Click here to switch to the map view.

The map label for this gene is 212223846

Identifier: 212223846

GI number: 212223846

Start: 649968

End: 650927

Strand: Reverse

Name: 212223846

Synonym: TON_0697

Alternate gene names: NA

Gene position: 650927-649968 (Counterclockwise)

Preceding gene: 212223849

Following gene: 212223843

Centisome position: 35.23

GC content: 51.98

Gene sequence:

>960_bases
ATGATGGACAGGGAGAGACTCATAAGAACCGTTGAGGCAATACTCAGAGGCACGGGCTACAAAACTGCCAGAATAGAGTT
TAAAGGCGCGTGCTTTGATATAGTGGCGAGCAGGTTACTTCTGTTGCTCTTCATTAAAGTGGCGACCAATATAGACACCG
TAACCGAGGAGCAGGCAGAGGATTTGAAGAGGCTCTCCAAGTTCTTTAAGGCCTCACCGCTCATTGTCGGTCTAAGAAGC
AAGAACGCCGAGCTCGAGGAGGGTGTTGTCTACGAGCGCTTTGGCATCTATGCCCTGAGGCCGGAAACTCTCTACGATGT
CCTCATCGAGAACGAATTGCCAGCTATCTTTGCCGAGCGCGGCGGCTTCTACGTTAGAATAAACGGCAGGCTTTTGAAAC
ACCTCCGCGAGAAGCATGGCTATTCCGTGAATGAGCTGGCTCAGCTCGTGGGAGTCTCCAGGAAGAGCCTCCTCAACTAC
GAGAAGGGCGAACAGGCGGTTTCCCTTGAGGTAGCAATCCGCCTCGAAGAGCTTTTTGACGAGCCCCTTGCCGAGCCTAT
CGACATACTCCACTCGACTGTCGAGGCCAACCTTGACGTCACACCGGAGACTCCCCTCGAAAAGGAAATCTTCGAGCAGC
TCAAGGGGCTTGGGCTCGGTGTCGTCAAGGTCAAGAAGGCTCCCTTTAACGCGGTTTCAAAGGAAGACAAGTTCAAGATA
CTCACAGGCATAGACGAGAAGAAGACCCGCTCAACGGTCAAGCGTGCAGAGATGGTTGCGGAGGTAAGCAGGATAATCAA
CAGCGACGGTGTCTTCATCCTGGAGAAGACCAAGACTGAGGTCGTCAAGGAGGTGCCTCTCATACCCAAGGAGAGCCTCC
AAGAGGTTAAAGATGCCGATGAGCTCATAGAAATGATTGAGGAGCTGAAAAAGGAGATAAAGAAACAGCTCTTCAGCTGA

Upstream 100 bases:

>100_bases
CCTCGCGCAGAAGTATCCCGAGTGAAACAAGGTTCCCTTCAAGGATTATCGGCCTCATGCAAACACCTTAACTTTATTAA
GGTATTTCACTTATTTAAAA

Downstream 100 bases:

>100_bases
AGATGACCTTTTTCCAGACTTCTCTAACTTTGCCGACGTATTCTTTCGGAGAGGCTATGAGAACGGCCCACCGGGGTGTC
TGTCTTCTCTTGAGAGCATT

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MMDRERLIRTVEAILRGTGYKTARIEFKGACFDIVASRLLLLLFIKVATNIDTVTEEQAEDLKRLSKFFKASPLIVGLRS
KNAELEEGVVYERFGIYALRPETLYDVLIENELPAIFAERGGFYVRINGRLLKHLREKHGYSVNELAQLVGVSRKSLLNY
EKGEQAVSLEVAIRLEELFDEPLAEPIDILHSTVEANLDVTPETPLEKEIFEQLKGLGLGVVKVKKAPFNAVSKEDKFKI
LTGIDEKKTRSTVKRAEMVAEVSRIINSDGVFILEKTKTEVVKEVPLIPKESLQEVKDADELIEMIEELKKEIKKQLFS

Sequences:

>Translated_319_residues
MMDRERLIRTVEAILRGTGYKTARIEFKGACFDIVASRLLLLLFIKVATNIDTVTEEQAEDLKRLSKFFKASPLIVGLRS
KNAELEEGVVYERFGIYALRPETLYDVLIENELPAIFAERGGFYVRINGRLLKHLREKHGYSVNELAQLVGVSRKSLLNY
EKGEQAVSLEVAIRLEELFDEPLAEPIDILHSTVEANLDVTPETPLEKEIFEQLKGLGLGVVKVKKAPFNAVSKEDKFKI
LTGIDEKKTRSTVKRAEMVAEVSRIINSDGVFILEKTKTEVVKEVPLIPKESLQEVKDADELIEMIEELKKEIKKQLFS
>Mature_319_residues
MMDRERLIRTVEAILRGTGYKTARIEFKGACFDIVASRLLLLLFIKVATNIDTVTEEQAEDLKRLSKFFKASPLIVGLRS
KNAELEEGVVYERFGIYALRPETLYDVLIENELPAIFAERGGFYVRINGRLLKHLREKHGYSVNELAQLVGVSRKSLLNY
EKGEQAVSLEVAIRLEELFDEPLAEPIDILHSTVEANLDVTPETPLEKEIFEQLKGLGLGVVKVKKAPFNAVSKEDKFKI
LTGIDEKKTRSTVKRAEMVAEVSRIINSDGVFILEKTKTEVVKEVPLIPKESLQEVKDADELIEMIEELKKEIKKQLFS

Specific function: Unknown

COG id: COG1395

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR020886
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 36191; Mature: 36191

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDRERLIRTVEAILRGTGYKTARIEFKGACFDIVASRLLLLLFIKVATNIDTVTEEQAE
CCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
DLKRLSKFFKASPLIVGLRSKNAELEEGVVYERFGIYALRPETLYDVLIENELPAIFAER
HHHHHHHHHCCCCEEEEECCCCCCHHCCEEHHHHCEEEECHHHHHHHHHHCCCCHHHHHC
GGFYVRINGRLLKHLREKHGYSVNELAQLVGVSRKSLLNYEKGEQAVSLEVAIRLEELFD
CCEEEEECHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCEEEHHHHHHHHHHHC
EPLAEPIDILHSTVEANLDVTPETPLEKEIFEQLKGLGLGVVKVKKAPFNAVSKEDKFKI
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEE
LTGIDEKKTRSTVKRAEMVAEVSRIINSDGVFILEKTKTEVVKEVPLIPKESLQEVKDAD
EECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHH
ELIEMIEELKKEIKKQLFS
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDRERLIRTVEAILRGTGYKTARIEFKGACFDIVASRLLLLLFIKVATNIDTVTEEQAE
CCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
DLKRLSKFFKASPLIVGLRSKNAELEEGVVYERFGIYALRPETLYDVLIENELPAIFAER
HHHHHHHHHCCCCEEEEECCCCCCHHCCEEHHHHCEEEECHHHHHHHHHHCCCCHHHHHC
GGFYVRINGRLLKHLREKHGYSVNELAQLVGVSRKSLLNYEKGEQAVSLEVAIRLEELFD
CCEEEEECHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCEEEHHHHHHHHHHHC
EPLAEPIDILHSTVEANLDVTPETPLEKEIFEQLKGLGLGVVKVKKAPFNAVSKEDKFKI
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEE
LTGIDEKKTRSTVKRAEMVAEVSRIINSDGVFILEKTKTEVVKEVPLIPKESLQEVKDAD
EECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHH
ELIEMIEELKKEIKKQLFS
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA