| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223991
Identifier: 212223991
GI number: 212223991
Start: 780711
End: 781514
Strand: Reverse
Name: 212223991
Synonym: TON_0842
Alternate gene names: NA
Gene position: 781514-780711 (Counterclockwise)
Preceding gene: 212223992
Following gene: 212223990
Centisome position: 42.3
GC content: 39.8
Gene sequence:
>804_bases ATGATTGTAGCAGGGAGCATTTATCTAACGGCTGGAATAGTTCTAATGCTTCTCCGTTTCACACCACTTAAGGATAAAAT CCTTGAAAGGCTTGAATTTAAAGTTAAAACCCAAGAACACTTCTCAAGGCGAGACCTCCTGCTATTAGCTTTTATAGTGC TCTTTGGCTCTTTTTTGGCACCACTCTCCTTTATGTTTGGACTTGATAAAACAACAGCGGTCAATGCATCCCTTCTACTC AATACTGAAACATTGTTCACAGTTTTAATCGCTCTCTTAATCTTTAAAGAGAAAGCTTCAAGAAGAAGCATTCTTGGAAT TCTCTTAATCTTAATTGGAGCTGCTGTAATCTCGACGGGAAACTTTAGGGAAGTGGAGCTGAGCAAGGGCATCCTTGGGA ACATTTTAATAATCTTGGCAGGTCTTTCATGGGCGATAGACAATAATTTGAGCAAGTTGCTAAGCGTTAAGAGGGATTTG CTCTTGGTAACTTCACTAAAGGGGCTGTTTGGAGGGAGTGCGCTATTAATTTTGGCTTCTCTAATTGGAATTCCCTTCTA TATCCCGCTTCAAAGCTTTCCATACATTTTAACTGTCGGTGCGTTTAGCTTAGGCTTCTCCATCGTGCTATTTCTATTTG CTCTAAGAGAAATTGGGGCTATGAAAACAGGGGCAATTTTTTCAACTTCCTCACTAATTGGTGCTCTCTTTGCTTTTTTA GTCCTTGGGGAGAGCTTTACAGCAATTAAAGCATTTTTTGGCGTTTTAATGCTCTTTGGAGTATATCTGCTCTCTTTAGA GTGA
Upstream 100 bases:
>100_bases CATGACCCACCATTATGGCTATGTGAGCGCTCTCTTAGCAGCACTGCTCTTTGGAATAAGCTCAACGCTGAACAAGATCT CCCTTAGAGATGTCCATCCA
Downstream 100 bases:
>100_bases CTTTACTTACTTCTGTTCAGAAATCTTTATAATAATATTTCTTTGACGCTTTAGGCAACCCCACAAGGCTTAAGATACTT TTCGCACTGCTGGAGGATGA
Product: putative transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MIVAGSIYLTAGIVLMLLRFTPLKDKILERLEFKVKTQEHFSRRDLLLLAFIVLFGSFLAPLSFMFGLDKTTAVNASLLL NTETLFTVLIALLIFKEKASRRSILGILLILIGAAVISTGNFREVELSKGILGNILIILAGLSWAIDNNLSKLLSVKRDL LLVTSLKGLFGGSALLILASLIGIPFYIPLQSFPYILTVGAFSLGFSIVLFLFALREIGAMKTGAIFSTSSLIGALFAFL VLGESFTAIKAFFGVLMLFGVYLLSLE
Sequences:
>Translated_267_residues MIVAGSIYLTAGIVLMLLRFTPLKDKILERLEFKVKTQEHFSRRDLLLLAFIVLFGSFLAPLSFMFGLDKTTAVNASLLL NTETLFTVLIALLIFKEKASRRSILGILLILIGAAVISTGNFREVELSKGILGNILIILAGLSWAIDNNLSKLLSVKRDL LLVTSLKGLFGGSALLILASLIGIPFYIPLQSFPYILTVGAFSLGFSIVLFLFALREIGAMKTGAIFSTSSLIGALFAFL VLGESFTAIKAFFGVLMLFGVYLLSLE >Mature_267_residues MIVAGSIYLTAGIVLMLLRFTPLKDKILERLEFKVKTQEHFSRRDLLLLAFIVLFGSFLAPLSFMFGLDKTTAVNASLLL NTETLFTVLIALLIFKEKASRRSILGILLILIGAAVISTGNFREVELSKGILGNILIILAGLSWAIDNNLSKLLSVKRDL LLVTSLKGLFGGSALLILASLIGIPFYIPLQSFPYILTVGAFSLGFSIVLFLFALREIGAMKTGAIFSTSSLIGALFAFL VLGESFTAIKAFFGVLMLFGVYLLSLE
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 29038; Mature: 29038
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVAGSIYLTAGIVLMLLRFTPLKDKILERLEFKVKTQEHFSRRDLLLLAFIVLFGSFLA CEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLSFMFGLDKTTAVNASLLLNTETLFTVLIALLIFKEKASRRSILGILLILIGAAVISTG HHHHHHCCCCHHHCCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NFREVELSKGILGNILIILAGLSWAIDNNLSKLLSVKRDLLLVTSLKGLFGGSALLILAS CCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LIGIPFYIPLQSFPYILTVGAFSLGFSIVLFLFALREIGAMKTGAIFSTSSLIGALFAFL HHCCCEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VLGESFTAIKAFFGVLMLFGVYLLSLE HHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIVAGSIYLTAGIVLMLLRFTPLKDKILERLEFKVKTQEHFSRRDLLLLAFIVLFGSFLA CEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLSFMFGLDKTTAVNASLLLNTETLFTVLIALLIFKEKASRRSILGILLILIGAAVISTG HHHHHHCCCCHHHCCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NFREVELSKGILGNILIILAGLSWAIDNNLSKLLSVKRDLLLVTSLKGLFGGSALLILAS CCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LIGIPFYIPLQSFPYILTVGAFSLGFSIVLFLFALREIGAMKTGAIFSTSSLIGALFAFL HHCCCEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VLGESFTAIKAFFGVLMLFGVYLLSLE HHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]