIYRELKRFSRSRARVIGSIINPLIWLIFFGKGWSGVFNNPMAAQLFGGVDYMT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHH
YLVPGIVAMTVFNMSFMQGITLIWDKQFGFLKEILVAPASRTEAILGRITGGALMAMIQG
HHHHHHHHHHHHHHHHHCCHHHEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VIILALSFTMADLNVSGVLPALGLSFLVGIAIASMGVAIALKMTSMEGFQMIVTMIMLPM
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHH
TFLSGAFYPISTMPEWMQWLAKVNPLTYAVDGSRYYLAGVEPTFGIVTDWVVLAGLAALF
HHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHH
AGIAALEFRKATID
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]