Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

Click here to switch to the map view.

The map label for this gene is 212224025

Identifier: 212224025

GI number: 212224025

Start: 805371

End: 805979

Strand: Reverse

Name: 212224025

Synonym: TON_0876

Alternate gene names: NA

Gene position: 805979-805371 (Counterclockwise)

Preceding gene: 212224026

Following gene: 212224024

Centisome position: 43.62

GC content: 50.08

Gene sequence:

>609_bases
ATGAAAAGAGCTTTGTTGGGTTTGGTTTTTGTTTTTGTGGTTTTTCTGAGCGGATGCATAGGCGGTGAAAGTATTTCAAC
AACATCTTCCTCAGTTTCTACGGCGACGACTCTAAGTGAGTGGAAAGCAGACGGTGTTATCGGAGAAAACGAATACTCCC
ATAAGCTCTCACTTGCCAATGACAAGTTTGTTGTATACTGGAGGAACGATGAGGAGTATCTCTACGTGGCCCTCAAGGGG
CAGACAACGGGCTGGGTGGCAATAGGATTTGAGCCGAGCGTTGCAATGAAGGATGCCGACATGATCTTCGGCTGGGTGCA
GGATGGTCAGATCGTGGTCATAGACGCGTACTCGACGGGGACCTATGGGCCTCATCCTCCTGATGGAGAGCTGGGCGGAA
CGAACGATATTCTGGCCTTCGCTGGAAAAGAGGAGAACGGCTACACCGTCATAGAGTTCAAGAGGAAGCTTGACACCGGA
GACAAGTACGATAAGGTCTTCAAGCCAGGGCAGAAAATTAAATTCATCTTCGCGATGGCCGACGTCGACGACTTTACAAC
AAAACACAATATAGCTCGAGGCAGCGGCGAGCTGACCCTTGACGGCTGA

Upstream 100 bases:

>100_bases
ATCCCAGCATGAGACTGAAAAGCAAAAGTAGACAAGGTCGGATTTTATACCGGGAAAAAGTTTATATATGTAGAAAAACT
GATTATTTTAGGTGAATCTA

Downstream 100 bases:

>100_bases
TTTTCCTTTTTGGGGTGAGAAGATGGAGCACTTCCGAGTACATGCTATCATCCAGACTCTTGCCCTTCTAAGCTTTCTGA
TAGGAATTTACTACGCAAAG

Product: DOMON

Products: NA

Alternate protein names: DOMON Domain Protein; Domon Domain Protein

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKRALLGLVFVFVVFLSGCIGGESISTTSSSVSTATTLSEWKADGVIGENEYSHKLSLANDKFVVYWRNDEEYLYVALKG
QTTGWVAIGFEPSVAMKDADMIFGWVQDGQIVVIDAYSTGTYGPHPPDGELGGTNDILAFAGKEENGYTVIEFKRKLDTG
DKYDKVFKPGQKIKFIFAMADVDDFTTKHNIARGSGELTLDG

Sequences:

>Translated_202_residues
MKRALLGLVFVFVVFLSGCIGGESISTTSSSVSTATTLSEWKADGVIGENEYSHKLSLANDKFVVYWRNDEEYLYVALKG
QTTGWVAIGFEPSVAMKDADMIFGWVQDGQIVVIDAYSTGTYGPHPPDGELGGTNDILAFAGKEENGYTVIEFKRKLDTG
DKYDKVFKPGQKIKFIFAMADVDDFTTKHNIARGSGELTLDG
>Mature_202_residues
MKRALLGLVFVFVVFLSGCIGGESISTTSSSVSTATTLSEWKADGVIGENEYSHKLSLANDKFVVYWRNDEEYLYVALKG
QTTGWVAIGFEPSVAMKDADMIFGWVQDGQIVVIDAYSTGTYGPHPPDGELGGTNDILAFAGKEENGYTVIEFKRKLDTG
DKYDKVFKPGQKIKFIFAMADVDDFTTKHNIARGSGELTLDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI281366611, Length=110, Percent_Identity=32.7272727272727, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22078; Mature: 22078

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50836 DOMON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRALLGLVFVFVVFLSGCIGGESISTTSSSVSTATTLSEWKADGVIGENEYSHKLSLAN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECC
DKFVVYWRNDEEYLYVALKGQTTGWVAIGFEPSVAMKDADMIFGWVQDGQIVVIDAYSTG
CEEEEEEECCCEEEEEEEECCCCEEEEECCCCCCEEECCCEEEEEECCCEEEEEECCCCC
TYGPHPPDGELGGTNDILAFAGKEENGYTVIEFKRKLDTGDKYDKVFKPGQKIKFIFAMA
CCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCHHHHCCCCCEEEEEEEEE
DVDDFTTKHNIARGSGELTLDG
CCCCHHHHCCEECCCCCEEECC
>Mature Secondary Structure
MKRALLGLVFVFVVFLSGCIGGESISTTSSSVSTATTLSEWKADGVIGENEYSHKLSLAN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECC
DKFVVYWRNDEEYLYVALKGQTTGWVAIGFEPSVAMKDADMIFGWVQDGQIVVIDAYSTG
CEEEEEEECCCEEEEEEEECCCCEEEEECCCCCCEEECCCEEEEEECCCEEEEEECCCCC
TYGPHPPDGELGGTNDILAFAGKEENGYTVIEFKRKLDTGDKYDKVFKPGQKIKFIFAMA
CCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCHHHHCCCCCEEEEEEEEE
DVDDFTTKHNIARGSGELTLDG
CCCCHHHHCCEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA