| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223714
Identifier: 212223714
GI number: 212223714
Start: 519291
End: 520895
Strand: Reverse
Name: 212223714
Synonym: TON_0566
Alternate gene names: NA
Gene position: 520895-519291 (Counterclockwise)
Preceding gene: 212223716
Following gene: 212223713
Centisome position: 28.19
GC content: 54.14
Gene sequence:
>1605_bases ATGATTTTGGGAATCCACGACGGCCACGATGCGGGAGCTGTGCTGATAGACGGCGAGAGTATCTTCGCGGTTAACGAAGA GAGGCTGAACCGGGTTAAGAAGTACCGAGGATTTCCAACTCTCAGCGTGAGGAAAGTCCTCGAGATGGCGGGTGTTTCGC CCGAGGAAGTTGAAATCATAGCCATTGCTGGCATCTTCCGGAAGCAGAAGCGGCTCTTAGAGCTTGAGAACAACCTGCAC GTCATTTTCGGGCCGGATTTCAAGAGGAAAGTTCTCTTCGTTGAGCATCACTTAGCTCACTCTGCGAGTGCCTACTACAC GAGCGGCTGGAAGGATGCTATAGCCCTGAGCATAGACGCCGCTGGAGATGGGTTGAGCTCATCAATCTATATCGCGAGAG ATGGAGAGATGATTAAAATCGCCCAGAGCACCTATCTAGACTCCCTCGGCGACTTCTACGCATCTGTTACGGAGCTCCTT GGCTTTAAGCCAATGCGCCACGAGGGCAAGGTGATGAGCCTGGCAGCATACGGAAGGCCCACCTATGATTTGAGCAATAT CATAGAGCTGAACGGTTTAACCTTCGACAACCACCTCAAACTCATAGGCGTTGAAGCTACGAGGAAGCTGGCCGAGCTAT TCAGCTATCCCTTGAGCAGGGCTAAAGAAATCGCAGGGCAGATGAAGCGCGGGAAGCTCGACGGGGAACTCCAAAGAAGG GCAATAGAGATAGCGGCCAGCGCTCAGGCACACCTCGAAAAGCTCATTGACGAGCTAGGCCTCAAGCTGAAGGAGTACGG TCTTCCGCTCGCCTACGCCGGCGGAGTTGCCCAGAACGTCAAGGCCAACGCCATTTTGAGAAAGCTCTTCCCAAGCTTGT GGGTGTTCCCGGCAATGGACGATGGAGGACTGGCTTTTGGAGCGGCAATCTTCGTCAAGGCGCAGCTTGAGAGACTTGAC AGCAAATGGAAACCATTCAAGCTTGAGCACGTCTACCTTGGGCCGGACTACTCAAAGGACGAGGTAGAGGGATTCCTGAG GAGGGAGGGTGCCGAGTTCGAGGAGGTAGACGACGTCCCGGGCTTCGTCGCCGATTCCTTAGTTGATAGAAAAATCGTCG CCTTTTTCCAGGGAAGGATGGAGTTTGGACCAAGGGCCCTGGGCAACCGCTCTATTTTAGCCGACCCAAGGGACGATGGA GTTAAGGAGAGACTCAACGTGGCCCTAAAGCGCGATGTCTTCCAGCCATTTGCTCCTTCGATGCTCGAGGAGAGAGCGAG AGAGTATCTGGCGGATCTCAACGGTGAGCCCAACAGGTTCATGACGATGAGCTACACCGCGAGCGAGGAGTTTAGAAGGG AAGCTCCAGCGGTTGTTCATGTGGATGGGACGACGAGGCCGCAGAGCGTTGTGAGGGAGCTCAACCCAGTTTACTACGAC ATCATAAAGGCCTTTGAGAGGAGAACGGGTCTTGGGGCGGTATTAAACACCAGCTTCAACATGCACGGTGAACCAATAGT CTGCTCGCCGAAGGACGCGCTGGGAAGCTTCAGAAAGGCTGGGTTGGACGTGCTGGTTCTTGGGGGATTTGTCGTCCATC AATGA
Upstream 100 bases:
>100_bases CCTCTTCATGGTTCCACCTCCTTCAAATGTATTCATTCGGCAGGGCTTTTAAATTCTTCCCTCCCCTAATGTTTAAAAAA CGAACATCGAATGCACAACC
Downstream 100 bases:
>100_bases AATTTACTATTCTTTGATGTCCATCTTTTTGCCAAGGTAAAGTTATAAACATTGGGCCGAAGAACTTTCGGTGATGTTCA TGGCGCTGAGCGACAGGTTA
Product: carbamoyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MILGIHDGHDAGAVLIDGESIFAVNEERLNRVKKYRGFPTLSVRKVLEMAGVSPEEVEIIAIAGIFRKQKRLLELENNLH VIFGPDFKRKVLFVEHHLAHSASAYYTSGWKDAIALSIDAAGDGLSSSIYIARDGEMIKIAQSTYLDSLGDFYASVTELL GFKPMRHEGKVMSLAAYGRPTYDLSNIIELNGLTFDNHLKLIGVEATRKLAELFSYPLSRAKEIAGQMKRGKLDGELQRR AIEIAASAQAHLEKLIDELGLKLKEYGLPLAYAGGVAQNVKANAILRKLFPSLWVFPAMDDGGLAFGAAIFVKAQLERLD SKWKPFKLEHVYLGPDYSKDEVEGFLRREGAEFEEVDDVPGFVADSLVDRKIVAFFQGRMEFGPRALGNRSILADPRDDG VKERLNVALKRDVFQPFAPSMLEERAREYLADLNGEPNRFMTMSYTASEEFRREAPAVVHVDGTTRPQSVVRELNPVYYD IIKAFERRTGLGAVLNTSFNMHGEPIVCSPKDALGSFRKAGLDVLVLGGFVVHQ
Sequences:
>Translated_534_residues MILGIHDGHDAGAVLIDGESIFAVNEERLNRVKKYRGFPTLSVRKVLEMAGVSPEEVEIIAIAGIFRKQKRLLELENNLH VIFGPDFKRKVLFVEHHLAHSASAYYTSGWKDAIALSIDAAGDGLSSSIYIARDGEMIKIAQSTYLDSLGDFYASVTELL GFKPMRHEGKVMSLAAYGRPTYDLSNIIELNGLTFDNHLKLIGVEATRKLAELFSYPLSRAKEIAGQMKRGKLDGELQRR AIEIAASAQAHLEKLIDELGLKLKEYGLPLAYAGGVAQNVKANAILRKLFPSLWVFPAMDDGGLAFGAAIFVKAQLERLD SKWKPFKLEHVYLGPDYSKDEVEGFLRREGAEFEEVDDVPGFVADSLVDRKIVAFFQGRMEFGPRALGNRSILADPRDDG VKERLNVALKRDVFQPFAPSMLEERAREYLADLNGEPNRFMTMSYTASEEFRREAPAVVHVDGTTRPQSVVRELNPVYYD IIKAFERRTGLGAVLNTSFNMHGEPIVCSPKDALGSFRKAGLDVLVLGGFVVHQ >Mature_534_residues MILGIHDGHDAGAVLIDGESIFAVNEERLNRVKKYRGFPTLSVRKVLEMAGVSPEEVEIIAIAGIFRKQKRLLELENNLH VIFGPDFKRKVLFVEHHLAHSASAYYTSGWKDAIALSIDAAGDGLSSSIYIARDGEMIKIAQSTYLDSLGDFYASVTELL GFKPMRHEGKVMSLAAYGRPTYDLSNIIELNGLTFDNHLKLIGVEATRKLAELFSYPLSRAKEIAGQMKRGKLDGELQRR AIEIAASAQAHLEKLIDELGLKLKEYGLPLAYAGGVAQNVKANAILRKLFPSLWVFPAMDDGGLAFGAAIFVKAQLERLD SKWKPFKLEHVYLGPDYSKDEVEGFLRREGAEFEEVDDVPGFVADSLVDRKIVAFFQGRMEFGPRALGNRSILADPRDDG VKERLNVALKRDVFQPFAPSMLEERAREYLADLNGEPNRFMTMSYTASEEFRREAPAVVHVDGTTRPQSVVRELNPVYYD IIKAFERRTGLGAVLNTSFNMHGEPIVCSPKDALGSFRKAGLDVLVLGGFVVHQ
Specific function: Unknown
COG id: COG2192
COG function: function code O; Predicted carbamoyl transferase, NodU family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NodU/CmcH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003696 [H]
Pfam domain/function: PF02543 CmcH_NodU [H]
EC number: NA
Molecular weight: Translated: 59367; Mature: 59367
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILGIHDGHDAGAVLIDGESIFAVNEERLNRVKKYRGFPTLSVRKVLEMAGVSPEEVEII CEEEEECCCCCCEEEECCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEE AIAGIFRKQKRLLELENNLHVIFGPDFKRKVLFVEHHLAHSASAYYTSGWKDAIALSIDA EEHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCEEEEEEEC AGDGLSSSIYIARDGEMIKIAQSTYLDSLGDFYASVTELLGFKPMRHEGKVMSLAAYGRP CCCCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC TYDLSNIIELNGLTFDNHLKLIGVEATRKLAELFSYPLSRAKEIAGQMKRGKLDGELQRR CCCHHHEEEECCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AIEIAASAQAHLEKLIDELGLKLKEYGLPLAYAGGVAQNVKANAILRKLFPSLWVFPAMD HHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCHHCHHHHHHHHHHHHHHEEEECCC DGGLAFGAAIFVKAQLERLDSKWKPFKLEHVYLGPDYSKDEVEGFLRREGAEFEEVDDVP CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCC GFVADSLVDRKIVAFFQGRMEFGPRALGNRSILADPRDDGVKERLNVALKRDVFQPFAPS CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHH MLEERAREYLADLNGEPNRFMTMSYTASEEFRREAPAVVHVDGTTRPQSVVRELNPVYYD HHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHCCCEEEEECCCCCHHHHHHHHCHHHHH IIKAFERRTGLGAVLNTSFNMHGEPIVCSPKDALGSFRKAGLDVLVLGGFVVHQ HHHHHHHCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHCCCCEEEECCEEECC >Mature Secondary Structure MILGIHDGHDAGAVLIDGESIFAVNEERLNRVKKYRGFPTLSVRKVLEMAGVSPEEVEII CEEEEECCCCCCEEEECCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEE AIAGIFRKQKRLLELENNLHVIFGPDFKRKVLFVEHHLAHSASAYYTSGWKDAIALSIDA EEHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCEEEEEEEC AGDGLSSSIYIARDGEMIKIAQSTYLDSLGDFYASVTELLGFKPMRHEGKVMSLAAYGRP CCCCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC TYDLSNIIELNGLTFDNHLKLIGVEATRKLAELFSYPLSRAKEIAGQMKRGKLDGELQRR CCCHHHEEEECCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AIEIAASAQAHLEKLIDELGLKLKEYGLPLAYAGGVAQNVKANAILRKLFPSLWVFPAMD HHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCHHCHHHHHHHHHHHHHHEEEECCC DGGLAFGAAIFVKAQLERLDSKWKPFKLEHVYLGPDYSKDEVEGFLRREGAEFEEVDDVP CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCC GFVADSLVDRKIVAFFQGRMEFGPRALGNRSILADPRDDGVKERLNVALKRDVFQPFAPS CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCHH MLEERAREYLADLNGEPNRFMTMSYTASEEFRREAPAVVHVDGTTRPQSVVRELNPVYYD HHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHCCCEEEEECCCCCHHHHHHHHCHHHHH IIKAFERRTGLGAVLNTSFNMHGEPIVCSPKDALGSFRKAGLDVLVLGGFVVHQ HHHHHHHCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHCCCCEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]