| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is yjjG [C]
Identifier: 212223966
GI number: 212223966
Start: 758366
End: 759094
Strand: Reverse
Name: yjjG [C]
Synonym: TON_0817
Alternate gene names: 212223966
Gene position: 759094-758366 (Counterclockwise)
Preceding gene: 212223967
Following gene: 212223965
Centisome position: 41.09
GC content: 51.44
Gene sequence:
>729_bases ATGATAAGAGTCGTGTTCTTTGACCTCGACGACACGCTCGTTGACACGAGCAAACTCGCCGAGATGGCCAGGAAAAACGC TATAGAGAACATGGTACGCCACGGGCTTCCCGTTGATTTTGAAACCGCTTACCATGAGCTCCTCGAGCTCATAAACGAGT ACGGAAGCAACTTTGGGAGGCACTTCGACTACCTCCTGAGGAGGCTTGACCTACCGAACAACCCCAAGTGGATAGCCGCA GGAGTTATAGCGTATCACAACACCAAGTTCGCCTACCTCAAAAGCGTCAAGGGCGCTAGAAAAGTCCTCCTCGAGCTCAA GAAAGATGGCTTTGGCCTCGGGGTGATTACCGACGGCGACCCCATAAAACAGTGGGAAAAGATACTCCGCCTCGAGCTCG ATGAATATTTTGATGAGGTCTTTATATCCAACGATCTCGGCGTTAAGAAGCCTCACAGAAAGATATTTGAGAAGGCCCTG CGGAAGTTCAACGTCGAGCCCCACGAGGCGCTGATGGTCGGTGACAGGCTGTACTCGGACATCTACGGGGCGAAGCAGGT TGGCATGAGGACAGTATGGTTTAAATATGGGAAGTACGCCAACCGCGAGCTGGACTATCTGGAGTATGCGGACTTCGCGA TCAAGTCATTGGGAGAAGTTCTAGAGATCGTCAGGGGGCTGAACCTTGAAGAGAAAGAGCGTGCAGATAAGGAAGTTCAT GCTGATTGA
Upstream 100 bases:
>100_bases CATGAGGTGGGCGAGGAGGCAGGTGAGTGAGAGGAAAGGCCCGTTCCTCGGCCTTGGGAAGGATTAAATAGGAGAAAAGC GTAGGGATGGTGGTGACTAG
Downstream 100 bases:
>100_bases CAGCGCCTACAAATCAAGGATTCTCAGGGGAGACAAGGTCACAACGATAAGGTATGGGGACTACGAGGCCAAGCCTGGAA GCGAGATTTACCTAGTCATC
Product: hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MIRVVFFDLDDTLVDTSKLAEMARKNAIENMVRHGLPVDFETAYHELLELINEYGSNFGRHFDYLLRRLDLPNNPKWIAA GVIAYHNTKFAYLKSVKGARKVLLELKKDGFGLGVITDGDPIKQWEKILRLELDEYFDEVFISNDLGVKKPHRKIFEKAL RKFNVEPHEALMVGDRLYSDIYGAKQVGMRTVWFKYGKYANRELDYLEYADFAIKSLGEVLEIVRGLNLEEKERADKEVH AD
Sequences:
>Translated_242_residues MIRVVFFDLDDTLVDTSKLAEMARKNAIENMVRHGLPVDFETAYHELLELINEYGSNFGRHFDYLLRRLDLPNNPKWIAA GVIAYHNTKFAYLKSVKGARKVLLELKKDGFGLGVITDGDPIKQWEKILRLELDEYFDEVFISNDLGVKKPHRKIFEKAL RKFNVEPHEALMVGDRLYSDIYGAKQVGMRTVWFKYGKYANRELDYLEYADFAIKSLGEVLEIVRGLNLEEKERADKEVH AD >Mature_242_residues MIRVVFFDLDDTLVDTSKLAEMARKNAIENMVRHGLPVDFETAYHELLELINEYGSNFGRHFDYLLRRLDLPNNPKWIAA GVIAYHNTKFAYLKSVKGARKVLLELKKDGFGLGVITDGDPIKQWEKILRLELDEYFDEVFISNDLGVKKPHRKIFEKAL RKFNVEPHEALMVGDRLYSDIYGAKQVGMRTVWFKYGKYANRELDYLEYADFAIKSLGEVLEIVRGLNLEEKERADKEVH AD
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1790833, Length=113, Percent_Identity=34.5132743362832, Blast_Score=65, Evalue=5e-12, Organism=Drosophila melanogaster, GI28571108, Length=244, Percent_Identity=30.7377049180328, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI45552117, Length=155, Percent_Identity=34.1935483870968, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR011950 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 28136; Mature: 28136
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVVFFDLDDTLVDTSKLAEMARKNAIENMVRHGLPVDFETAYHELLELINEYGSNFGR CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH HFDYLLRRLDLPNNPKWIAAGVIAYHNTKFAYLKSVKGARKVLLELKKDGFGLGVITDGD HHHHHHHHHCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC PIKQWEKILRLELDEYFDEVFISNDLGVKKPHRKIFEKALRKFNVEPHEALMVGDRLYSD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IYGAKQVGMRTVWFKYGKYANRELDYLEYADFAIKSLGEVLEIVRGLNLEEKERADKEVH HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC AD CC >Mature Secondary Structure MIRVVFFDLDDTLVDTSKLAEMARKNAIENMVRHGLPVDFETAYHELLELINEYGSNFGR CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH HFDYLLRRLDLPNNPKWIAAGVIAYHNTKFAYLKSVKGARKVLLELKKDGFGLGVITDGD HHHHHHHHHCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC PIKQWEKILRLELDEYFDEVFISNDLGVKKPHRKIFEKALRKFNVEPHEALMVGDRLYSD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IYGAKQVGMRTVWFKYGKYANRELDYLEYADFAIKSLGEVLEIVRGLNLEEKERADKEVH HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC AD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA