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The map label for this gene is ssuB [H]

Identifier: 212223754

GI number: 212223754

Start: 557499

End: 559424

Strand: Reverse

Name: ssuB [H]

Synonym: TON_0606

Alternate gene names: 212223754

Gene position: 559424-557499 (Counterclockwise)

Preceding gene: 212223755

Following gene: 212223750

Centisome position: 30.28

GC content: 54.05

Gene sequence:

>1926_bases
ATGATTCTTCGGGGTCGGGTTGTCGGGAGCGAAATCCCGCGCTTCAAGCATCGATGGTTTGGGATTCTTGAGGTTGAAAC
TGAGGAAGGAAAGTTCAGACTCTACATGACGGGCAACGTTGCCCAGTGGTTCCTGACGGGCGATGAAGTGGAGATAAAGG
TAAAGGAAAAGCCACAAGAGGAGAACGGCGTTAAAGTCCTCAACTTCGACGACTATGAGCTCTATAAGTTCTACTCTGGC
GACAAGATAAAGGCCTGGCCCCTCTGGGAGAAGGAGGTAGAGGCCAAGCGCTTCTCCCCACTCACGGGGGAGCTCCTCTA
CACGTACAAGCTGAGAGCGAGAGAAGCCAAATACGAGAGCGACTTCGAAGCCATAGCCGAGCTGGAGCAATATCACTACG
CCAGCCAGAAGGAAACGGTGGCATTGTGGCGCTGTGAGAACGGCCACATCTTCGAGGCAAACACCAAGCAGAAGTGCCCA
GTCTGCGGCACTGAAAGCCATATTCTCGAGATTAAAGGCTCTACTCCAGCTTCTCGCTTCCTGCTCCTTGAACTCGTCGA
GAGGGAGGAGTACGAGCCCAGGATTTTAGCCTACGTAAGAATTGATCCGCCGATTCCGCTGATGCACAGACGGTTGCCCA
ACGGTGAAATTGAAAGGAACATCCGTGAGAAAGTCTTTCCCGAGGACTGGTTCCATCCGGCATTCTGGCCAGAGAAGATC
ATGAAAGAACTCTACGAGGAGCTCAAAAGGAATCACGGAAGAAAGGTAGCGCGTTCCCTCCTATGGGAAGAGGCTAAGTG
GAGAGCTTTGAAAGAAACCAACACCGCTGGCGCTAGAATTGCGCGTGTTGTGGTTCATCCGGACTACCGTTCCGATGGCT
TGGGCCAGCTGGGTGTTAGGGCTGCCCTTGAGTGGATAGCCGAGCGCAGGGTCCCGGAGATGAGAAAGAGGAAACACATA
GTAGAGACTATAGCGCAGATGGCCCGCTACAACCCCTTCTTCGAGAAGGTCGGCTTCAAGTTCCTCTGGGAGACGGCAAG
CGGAAGGCCTGTCCTCTTCTATCCACTTACTGAAGAGGCCAAAGAATACATCGAGCGCTTCCTTCACAAAGACCCCTACG
TACCAGAGGACGGTCGCCTGTGGAGGCCGAGCTACGGTAAGGTCGAGCCTCTGAGCGGCCCGATAGTCTTTAAGAACGTC
AGCAAGGTCTTCGAGAGCGAGCTCGACGTTAAAGGATTACCTGAGGAGATCCAAGAACTGCTGAAAGCCTTTGGAGTCAG
GCACAGGGTTATACAGCGTCCAGTTTTGAGGAACCTTAACTTTGAGATAAAGCCTGGAGAGCTGATAGCGGTAGTCGGTG
CGAGCGGAGCTGGAAAGACGACCCTGCTGAGGCTCATCCTCGGAGCGGCGAGGGGCTACTGGGAGGAAAAGTACAGACCG
AGTGAAGGAGAAATCAGCGTCCCGGAGAACGTCAAGGTTTCCGTGCTTATACCCGGAGAATTCGAGCCTTCCTTTGGCTC
CGAGAGCATATTGGAGCATGTGTACAGAAAGATTAGAGACCTCAACGCGGCTGTGGAGGTGCTCAACAGGGCTGGACTGA
GCGACGCAGTTCTCTACCGCGCAAAGTTTGGTGAGCTCTCTACAGGTCAGAAGGAAAGGGCAAAGATAGCTTCACTCCTC
GCTGAGAAGCCAAATCTCCTCCTCATGGACGAGTTTGCAGCTCATCTCGATACGCTCACGGCCATGAGAGTGGCCAAAAA
GGTGGCCGAGATTATCAGGGAGGCCGGCATCACCGCCCTCATAATCACCCACAGGCCAGAGGTGCTGAAGGCTCTGGACC
CGGATAAGGTGCTCTTCGTCGGCTACGGAACGGCAAGGGTTGAGGCTAAAGGGAAATCCCGGGAAGAGGGCCGTAAATCA
GCATGA

Upstream 100 bases:

>100_bases
ATGAGCAGTGATCAGAATGGCTCGTGGTGCCACGAAGGGATTAATGGTGAAGGAGAACAGTTATTAATTTCATTTCTCCA
ATTATCGATGGTGATAGCTG

Downstream 100 bases:

>100_bases
GGAGACCAACCAGCAGGGGCTGATGGACGAGATATATGCCGAGAGTGTGCCTGCCGGCCACGCAGAGGGCTAAAACGAGA
GGGTTTGCGGGGATTCTCAA

Product: ABC-type transporter, ATPase component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 641; Mature: 641

Protein sequence:

>641_residues
MILRGRVVGSEIPRFKHRWFGILEVETEEGKFRLYMTGNVAQWFLTGDEVEIKVKEKPQEENGVKVLNFDDYELYKFYSG
DKIKAWPLWEKEVEAKRFSPLTGELLYTYKLRAREAKYESDFEAIAELEQYHYASQKETVALWRCENGHIFEANTKQKCP
VCGTESHILEIKGSTPASRFLLLELVEREEYEPRILAYVRIDPPIPLMHRRLPNGEIERNIREKVFPEDWFHPAFWPEKI
MKELYEELKRNHGRKVARSLLWEEAKWRALKETNTAGARIARVVVHPDYRSDGLGQLGVRAALEWIAERRVPEMRKRKHI
VETIAQMARYNPFFEKVGFKFLWETASGRPVLFYPLTEEAKEYIERFLHKDPYVPEDGRLWRPSYGKVEPLSGPIVFKNV
SKVFESELDVKGLPEEIQELLKAFGVRHRVIQRPVLRNLNFEIKPGELIAVVGASGAGKTTLLRLILGAARGYWEEKYRP
SEGEISVPENVKVSVLIPGEFEPSFGSESILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFGELSTGQKERAKIASLL
AEKPNLLLMDEFAAHLDTLTAMRVAKKVAEIIREAGITALIITHRPEVLKALDPDKVLFVGYGTARVEAKGKSREEGRKS
A

Sequences:

>Translated_641_residues
MILRGRVVGSEIPRFKHRWFGILEVETEEGKFRLYMTGNVAQWFLTGDEVEIKVKEKPQEENGVKVLNFDDYELYKFYSG
DKIKAWPLWEKEVEAKRFSPLTGELLYTYKLRAREAKYESDFEAIAELEQYHYASQKETVALWRCENGHIFEANTKQKCP
VCGTESHILEIKGSTPASRFLLLELVEREEYEPRILAYVRIDPPIPLMHRRLPNGEIERNIREKVFPEDWFHPAFWPEKI
MKELYEELKRNHGRKVARSLLWEEAKWRALKETNTAGARIARVVVHPDYRSDGLGQLGVRAALEWIAERRVPEMRKRKHI
VETIAQMARYNPFFEKVGFKFLWETASGRPVLFYPLTEEAKEYIERFLHKDPYVPEDGRLWRPSYGKVEPLSGPIVFKNV
SKVFESELDVKGLPEEIQELLKAFGVRHRVIQRPVLRNLNFEIKPGELIAVVGASGAGKTTLLRLILGAARGYWEEKYRP
SEGEISVPENVKVSVLIPGEFEPSFGSESILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFGELSTGQKERAKIASLL
AEKPNLLLMDEFAAHLDTLTAMRVAKKVAEIIREAGITALIITHRPEVLKALDPDKVLFVGYGTARVEAKGKSREEGRKS
A
>Mature_641_residues
MILRGRVVGSEIPRFKHRWFGILEVETEEGKFRLYMTGNVAQWFLTGDEVEIKVKEKPQEENGVKVLNFDDYELYKFYSG
DKIKAWPLWEKEVEAKRFSPLTGELLYTYKLRAREAKYESDFEAIAELEQYHYASQKETVALWRCENGHIFEANTKQKCP
VCGTESHILEIKGSTPASRFLLLELVEREEYEPRILAYVRIDPPIPLMHRRLPNGEIERNIREKVFPEDWFHPAFWPEKI
MKELYEELKRNHGRKVARSLLWEEAKWRALKETNTAGARIARVVVHPDYRSDGLGQLGVRAALEWIAERRVPEMRKRKHI
VETIAQMARYNPFFEKVGFKFLWETASGRPVLFYPLTEEAKEYIERFLHKDPYVPEDGRLWRPSYGKVEPLSGPIVFKNV
SKVFESELDVKGLPEEIQELLKAFGVRHRVIQRPVLRNLNFEIKPGELIAVVGASGAGKTTLLRLILGAARGYWEEKYRP
SEGEISVPENVKVSVLIPGEFEPSFGSESILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFGELSTGQKERAKIASLL
AEKPNLLLMDEFAAHLDTLTAMRVAKKVAEIIREAGITALIITHRPEVLKALDPDKVLFVGYGTARVEAKGKSREEGRKS
A

Specific function: Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system [H]

COG id: COG2401

COG function: function code R; ABC-type ATPase fused to a predicted acetyltransferase domain

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI90421313, Length=209, Percent_Identity=29.1866028708134, Blast_Score=72, Evalue=2e-12,
Organism=Escherichia coli, GI87081791, Length=207, Percent_Identity=30.4347826086957, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787105, Length=192, Percent_Identity=32.2916666666667, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1787370, Length=229, Percent_Identity=28.3842794759825, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787041, Length=224, Percent_Identity=27.6785714285714, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI87081709, Length=203, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786698, Length=214, Percent_Identity=26.1682242990654, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1786975, Length=216, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789751, Length=208, Percent_Identity=28.8461538461538, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI193208177, Length=225, Percent_Identity=30.6666666666667, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71992290, Length=219, Percent_Identity=27.3972602739726, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71984940, Length=233, Percent_Identity=28.755364806867, Blast_Score=73, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI193209708, Length=226, Percent_Identity=28.7610619469027, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=171, Percent_Identity=28.0701754385965, Blast_Score=66, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017875
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 73846; Mature: 73846

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRGRVVGSEIPRFKHRWFGILEVETEEGKFRLYMTGNVAQWFLTGDEVEIKVKEKPQE
CEEECCCCCCCCCHHHHHHEEEEEEEECCCEEEEEEECCEEEEEEECCEEEEEECCCCCC
ENGVKVLNFDDYELYKFYSGDKIKAWPLWEKEVEAKRFSPLTGELLYTYKLRAREAKYES
CCCEEEEECCCCEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCH
DFEAIAELEQYHYASQKETVALWRCENGHIFEANTKQKCPVCGTESHILEIKGSTPASRF
HHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHH
LLLELVEREEYEPRILAYVRIDPPIPLMHRRLPNGEIERNIREKVFPEDWFHPAFWPEKI
HHHHHHHHCCCCCEEEEEEEECCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH
MKELYEELKRNHGRKVARSLLWEEAKWRALKETNTAGARIARVVVHPDYRSDGLGQLGVR
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHH
AALEWIAERRVPEMRKRKHIVETIAQMARYNPFFEKVGFKFLWETASGRPVLFYPLTEEA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCEEEEECCCHHH
KEYIERFLHKDPYVPEDGRLWRPSYGKVEPLSGPIVFKNVSKVFESELDVKGLPEEIQEL
HHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHH
LKAFGVRHRVIQRPVLRNLNFEIKPGELIAVVGASGAGKTTLLRLILGAARGYWEEKYRP
HHHHCHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHCCCC
SEGEISVPENVKVSVLIPGEFEPSFGSESILEHVYRKIRDLNAAVEVLNRAGLSDAVLYR
CCCCEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AKFGELSTGQKERAKIASLLAEKPNLLLMDEFAAHLDTLTAMRVAKKVAEIIREAGITAL
HHCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
IITHRPEVLKALDPDKVLFVGYGTARVEAKGKSREEGRKSA
EEECCHHHHHHCCCCCEEEEECCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MILRGRVVGSEIPRFKHRWFGILEVETEEGKFRLYMTGNVAQWFLTGDEVEIKVKEKPQE
CEEECCCCCCCCCHHHHHHEEEEEEEECCCEEEEEEECCEEEEEEECCEEEEEECCCCCC
ENGVKVLNFDDYELYKFYSGDKIKAWPLWEKEVEAKRFSPLTGELLYTYKLRAREAKYES
CCCEEEEECCCCEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCH
DFEAIAELEQYHYASQKETVALWRCENGHIFEANTKQKCPVCGTESHILEIKGSTPASRF
HHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHH
LLLELVEREEYEPRILAYVRIDPPIPLMHRRLPNGEIERNIREKVFPEDWFHPAFWPEKI
HHHHHHHHCCCCCEEEEEEEECCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH
MKELYEELKRNHGRKVARSLLWEEAKWRALKETNTAGARIARVVVHPDYRSDGLGQLGVR
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHH
AALEWIAERRVPEMRKRKHIVETIAQMARYNPFFEKVGFKFLWETASGRPVLFYPLTEEA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCEEEEECCCHHH
KEYIERFLHKDPYVPEDGRLWRPSYGKVEPLSGPIVFKNVSKVFESELDVKGLPEEIQEL
HHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHHH
LKAFGVRHRVIQRPVLRNLNFEIKPGELIAVVGASGAGKTTLLRLILGAARGYWEEKYRP
HHHHCHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHCCCC
SEGEISVPENVKVSVLIPGEFEPSFGSESILEHVYRKIRDLNAAVEVLNRAGLSDAVLYR
CCCCEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AKFGELSTGQKERAKIASLLAEKPNLLLMDEFAAHLDTLTAMRVAKKVAEIIREAGITAL
HHCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
IITHRPEVLKALDPDKVLFVGYGTARVEAKGKSREEGRKSA
EEECCHHHHHHCCCCCEEEEECCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA