| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212223842
Identifier: 212223842
GI number: 212223842
Start: 645060
End: 646199
Strand: Reverse
Name: 212223842
Synonym: TON_0693
Alternate gene names: NA
Gene position: 646199-645060 (Counterclockwise)
Preceding gene: 212223843
Following gene: 212223841
Centisome position: 34.97
GC content: 41.75
Gene sequence:
>1140_bases ATGGGATGGGTTTGGAAATCCCCAAAGGAGTACGGGGTGAGAAAATTGGATAGTATTCAGGCGATTGTTTTTGTGGAGGC AATAATGGTACTTATGGCAGATTTGGTGGCAGCTGGATGGATATTTAAGATATATCTTCATAATAAAAGGAGATCTGCCT TAGCATTCTCTCTGGCTTGGATTTTCGATTTTCTTGCGATTTCTTCTACGGTCTTTACAAACCCAATATTTCAGATGCTT GGGGTTCTATTTCTTCCGGCATTTTCGGCGTTAATGTTCTACGGATCCGTAAAGTTCCTTGAGGAGGAGTCTATTGTAGC TAGACATAAAACCCTTACTATATTTGCCCCTATGCCTGTTTTTTTCATTGTTTATATGATGGGTGTCTATGCATACACTA AGGATCCCTTTTGGACAGCAACTAGCGCTGCAACACTGGGTATAAGTGGTATCTTCGTGATAGCGGGCGGGTTATTACTG AAGGAGACTGAAGAGATATACAAAACTGCCATTAAGATCCTTTATGTTAGCATAATTCTCTTTGGAGTCCATCTTGTACC TGCCGCGCTGTTCGGAACTAATGAGTGGTATAAACCAATCGGGTTTACCCTATCTACAGTTCTAATAGTTACTATGGTAG CCGCAATGGTGAAACTCACATCATCGGAATTCTTCAAACCTCCAAAAAGAGATGATGGTAACCCCATTAATCTCGAGCCT GGAGTTGTTTTAGTCAGTGAAACCGAATATCAAAAGATCAAGGAAAAGCTAAGAGGTCGGCCAGTACTTGCATTTATTAG GGATGTGGATGACATTCCAGAAGGGTGGAAATACTACTTTGTTACAACGATACCCTTCCAGGGCAAATTTAAGAACACTA TAAATCCCACCAATCTCGCAAGGATAACCGAGATTTCTTACAGGTATCTTGAAGAGTTCGCAAAATCCGGTGAACATGGG ATTATCGTAATTGACTGCCTTGAATATCTCACGATTTACAACTCGTGGGAGAGCCTCATGAAGTTCCTGTCAAAGTTGAG GGACTTTGTAATTGTCCACAGAGGAACTCTAATAGTTGTCCTCGAAAAGGAAAGCCTAGAAACCCAGCTCTACGCCCAGC TCAAGAAGCTCATTGGGTGA
Upstream 100 bases:
>100_bases AACGGGGTAGGGTTGGCATAATAGTAGCCAGACCTGAGGTTCTAGTGATTAAATTTGAAGATGAGACTGCCATTAGGGCT CCCCCTGAAGGGCCATTCAA
Downstream 100 bases:
>100_bases AGGCAACTTTATATACCTCTTCTTTTCCATCTTATATCGCCCCTGCGCGAGGACCCCGGGGAGAATGAACCGGGGGGCGA TGCAGGGGCTACAGCTCGGC
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MGWVWKSPKEYGVRKLDSIQAIVFVEAIMVLMADLVAAGWIFKIYLHNKRRSALAFSLAWIFDFLAISSTVFTNPIFQML GVLFLPAFSALMFYGSVKFLEEESIVARHKTLTIFAPMPVFFIVYMMGVYAYTKDPFWTATSAATLGISGIFVIAGGLLL KETEEIYKTAIKILYVSIILFGVHLVPAALFGTNEWYKPIGFTLSTVLIVTMVAAMVKLTSSEFFKPPKRDDGNPINLEP GVVLVSETEYQKIKEKLRGRPVLAFIRDVDDIPEGWKYYFVTTIPFQGKFKNTINPTNLARITEISYRYLEEFAKSGEHG IIVIDCLEYLTIYNSWESLMKFLSKLRDFVIVHRGTLIVVLEKESLETQLYAQLKKLIG
Sequences:
>Translated_379_residues MGWVWKSPKEYGVRKLDSIQAIVFVEAIMVLMADLVAAGWIFKIYLHNKRRSALAFSLAWIFDFLAISSTVFTNPIFQML GVLFLPAFSALMFYGSVKFLEEESIVARHKTLTIFAPMPVFFIVYMMGVYAYTKDPFWTATSAATLGISGIFVIAGGLLL KETEEIYKTAIKILYVSIILFGVHLVPAALFGTNEWYKPIGFTLSTVLIVTMVAAMVKLTSSEFFKPPKRDDGNPINLEP GVVLVSETEYQKIKEKLRGRPVLAFIRDVDDIPEGWKYYFVTTIPFQGKFKNTINPTNLARITEISYRYLEEFAKSGEHG IIVIDCLEYLTIYNSWESLMKFLSKLRDFVIVHRGTLIVVLEKESLETQLYAQLKKLIG >Mature_378_residues GWVWKSPKEYGVRKLDSIQAIVFVEAIMVLMADLVAAGWIFKIYLHNKRRSALAFSLAWIFDFLAISSTVFTNPIFQMLG VLFLPAFSALMFYGSVKFLEEESIVARHKTLTIFAPMPVFFIVYMMGVYAYTKDPFWTATSAATLGISGIFVIAGGLLLK ETEEIYKTAIKILYVSIILFGVHLVPAALFGTNEWYKPIGFTLSTVLIVTMVAAMVKLTSSEFFKPPKRDDGNPINLEPG VVLVSETEYQKIKEKLRGRPVLAFIRDVDDIPEGWKYYFVTTIPFQGKFKNTINPTNLARITEISYRYLEEFAKSGEHGI IVIDCLEYLTIYNSWESLMKFLSKLRDFVIVHRGTLIVVLEKESLETQLYAQLKKLIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43086; Mature: 42955
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWVWKSPKEYGVRKLDSIQAIVFVEAIMVLMADLVAAGWIFKIYLHNKRRSALAFSLAW CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHH IFDFLAISSTVFTNPIFQMLGVLFLPAFSALMFYGSVKFLEEESIVARHKTLTIFAPMPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEEECHHH FFIVYMMGVYAYTKDPFWTATSAATLGISGIFVIAGGLLLKETEEIYKTAIKILYVSIIL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH FGVHLVPAALFGTNEWYKPIGFTLSTVLIVTMVAAMVKLTSSEFFKPPKRDDGNPINLEP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GVVLVSETEYQKIKEKLRGRPVLAFIRDVDDIPEGWKYYFVTTIPFQGKFKNTINPTNLA CEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHH RITEISYRYLEEFAKSGEHGIIVIDCLEYLTIYNSWESLMKFLSKLRDFVIVHRGTLIVV HHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEE LEKESLETQLYAQLKKLIG EECCHHHHHHHHHHHHHCC >Mature Secondary Structure GWVWKSPKEYGVRKLDSIQAIVFVEAIMVLMADLVAAGWIFKIYLHNKRRSALAFSLAW CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHH IFDFLAISSTVFTNPIFQMLGVLFLPAFSALMFYGSVKFLEEESIVARHKTLTIFAPMPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCEEEEEECHHH FFIVYMMGVYAYTKDPFWTATSAATLGISGIFVIAGGLLLKETEEIYKTAIKILYVSIIL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH FGVHLVPAALFGTNEWYKPIGFTLSTVLIVTMVAAMVKLTSSEFFKPPKRDDGNPINLEP HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GVVLVSETEYQKIKEKLRGRPVLAFIRDVDDIPEGWKYYFVTTIPFQGKFKNTINPTNLA CEEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHH RITEISYRYLEEFAKSGEHGIIVIDCLEYLTIYNSWESLMKFLSKLRDFVIVHRGTLIVV HHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEE LEKESLETQLYAQLKKLIG EECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA