Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is yqgV [H]

Identifier: 212223927

GI number: 212223927

Start: 725713

End: 725994

Strand: Reverse

Name: yqgV [H]

Synonym: TON_0778

Alternate gene names: 212223927

Gene position: 725994-725713 (Counterclockwise)

Preceding gene: 212223928

Following gene: 212223926

Centisome position: 39.29

GC content: 51.77

Gene sequence:

>282_bases
ATGGCAGTAGCGGAGCTTTGTCTTTTTCCCCTTGGAACAGAAAGCCCGAGTGTGGGCAAGTACCTCGAACCCGTTATCGA
AGTCATAAAGGCGAGTGGCCTAAAGTACCAGGTCTGCCCGATGGGAACTGTGGTTGAAGGTTCCGTAGAGGAAATCCTCG
AGCTTGTCAAGGCCTGCCATGATGCTATCCTAAAAGCGGGGGCAAAGCGCATCGTCATAAGCCTCAAGATAGACGACCGC
GTTGATAAACCTCTCACCATAGAGAGCAAGATGGGTGTCTGA

Upstream 100 bases:

>100_bases
TCCTCGTGAACGGCCACAACGTCCTGCACCTTAAAGGCCTCGACACCGAGCTGAAGGACGATGACGAGGTGCACATCTTC
CCGCCCGCGGGGGGCGGCTG

Downstream 100 bases:

>100_bases
ATGGCCGAGTACTTCAACAGAATTGCCGGGCGCTACGACGACTGGTACCGGACGAAAACCGGTCAGTACGTAGACAGAAC
CGAGAAGTGGTTAGTCTTCT

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MAVAELCLFPLGTESPSVGKYLEPVIEVIKASGLKYQVCPMGTVVEGSVEEILELVKACHDAILKAGAKRIVISLKIDDR
VDKPLTIESKMGV

Sequences:

>Translated_93_residues
MAVAELCLFPLGTESPSVGKYLEPVIEVIKASGLKYQVCPMGTVVEGSVEEILELVKACHDAILKAGAKRIVISLKIDDR
VDKPLTIESKMGV
>Mature_92_residues
AVAELCLFPLGTESPSVGKYLEPVIEVIKASGLKYQVCPMGTVVEGSVEEILELVKACHDAILKAGAKRIVISLKIDDRV
DKPLTIESKMGV

Specific function: Unknown

COG id: COG0011

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0045 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002767
- InterPro:   IPR016198 [H]

Pfam domain/function: PF01910 DUF77 [H]

EC number: NA

Molecular weight: Translated: 9983; Mature: 9852

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAELCLFPLGTESPSVGKYLEPVIEVIKASGLKYQVCPMGTVVEGSVEEILELVKACH
CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHH
DAILKAGAKRIVISLKIDDRVDKPLTIESKMGV
HHHHHCCCCEEEEEEEECCCCCCCEECCCCCCC
>Mature Secondary Structure 
AVAELCLFPLGTESPSVGKYLEPVIEVIKASGLKYQVCPMGTVVEGSVEEILELVKACH
CHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHH
DAILKAGAKRIVISLKIDDRVDKPLTIESKMGV
HHHHHCCCCEEEEEEEECCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]