| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212223903
Identifier: 212223903
GI number: 212223903
Start: 702389
End: 702925
Strand: Reverse
Name: 212223903
Synonym: TON_0754
Alternate gene names: NA
Gene position: 702925-702389 (Counterclockwise)
Preceding gene: 212223904
Following gene: 212223902
Centisome position: 38.05
GC content: 48.6
Gene sequence:
>537_bases ATGAACCGCTTCGTGAACAGGGAGGTCGAGCTGAGAGCCATAAAGGAGAAGTTAATGAGTGGGAAGTTTAAACTCATCGT AATATACGGAAGGAGGCGTGTTGGAAAGACCCGTCTCGTACTTGAGGCCGTTAAAGACTTTCCTCACGTGTATTACTTGG CGGTTGAAGGCGACAACCTCAGGCACTTTCGAGGGACTGCTGAAAGGGTGTTTCTCAAGGTAAGGTACGCCCGCGAGGAC TGGGAAGGACTTCTGCACGCGTTGAAGGGGAAAATAATAATCGACGAGTTTCCTAACCTGATCCAAGAAGATCCTGAAGT ACTCTCCCTGTTTCAGAGGGCGGTTGGCCTTGATCTCTCGGGGTCAAAGACTAAACTGATACTCCTTGGTTCTTCAGTGA GTATGATGACTGAGAAGGTGTTGAGTTACAAAAGCCCACTCTACGGTAGGAGAACGGGCTCCATGAAGTTAAAACCGATG AAGTTTTTTTACCTTGAGGGAGTTCTTTCCCAGGGCGAGCTTGGAAGAGCTCGTTGA
Upstream 100 bases:
>100_bases ATTTTCTGAGTTTCCAAAAGTGGTTTAGAGTTCGGATCGTGGTTCTCAATCCACCGAAATTCTTGAAGATGATAACGTGC ATTATATGGTGATTATCATA
Downstream 100 bases:
>100_bases GATTTTGAGCTTCCCTTTTGGGAGTGGCTTGAAAAGGAACTACTCAATCCGGTGAGCTTTTTTAGGGAAGAGGTTGATTT CCTCCTCAGGTATGAGTTCA
Product: DEXX-box atpase, N-terminus
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNRFVNREVELRAIKEKLMSGKFKLIVIYGRRRVGKTRLVLEAVKDFPHVYYLAVEGDNLRHFRGTAERVFLKVRYARED WEGLLHALKGKIIIDEFPNLIQEDPEVLSLFQRAVGLDLSGSKTKLILLGSSVSMMTEKVLSYKSPLYGRRTGSMKLKPM KFFYLEGVLSQGELGRAR
Sequences:
>Translated_178_residues MNRFVNREVELRAIKEKLMSGKFKLIVIYGRRRVGKTRLVLEAVKDFPHVYYLAVEGDNLRHFRGTAERVFLKVRYARED WEGLLHALKGKIIIDEFPNLIQEDPEVLSLFQRAVGLDLSGSKTKLILLGSSVSMMTEKVLSYKSPLYGRRTGSMKLKPM KFFYLEGVLSQGELGRAR >Mature_178_residues MNRFVNREVELRAIKEKLMSGKFKLIVIYGRRRVGKTRLVLEAVKDFPHVYYLAVEGDNLRHFRGTAERVFLKVRYARED WEGLLHALKGKIIIDEFPNLIQEDPEVLSLFQRAVGLDLSGSKTKLILLGSSVSMMTEKVLSYKSPLYGRRTGSMKLKPM KFFYLEGVLSQGELGRAR
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011579 - InterPro: IPR004256 - InterPro: IPR011335 - InterPro: IPR011991 [H]
Pfam domain/function: PF01637 Arch_ATPase; PF03008 DUF234 [H]
EC number: NA
Molecular weight: Translated: 20510; Mature: 20510
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFVNREVELRAIKEKLMSGKFKLIVIYGRRRVGKTRLVLEAVKDFPHVYYLAVEGDNL CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEECCCC RHFRGTAERVFLKVRYAREDWEGLLHALKGKIIIDEFPNLIQEDPEVLSLFQRAVGLDLS HHHCCHHHHEEEEEEHHHHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCC GSKTKLILLGSSVSMMTEKVLSYKSPLYGRRTGSMKLKPMKFFYLEGVLSQGELGRAR CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHEEHHHHCCCCCCCCC >Mature Secondary Structure MNRFVNREVELRAIKEKLMSGKFKLIVIYGRRRVGKTRLVLEAVKDFPHVYYLAVEGDNL CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEECCCC RHFRGTAERVFLKVRYAREDWEGLLHALKGKIIIDEFPNLIQEDPEVLSLFQRAVGLDLS HHHCCHHHHEEEEEEHHHHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCC GSKTKLILLGSSVSMMTEKVLSYKSPLYGRRTGSMKLKPMKFFYLEGVLSQGELGRAR CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHEEHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]