| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224022
Identifier: 212224022
GI number: 212224022
Start: 803936
End: 804415
Strand: Reverse
Name: 212224022
Synonym: TON_0873
Alternate gene names: NA
Gene position: 804415-803936 (Counterclockwise)
Preceding gene: 212224024
Following gene: 212224021
Centisome position: 43.54
GC content: 49.79
Gene sequence:
>480_bases ATGAAGGAGATTGAGACTTTAGCTTTGGCTTTGGAAGTCGAGAAGACCGAGCTGAAGTTCTACCTAGAGCTGGCCAAAAA GGCCAAGGATGATAGGGCAAGAAGGATGTTCTTATTTTTGGCCCACGAGGAGGCTGGACACTGGAGCCTGTTTGAGGAAA AGTTCGTCGAGGCCTTGATAGAGAAGTGCGAGCTGCCCTCGGTGGATAGGAAAACTCTCGAAAAGCTTTTGGTTAAAGTG GACGAAAAAAACCTCAGTGAAGTCGATGCGGTAAGGATTGGAATGGAGCAGGAAAAGCTGACATGGGAGTTCTACGAGCG GGCGGCAAAGGAGGCCGAGCATGAGGGTGTCAGGCGTATTTTTGAAGAGCTCGCAAAGGTCGAGAAGTCCCACTATGAGC TGCTTAAAGCACAGTACGACTCCGTCATGAAGACGGGCATATGGATGGACTACATGGATTTCAGCCTCGAGGTTGACTGA
Upstream 100 bases:
>100_bases CTCATCTTTTAGCTTGATGGGAATTTCGATCATTTCAATCCCCACTTTCGATCACCAAAGGTTATTAGTCAGAAGCTCAA TAAAACTCTTTGGTGGTATC
Downstream 100 bases:
>100_bases GGAAGCGTTATAACTTTCAGGGACGATATATGGACGGTGATTCCATGCTGGGTTTGAACCCCATTTCCATAGACAAAGAA AAGCTGTCAAAGAAGGAAAT
Product: rubrerythrin-related protein
Products: NA
Alternate protein names: Rubrerythrin; Rubrerythrin Domain Protein
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKEIETLALALEVEKTELKFYLELAKKAKDDRARRMFLFLAHEEAGHWSLFEEKFVEALIEKCELPSVDRKTLEKLLVKV DEKNLSEVDAVRIGMEQEKLTWEFYERAAKEAEHEGVRRIFEELAKVEKSHYELLKAQYDSVMKTGIWMDYMDFSLEVD
Sequences:
>Translated_159_residues MKEIETLALALEVEKTELKFYLELAKKAKDDRARRMFLFLAHEEAGHWSLFEEKFVEALIEKCELPSVDRKTLEKLLVKV DEKNLSEVDAVRIGMEQEKLTWEFYERAAKEAEHEGVRRIFEELAKVEKSHYELLKAQYDSVMKTGIWMDYMDFSLEVD >Mature_159_residues MKEIETLALALEVEKTELKFYLELAKKAKDDRARRMFLFLAHEEAGHWSLFEEKFVEALIEKCELPSVDRKTLEKLLVKV DEKNLSEVDAVRIGMEQEKLTWEFYERAAKEAEHEGVRRIFEELAKVEKSHYELLKAQYDSVMKTGIWMDYMDFSLEVD
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18855; Mature: 18855
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIETLALALEVEKTELKFYLELAKKAKDDRARRMFLFLAHEEAGHWSLFEEKFVEALI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHH EKCELPSVDRKTLEKLLVKVDEKNLSEVDAVRIGMEQEKLTWEFYERAAKEAEHEGVRRI HHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FEELAKVEKSHYELLKAQYDSVMKTGIWMDYMDFSLEVD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEECC >Mature Secondary Structure MKEIETLALALEVEKTELKFYLELAKKAKDDRARRMFLFLAHEEAGHWSLFEEKFVEALI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHH EKCELPSVDRKTLEKLLVKVDEKNLSEVDAVRIGMEQEKLTWEFYERAAKEAEHEGVRRI HHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FEELAKVEKSHYELLKAQYDSVMKTGIWMDYMDFSLEVD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA