Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

Click here to switch to the map view.

The map label for this gene is 212223714

Identifier: 212223714

GI number: 212223714

Start: 519291

End: 520895

Strand: Reverse

Name: 212223714

Synonym: TON_0566

Alternate gene names: NA

Gene position: 520895-519291 (Counterclockwise)

Preceding gene: 212223716

Following gene: 212223713

Centisome position: 28.19

GC content: 54.14

Gene sequence:

>1605_bases
ATGATTTTGGGAATCCACGACGGCCACGATGCGGGAGCTGTGCTGATAGACGGCGAGAGTATCTTCGCGGTTAACGAAGA
GAGGCTGAACCGGGTTAAGAAGTACCGAGGATTTCCAACTCTCAGCGTGAGGAAAGTCCTCGAGATGGCGGGTGTTTCGC
CCGAGGAAGTTGAAATCATAGCCATTGCTGGCATCTTCCGGAAGCAGAAGCGGCTCTTAGAGCTTGAGAACAACCTGCAC
GTCATTTTCGGGCCGGATTTCAAGAGGAAAGTTCTCTTCGTTGAGCATCACTTAGCTCACTCTGCGAGTGCCTACTACAC
GAGCGGCTGGAAGGATGCTATAGCCCTGAGCATAGACGCCGCTGGAGATGGGTTGAGCTCATCAATCTATATCGCGAGAG
ATGGAGAGATGATTAAAATCGCCCAGAGCACCTATCTAGACTCCCTCGGCGACTTCTACGCATCTGTTACGGAGCTCCTT
GGCTTTAAGCCAATGCGCCACGAGGGCAAGGTGATGAGCCTGGCAGCATACGGAAGGCCCACCTATGATTTGAGCAATAT
CATAGAGCTGAACGGTTTAACCTTCGACAACCACCTCAAACTCATAGGCGTTGAAGCTACGAGGAAGCTGGCCGAGCTAT
TCAGCTATCCCTTGAGCAGGGCTAAAGAAATCGCAGGGCAGATGAAGCGCGGGAAGCTCGACGGGGAACTCCAAAGAAGG
GCAATAGAGATAGCGGCCAGCGCTCAGGCACACCTCGAAAAGCTCATTGACGAGCTAGGCCTCAAGCTGAAGGAGTACGG
TCTTCCGCTCGCCTACGCCGGCGGAGTTGCCCAGAACGTCAAGGCCAACGCCATTTTGAGAAAGCTCTTCCCAAGCTTGT
GGGTGTTCCCGGCAATGGACGATGGAGGACTGGCTTTTGGAGCGGCAATCTTCGTCAAGGCGCAGCTTGAGAGACTTGAC
AGCAAATGGAAACCATTCAAGCTTGAGCACGTCTACCTTGGGCCGGACTACTCAAAGGACGAGGTAGAGGGATTCCTGAG
GAGGGAGGGTGCCGAGTTCGAGGAGGTAGACGACGTCCCGGGCTTCGTCGCCGATTCCTTAGTTGATAGAAAAATCGTCG
CCTTTTTCCAGGGAAGGATGGAGTTTGGACCAAGGGCCCTGGGCAACCGCTCTATTTTAGCCGACCCAAGGGACGATGGA
GTTAAGGAGAGACTCAACGTGGCCCTAAAGCGCGATGTCTTCCAGCCATTTGCTCCTTCGATGCTCGAGGAGAGAGCGAG
AGAGTATCTGGCGGATCTCAACGGTGAGCCCAACAGGTTCATGACGATGAGCTACACCGCGAGCGAGGAGTTTAGAAGGG
AAGCTCCAGCGGTTGTTCATGTGGATGGGACGACGAGGCCGCAGAGCGTTGTGAGGGAGCTCAACCCAGTTTACTACGAC
ATCATAAAGGCCTTTGAGAGGAGAACGGGTCTTGGGGCGGTATTAAACACCAGCTTCAACATGCACGGTGAACCAATAGT
CTGCTCGCCGAAGGACGCGCTGGGAAGCTTCAGAAAGGCTGGGTTGGACGTGCTGGTTCTTGGGGGATTTGTCGTCCATC
AATGA

Upstream 100 bases:

>100_bases
CCTCTTCATGGTTCCACCTCCTTCAAATGTATTCATTCGGCAGGGCTTTTAAATTCTTCCCTCCCCTAATGTTTAAAAAA
CGAACATCGAATGCACAACC

Downstream 100 bases:

>100_bases
AATTTACTATTCTTTGATGTCCATCTTTTTGCCAAGGTAAAGTTATAAACATTGGGCCGAAGAACTTTCGGTGATGTTCA
TGGCGCTGAGCGACAGGTTA

Product: carbamoyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MILGIHDGHDAGAVLIDGESIFAVNEERLNRVKKYRGFPTLSVRKVLEMAGVSPEEVEIIAIAGIFRKQKRLLELENNLH
VIFGPDFKRKVLFVEHHLAHSASAYYTSGWKDAIALSIDAAGDGLSSSIYIARDGEMIKIAQSTYLDSLGDFYASVTELL
GFKPMRHEGKVMSLAAYGRPTYDLSNIIELNGLTFDNHLKLIGVEATRKLAELFSYPLSRAKEIAGQMKRGKLDGELQRR
AIEIAASAQAHLEKLIDELGLKLKEYGLPLAYAGGVAQNVKANAILRKLFPSLWVFPAMDDGGLAFGAAIFVKAQLERLD
SKWKPFKLEHVYLGPDYSKDEVEGFLRREGAEFEEVDDVPGFVADSLVDRKIVAFFQGRMEFGPRALGNRSILADPRDDG
VKERLNVALKRDVFQPFAPSMLEERAREYLADLNGEPNRFMTMSYTASEEFRREAPAVVHVDGTTRPQSVVRELNPVYYD
IIKAFERRTGLGAVLNTSFNMHGEPIVCSPKDALGSFRKAGLDVLVLGGFVVHQ

Sequences:

>Translated_534_residues
MILGIHDGHDAGAVLIDGESIFAVNEERLNRVKKYRGFPTLSVRKVLEMAGVSPEEVEIIAIAGIFRKQKRLLELENNLH
VIFGPDFKRKVLFVEHHLAHSASAYYTSGWKDAIALSIDAAGDGLSSSIYIARDGEMIKIAQSTYLDSLGDFYASVTELL
GFKPMRHEGKVMSLAAYGRPTYDLSNIIELNGLTFDNHLKLIGVEATRKLAELFSYPLSRAKEIAGQMKRGKLDGELQRR
AIEIAASAQAHLEKLIDELGLKLKEYGLPLAYAGGVAQNVKANAILRKLFPSLWVFPAMDDGGLAFGAAIFVKAQLERLD
SKWKPFKLEHVYLGPDYSKDEVEGFLRREGAEFEEVDDVPGFVADSLVDRKIVAFFQGRMEFGPRALGNRSILADPRDDG
VKERLNVALKRDVFQPFAPSMLEERAREYLADLNGEPNRFMTMSYTASEEFRREAPAVVHVDGTTRPQSVVRELNPVYYD
IIKAFERRTGLGAVLNTSFNMHGEPIVCSPKDALGSFRKAGLDVLVLGGFVVHQ
>Mature_534_residues
MILGIHDGHDAGAVLIDGESIFAVNEERLNRVKKYRGFPTLSVRKVLEMAGVSPEEVEIIAIAGIFRKQKRLLELENNLH
VIFGPDFKRKVLFVEHHLAHSASAYYTSGWKDAIALSIDAAGDGLSSSIYIARDGEMIKIAQSTYLDSLGDFYASVTELL
GFKPMRHEGKVMSLAAYGRPTYDLSNIIELNGLTFDNHLKLIGVEATRKLAELFSYPLSRAKEIAGQMKRGKLDGELQRR
AIEIAASAQAHLEKLIDELGLKLKEYGLPLAYAGGVAQNVKANAILRKLFPSLWVFPAMDDGGLAFGAAIFVKAQLERLD
SKWKPFKLEHVYLGPDYSKDEVEGFLRREGAEFEEVDDVPGFVADSLVDRKIVAFFQGRMEFGPRALGNRSILADPRDDG
VKERLNVALKRDVFQPFAPSMLEERAREYLADLNGEPNRFMTMSYTASEEFRREAPAVVHVDGTTRPQSVVRELNPVYYD
IIKAFERRTGLGAVLNTSFNMHGEPIVCSPKDALGSFRKAGLDVLVLGGFVVHQ

Specific function: Unknown

COG id: COG2192

COG function: function code O; Predicted carbamoyl transferase, NodU family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NodU/CmcH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003696 [H]

Pfam domain/function: PF02543 CmcH_NodU [H]

EC number: NA

Molecular weight: Translated: 59367; Mature: 59367

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILGIHDGHDAGAVLIDGESIFAVNEERLNRVKKYRGFPTLSVRKVLEMAGVSPEEVEII
CEEEEECCCCCCEEEECCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEE
AIAGIFRKQKRLLELENNLHVIFGPDFKRKVLFVEHHLAHSASAYYTSGWKDAIALSIDA
EEHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCEEEEEEEC
AGDGLSSSIYIARDGEMIKIAQSTYLDSLGDFYASVTELLGFKPMRHEGKVMSLAAYGRP
CCCCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
TYDLSNIIELNGLTFDNHLKLIGVEATRKLAELFSYPLSRAKEIAGQMKRGKLDGELQRR
CCCHHHEEEECCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AIEIAASAQAHLEKLIDELGLKLKEYGLPLAYAGGVAQNVKANAILRKLFPSLWVFPAMD
HHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCHHCHHHHHHHHHHHHHHEEEECCC
DGGLAFGAAIFVKAQLERLDSKWKPFKLEHVYLGPDYSKDEVEGFLRREGAEFEEVDDVP
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCC
GFVADSLVDRKIVAFFQGRMEFGPRALGNRSILADPRDDGVKERLNVALKRDVFQPFAPS
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHH
MLEERAREYLADLNGEPNRFMTMSYTASEEFRREAPAVVHVDGTTRPQSVVRELNPVYYD
HHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHCCCEEEEECCCCCHHHHHHHHCHHHHH
IIKAFERRTGLGAVLNTSFNMHGEPIVCSPKDALGSFRKAGLDVLVLGGFVVHQ
HHHHHHHCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHCCCCEEEECCEEECC
>Mature Secondary Structure
MILGIHDGHDAGAVLIDGESIFAVNEERLNRVKKYRGFPTLSVRKVLEMAGVSPEEVEII
CEEEEECCCCCCEEEECCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEE
AIAGIFRKQKRLLELENNLHVIFGPDFKRKVLFVEHHLAHSASAYYTSGWKDAIALSIDA
EEHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCEEEEEEEC
AGDGLSSSIYIARDGEMIKIAQSTYLDSLGDFYASVTELLGFKPMRHEGKVMSLAAYGRP
CCCCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC
TYDLSNIIELNGLTFDNHLKLIGVEATRKLAELFSYPLSRAKEIAGQMKRGKLDGELQRR
CCCHHHEEEECCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AIEIAASAQAHLEKLIDELGLKLKEYGLPLAYAGGVAQNVKANAILRKLFPSLWVFPAMD
HHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCHHCHHHHHHHHHHHHHHEEEECCC
DGGLAFGAAIFVKAQLERLDSKWKPFKLEHVYLGPDYSKDEVEGFLRREGAEFEEVDDVP
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCC
GFVADSLVDRKIVAFFQGRMEFGPRALGNRSILADPRDDGVKERLNVALKRDVFQPFAPS
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHH
MLEERAREYLADLNGEPNRFMTMSYTASEEFRREAPAVVHVDGTTRPQSVVRELNPVYYD
HHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHCCCEEEEECCCCCHHHHHHHHCHHHHH
IIKAFERRTGLGAVLNTSFNMHGEPIVCSPKDALGSFRKAGLDVLVLGGFVVHQ
HHHHHHHCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHCCCCEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]