Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223903

Identifier: 212223903

GI number: 212223903

Start: 702389

End: 702925

Strand: Reverse

Name: 212223903

Synonym: TON_0754

Alternate gene names: NA

Gene position: 702925-702389 (Counterclockwise)

Preceding gene: 212223904

Following gene: 212223902

Centisome position: 38.05

GC content: 48.6

Gene sequence:

>537_bases
ATGAACCGCTTCGTGAACAGGGAGGTCGAGCTGAGAGCCATAAAGGAGAAGTTAATGAGTGGGAAGTTTAAACTCATCGT
AATATACGGAAGGAGGCGTGTTGGAAAGACCCGTCTCGTACTTGAGGCCGTTAAAGACTTTCCTCACGTGTATTACTTGG
CGGTTGAAGGCGACAACCTCAGGCACTTTCGAGGGACTGCTGAAAGGGTGTTTCTCAAGGTAAGGTACGCCCGCGAGGAC
TGGGAAGGACTTCTGCACGCGTTGAAGGGGAAAATAATAATCGACGAGTTTCCTAACCTGATCCAAGAAGATCCTGAAGT
ACTCTCCCTGTTTCAGAGGGCGGTTGGCCTTGATCTCTCGGGGTCAAAGACTAAACTGATACTCCTTGGTTCTTCAGTGA
GTATGATGACTGAGAAGGTGTTGAGTTACAAAAGCCCACTCTACGGTAGGAGAACGGGCTCCATGAAGTTAAAACCGATG
AAGTTTTTTTACCTTGAGGGAGTTCTTTCCCAGGGCGAGCTTGGAAGAGCTCGTTGA

Upstream 100 bases:

>100_bases
ATTTTCTGAGTTTCCAAAAGTGGTTTAGAGTTCGGATCGTGGTTCTCAATCCACCGAAATTCTTGAAGATGATAACGTGC
ATTATATGGTGATTATCATA

Downstream 100 bases:

>100_bases
GATTTTGAGCTTCCCTTTTGGGAGTGGCTTGAAAAGGAACTACTCAATCCGGTGAGCTTTTTTAGGGAAGAGGTTGATTT
CCTCCTCAGGTATGAGTTCA

Product: DEXX-box atpase, N-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MNRFVNREVELRAIKEKLMSGKFKLIVIYGRRRVGKTRLVLEAVKDFPHVYYLAVEGDNLRHFRGTAERVFLKVRYARED
WEGLLHALKGKIIIDEFPNLIQEDPEVLSLFQRAVGLDLSGSKTKLILLGSSVSMMTEKVLSYKSPLYGRRTGSMKLKPM
KFFYLEGVLSQGELGRAR

Sequences:

>Translated_178_residues
MNRFVNREVELRAIKEKLMSGKFKLIVIYGRRRVGKTRLVLEAVKDFPHVYYLAVEGDNLRHFRGTAERVFLKVRYARED
WEGLLHALKGKIIIDEFPNLIQEDPEVLSLFQRAVGLDLSGSKTKLILLGSSVSMMTEKVLSYKSPLYGRRTGSMKLKPM
KFFYLEGVLSQGELGRAR
>Mature_178_residues
MNRFVNREVELRAIKEKLMSGKFKLIVIYGRRRVGKTRLVLEAVKDFPHVYYLAVEGDNLRHFRGTAERVFLKVRYARED
WEGLLHALKGKIIIDEFPNLIQEDPEVLSLFQRAVGLDLSGSKTKLILLGSSVSMMTEKVLSYKSPLYGRRTGSMKLKPM
KFFYLEGVLSQGELGRAR

Specific function: Unknown

COG id: COG1672

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011579
- InterPro:   IPR004256
- InterPro:   IPR011335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01637 Arch_ATPase; PF03008 DUF234 [H]

EC number: NA

Molecular weight: Translated: 20510; Mature: 20510

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFVNREVELRAIKEKLMSGKFKLIVIYGRRRVGKTRLVLEAVKDFPHVYYLAVEGDNL
CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEECCCC
RHFRGTAERVFLKVRYAREDWEGLLHALKGKIIIDEFPNLIQEDPEVLSLFQRAVGLDLS
HHHCCHHHHEEEEEEHHHHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCC
GSKTKLILLGSSVSMMTEKVLSYKSPLYGRRTGSMKLKPMKFFYLEGVLSQGELGRAR
CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHEEHHHHCCCCCCCCC
>Mature Secondary Structure
MNRFVNREVELRAIKEKLMSGKFKLIVIYGRRRVGKTRLVLEAVKDFPHVYYLAVEGDNL
CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEECCCC
RHFRGTAERVFLKVRYAREDWEGLLHALKGKIIIDEFPNLIQEDPEVLSLFQRAVGLDLS
HHHCCHHHHEEEEEEHHHHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHHHHCCCCC
GSKTKLILLGSSVSMMTEKVLSYKSPLYGRRTGSMKLKPMKFFYLEGVLSQGELGRAR
CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHEEHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]