| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224062
Identifier: 212224062
GI number: 212224062
Start: 843254
End: 844696
Strand: Reverse
Name: 212224062
Synonym: TON_0913
Alternate gene names: NA
Gene position: 844696-843254 (Counterclockwise)
Preceding gene: 212224063
Following gene: 212224060
Centisome position: 45.72
GC content: 44.42
Gene sequence:
>1443_bases GTGGGGAGCTGTGATGTGGTGAGTCCTGCGAACTGGGCGGATGTTCAGATTACTTGGAACATCACTGATTACAGTTGGGG TATACGGGACCTGTATGAATATACCCTGAATGAGGTGATCATAAATTTCTCAGATTCTCTGCCAGCGGGAACTACAATGT ACATCAATGTCACGATTTACGGATACAATTCCAATACTGGGCAGTACCAGAGTGACAGTTTTACGAACTTCACGGTGTTC ACTAGTGGATGGAGTGCTGCACTGCCATATATTATAACAAACAAGGATACACAGTACTCGTATTATGTTAGTTCCTTTTT TGGAATTTCGCCTCCGGAAATCGTCGACATAAAAATAGTTCTTGTGGGGGGTAGCAATAACTGCACGATACTTCCTATCT ATATAGAGGTTCAGAAGATTGGTGTAGCTACACTGTCGTTTGCTCCCTCTGGAAGTGGAAACGTTCCCATCGACGTTACG GAACGGAGTGGACAGGATCTGAGGGACTATGTTATCAACTTTACTTTGGGTGGAGACTGGAGTTCTTTATACCCTTACGT TACCGATGAAAATGGCAACCGTCTGTACTACTGGTACTTTTACGACGCTGCCTCTCAGAAGACGTGGTTCTGGGTCAAAA TGAATCTAAGTGCTAATCAGGTTAACACGATATACCTATTTTACGGAAACCAGTCTGCTTACGATGCGACATACTTTAAT CCAGACAAAGTGTTTTGGTTTTTTGATGATTTCAACGGCGTCACATTAAACCTTTCAAAATGGAACATCCCTACCCTTCA GAATCCCTCCAACTACACTGTTTCTAATGGCCTGCTTGAGCTTAAAGGTGGTCAGTGGCTCTGGACTAAGCAGAATTTCA GTGGCTCATTCATCATCGATTTGTACGCGAATTCCCTGGACTCCACGGCATTTCCAATTTTTTATGTGGACAGCACGAAC TATGGCTGGGCCATACTACTAAATACTTCCCTCGCAACATGGGGAGCTACAACTTATCAACTCAACAATGTAACAATAAG AGGATTTAACTTGGCAGATGGCTCGTGGGGAGCATTTTATTATCCAGATGGTGGTAGTAGGAGTCCGATATTTGGAAAAG ACATCTTAATAACCACGCTCATTAATGTCACTAGCACTCAGGCCGAGTTCTACCTCTATGAAAACGGCTCACTCATAGCA ACCTTCACTCAAGGTTACTCCCCCGAACAGAGTGAACCCTTGGGCCTTGGTCAGTGGTATGAGTACAACTACACTATAAC TGGTCCACGGAGGAACCCCCAGCTTACCCTCTCCTCGATAATAAACACGACCTCAATCTATGACTGGATACTTGTACGGC CCTACATTTACCCTGAACCCGAAGTGCAGGTAGTAGGCCAGACCTCTGGTAGCTACACCTTTAGGATTTACTTTAAACCC TGA
Upstream 100 bases:
>100_bases AAAGTTGAGATTGACATCAGCCATGCTTGCACTCGTGCTTCTTCTGGCGACGCTTGGGTTAGCTGTCCCCAGCATTAACG TTTCCGTACAGGAGATTGGA
Downstream 100 bases:
>100_bases GCCTGATACCACTCCACAGTCTTCTTCAGCCCATCCTCCAGTGTCCATTCCGGCTCAAAACCGAGTTTCCTAATCTCGCT TATGTCTGCCTGACTGTGTC
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MGSCDVVSPANWADVQITWNITDYSWGIRDLYEYTLNEVIINFSDSLPAGTTMYINVTIYGYNSNTGQYQSDSFTNFTVF TSGWSAALPYIITNKDTQYSYYVSSFFGISPPEIVDIKIVLVGGSNNCTILPIYIEVQKIGVATLSFAPSGSGNVPIDVT ERSGQDLRDYVINFTLGGDWSSLYPYVTDENGNRLYYWYFYDAASQKTWFWVKMNLSANQVNTIYLFYGNQSAYDATYFN PDKVFWFFDDFNGVTLNLSKWNIPTLQNPSNYTVSNGLLELKGGQWLWTKQNFSGSFIIDLYANSLDSTAFPIFYVDSTN YGWAILLNTSLATWGATTYQLNNVTIRGFNLADGSWGAFYYPDGGSRSPIFGKDILITTLINVTSTQAEFYLYENGSLIA TFTQGYSPEQSEPLGLGQWYEYNYTITGPRRNPQLTLSSIINTTSIYDWILVRPYIYPEPEVQVVGQTSGSYTFRIYFKP
Sequences:
>Translated_480_residues MGSCDVVSPANWADVQITWNITDYSWGIRDLYEYTLNEVIINFSDSLPAGTTMYINVTIYGYNSNTGQYQSDSFTNFTVF TSGWSAALPYIITNKDTQYSYYVSSFFGISPPEIVDIKIVLVGGSNNCTILPIYIEVQKIGVATLSFAPSGSGNVPIDVT ERSGQDLRDYVINFTLGGDWSSLYPYVTDENGNRLYYWYFYDAASQKTWFWVKMNLSANQVNTIYLFYGNQSAYDATYFN PDKVFWFFDDFNGVTLNLSKWNIPTLQNPSNYTVSNGLLELKGGQWLWTKQNFSGSFIIDLYANSLDSTAFPIFYVDSTN YGWAILLNTSLATWGATTYQLNNVTIRGFNLADGSWGAFYYPDGGSRSPIFGKDILITTLINVTSTQAEFYLYENGSLIA TFTQGYSPEQSEPLGLGQWYEYNYTITGPRRNPQLTLSSIINTTSIYDWILVRPYIYPEPEVQVVGQTSGSYTFRIYFKP >Mature_479_residues GSCDVVSPANWADVQITWNITDYSWGIRDLYEYTLNEVIINFSDSLPAGTTMYINVTIYGYNSNTGQYQSDSFTNFTVFT SGWSAALPYIITNKDTQYSYYVSSFFGISPPEIVDIKIVLVGGSNNCTILPIYIEVQKIGVATLSFAPSGSGNVPIDVTE RSGQDLRDYVINFTLGGDWSSLYPYVTDENGNRLYYWYFYDAASQKTWFWVKMNLSANQVNTIYLFYGNQSAYDATYFNP DKVFWFFDDFNGVTLNLSKWNIPTLQNPSNYTVSNGLLELKGGQWLWTKQNFSGSFIIDLYANSLDSTAFPIFYVDSTNY GWAILLNTSLATWGATTYQLNNVTIRGFNLADGSWGAFYYPDGGSRSPIFGKDILITTLINVTSTQAEFYLYENGSLIAT FTQGYSPEQSEPLGLGQWYEYNYTITGPRRNPQLTLSSIINTTSIYDWILVRPYIYPEPEVQVVGQTSGSYTFRIYFKP
Specific function: Unknown
COG id: COG5306
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54357; Mature: 54226
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSCDVVSPANWADVQITWNITDYSWGIRDLYEYTLNEVIINFSDSLPAGTTMYINVTIY CCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHEEEEEEECCCCCCCEEEEEEEEEE GYNSNTGQYQSDSFTNFTVFTSGWSAALPYIITNKDTQYSYYVSSFFGISPPEIVDIKIV EEECCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEEE LVGGSNNCTILPIYIEVQKIGVATLSFAPSGSGNVPIDVTERSGQDLRDYVINFTLGGDW EEECCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEEEEEEECCCH SSLYPYVTDENGNRLYYWYFYDAASQKTWFWVKMNLSANQVNTIYLFYGNQSAYDATYFN HHCCCEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEC PDKVFWFFDDFNGVTLNLSKWNIPTLQNPSNYTVSNGLLELKGGQWLWTKQNFSGSFIID CCEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCEEEECCCEEEEEECCCCCCEEEE LYANSLDSTAFPIFYVDSTNYGWAILLNTSLATWGATTYQLNNVTIRGFNLADGSWGAFY EEECCCCCCCEEEEEEECCCCCEEEEEECCEECCCCEEEEECCEEEEEEEECCCCCCEEE YPDGGSRSPIFGKDILITTLINVTSTQAEFYLYENGSLIATFTQGYSPEQSEPLGLGQWY CCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCEE EYNYTITGPRRNPQLTLSSIINTTSIYDWILVRPYIYPEPEVQVVGQTSGSYTFRIYFKP EEEEEEECCCCCCCEEHHHHHCCCCEEEEEEECCEECCCCCEEEEEECCCCEEEEEEECC >Mature Secondary Structure GSCDVVSPANWADVQITWNITDYSWGIRDLYEYTLNEVIINFSDSLPAGTTMYINVTIY CCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHEEEEEEECCCCCCCEEEEEEEEEE GYNSNTGQYQSDSFTNFTVFTSGWSAALPYIITNKDTQYSYYVSSFFGISPPEIVDIKIV EEECCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEEE LVGGSNNCTILPIYIEVQKIGVATLSFAPSGSGNVPIDVTERSGQDLRDYVINFTLGGDW EEECCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCEEEECCCCCCCEEEEEEEEECCCH SSLYPYVTDENGNRLYYWYFYDAASQKTWFWVKMNLSANQVNTIYLFYGNQSAYDATYFN HHCCCEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEC PDKVFWFFDDFNGVTLNLSKWNIPTLQNPSNYTVSNGLLELKGGQWLWTKQNFSGSFIID CCEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCEEEECCCEEEEEECCCCCCEEEE LYANSLDSTAFPIFYVDSTNYGWAILLNTSLATWGATTYQLNNVTIRGFNLADGSWGAFY EEECCCCCCCEEEEEEECCCCCEEEEEECCEECCCCEEEEECCEEEEEEEECCCCCCEEE YPDGGSRSPIFGKDILITTLINVTSTQAEFYLYENGSLIATFTQGYSPEQSEPLGLGQWY CCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCEE EYNYTITGPRRNPQLTLSSIINTTSIYDWILVRPYIYPEPEVQVVGQTSGSYTFRIYFKP EEEEEEECCCCCCCEEHHHHHCCCCEEEEEEECCEECCCCCEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA