| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223729
Identifier: 212223729
GI number: 212223729
Start: 534728
End: 535198
Strand: Reverse
Name: 212223729
Synonym: TON_0581
Alternate gene names: NA
Gene position: 535198-534728 (Counterclockwise)
Preceding gene: 212223730
Following gene: 212223727
Centisome position: 28.97
GC content: 50.96
Gene sequence:
>471_bases ATGCTCGTAAACGAGACCAAGGGCAGGATATGGCACGGAAGGGTAAGGCTCGCAGACACGTTCTTCAAGCGGTTTAGAGG CCTAATGCTGGTTAGAGACATCAACTACGCGCTTGTTTTTGTATTGCCAGCCGAAACGAGGGCTAACGCTTCGATTCACA TGTTCTTCATGCTGAGTGATATCGACGTTATCTGGCTTGACTCCTCCCGCCGCGTGGTGGATTTCAAGACCGCCAGGAAG TGGCGAGTCTATGTCCCTAAGAAGGCCGCCCGGTACATCATTGAGGGCCCGGTTGGGATGATAAACGTCCTCGAGGTTGA GGAAGGGGATTTAATAAGATGGTCACCAACCGAGGAGAAAAACAAGGCCGTTCCTGTAAAGATTTCGCTGCCGGAGAAGA TTTCCTTTGAAGGCTCGAACGGCATAGCGATTGCCGAGAGCGTTAAGGAAATAAGGACGGAGAAAGCTTAA
Upstream 100 bases:
>100_bases CTTTGAGCTCGGTGAGAAAGCAAAGAAAGGCGAGCTCTGAGTTCGTCTATTTTTCTTTCATTTCCCAAAAACTTATCAAC CGGGGAGTAGAGTTGGTTCT
Downstream 100 bases:
>100_bases AACTCAAACTCCACTCCGTTTCCCTCTCCTTCCAAGAGAACTATCCTCTGGAGTCTGACATCCTTAGGGAGCCTCTTCTC AATCTCTTTCGCTATCCAGA
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MLVNETKGRIWHGRVRLADTFFKRFRGLMLVRDINYALVFVLPAETRANASIHMFFMLSDIDVIWLDSSRRVVDFKTARK WRVYVPKKAARYIIEGPVGMINVLEVEEGDLIRWSPTEEKNKAVPVKISLPEKISFEGSNGIAIAESVKEIRTEKA
Sequences:
>Translated_156_residues MLVNETKGRIWHGRVRLADTFFKRFRGLMLVRDINYALVFVLPAETRANASIHMFFMLSDIDVIWLDSSRRVVDFKTARK WRVYVPKKAARYIIEGPVGMINVLEVEEGDLIRWSPTEEKNKAVPVKISLPEKISFEGSNGIAIAESVKEIRTEKA >Mature_156_residues MLVNETKGRIWHGRVRLADTFFKRFRGLMLVRDINYALVFVLPAETRANASIHMFFMLSDIDVIWLDSSRRVVDFKTARK WRVYVPKKAARYIIEGPVGMINVLEVEEGDLIRWSPTEEKNKAVPVKISLPEKISFEGSNGIAIAESVKEIRTEKA
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0127 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y581_THEON (B6YUN2)
Other databases:
- EMBL: CP000855 - RefSeq: YP_002306965.1 - GeneID: 7016879 - GenomeReviews: CP000855_GR - KEGG: ton:TON_0581 - HOGENOM: HBG727034 - OMA: ASIHMFF - ProtClustDB: PRK03760 - HAMAP: MF_00263 - InterPro: IPR003795 - InterPro: IPR022906
Pfam domain/function: PF02643 DUF192
EC number: NA
Molecular weight: Translated: 17951; Mature: 17951
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVNETKGRIWHGRVRLADTFFKRFRGLMLVRDINYALVFVLPAETRANASIHMFFMLSD CCCCCCCCCEEEEEEEEHHHHHHHHCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEECC IDVIWLDSSRRVVDFKTARKWRVYVPKKAARYIIEGPVGMINVLEVEEGDLIRWSPTEEK CEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCEEEECCCCCC NKAVPVKISLPEKISFEGSNGIAIAESVKEIRTEKA CCEEEEEEECCCEEEECCCCCEEHHHHHHHHHHCCC >Mature Secondary Structure MLVNETKGRIWHGRVRLADTFFKRFRGLMLVRDINYALVFVLPAETRANASIHMFFMLSD CCCCCCCCCEEEEEEEEHHHHHHHHCCEEEEEECCEEEEEEECCCCCCCCEEEEEEEECC IDVIWLDSSRRVVDFKTARKWRVYVPKKAARYIIEGPVGMINVLEVEEGDLIRWSPTEEK CEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCEEEECCCCCC NKAVPVKISLPEKISFEGSNGIAIAESVKEIRTEKA CCEEEEEEECCCEEEECCCCCEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA