| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is arsR [C]
Identifier: 212223673
GI number: 212223673
Start: 481092
End: 481469
Strand: Reverse
Name: arsR [C]
Synonym: TON_0525
Alternate gene names: 212223673
Gene position: 481469-481092 (Counterclockwise)
Preceding gene: 212223674
Following gene: 212223672
Centisome position: 26.06
GC content: 49.21
Gene sequence:
>378_bases ATGAGGGTTAGGGAAGTTCTGAACGAACTAGATGAGAAGCAAAGAAGAACTGTCCTCCAGTGTTCAGAGACCTGTGGCAT CCCTGACCTAGACAAGGAGGTTAACCTTCGGGTAGAAGAGGACGTCATGAAGTTCCTCAAGGCACTCTCAAACCCGCTGA GGCTCAGGATACTCAAGATCCTAAAGGACAACTGGCTCTGCGTGTGTCTGATATCAAAGATACTCGACCAAGATCAGACT CTGATCAGCCACCACCTCCGGACGCTAAAGGCTCTGGGCCTGATACTTGAGAGAAAAGAAGGCAAGATGCACTTTTACAG AACGAACACAGAGGTTCTCGAGGAATACCTCGTAAGGGTGAGAACTGGACTGGTGTGA
Upstream 100 bases:
>100_bases ATAAAAGTGATGGGAGCCGTCTGAAGGTCGAAATCCTTGACTAACTTCATGTGAAAATTCTTAAATAGATGTGTCCCAAT CTGCTAATCGGTGTTGCAGC
Downstream 100 bases:
>100_bases GCTATATGAACGACCATCAGCGGAGAGTTGACGACCTTGTTAAAGAATTCGGTGGATACTGGAGTCCCTTCGAGATGCTC GCAGCTTTGATGGAAGAGAT
Product: transcription regulator
Products: NA
Alternate protein names: Arsenical Resistance Operon Repressor; Transcriptional Regulator; Transcription Regulator ArsR Family; Transcription Regulator ArsR; Arsr Family Transcriptional Regulator; Transcription Regulator
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MRVREVLNELDEKQRRTVLQCSETCGIPDLDKEVNLRVEEDVMKFLKALSNPLRLRILKILKDNWLCVCLISKILDQDQT LISHHLRTLKALGLILERKEGKMHFYRTNTEVLEEYLVRVRTGLV
Sequences:
>Translated_125_residues MRVREVLNELDEKQRRTVLQCSETCGIPDLDKEVNLRVEEDVMKFLKALSNPLRLRILKILKDNWLCVCLISKILDQDQT LISHHLRTLKALGLILERKEGKMHFYRTNTEVLEEYLVRVRTGLV >Mature_125_residues MRVREVLNELDEKQRRTVLQCSETCGIPDLDKEVNLRVEEDVMKFLKALSNPLRLRILKILKDNWLCVCLISKILDQDQT LISHHLRTLKALGLILERKEGKMHFYRTNTEVLEEYLVRVRTGLV
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14743; Mature: 14743
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVREVLNELDEKQRRTVLQCSETCGIPDLDKEVNLRVEEDVMKFLKALSNPLRLRILKI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEHHHHHHHHHHHCCHHHHHHHHH LKDNWLCVCLISKILDQDQTLISHHLRTLKALGLILERKEGKMHFYRTNTEVLEEYLVRV HHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH RTGLV HHCCC >Mature Secondary Structure MRVREVLNELDEKQRRTVLQCSETCGIPDLDKEVNLRVEEDVMKFLKALSNPLRLRILKI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCEEHHHHHHHHHHHCCHHHHHHHHH LKDNWLCVCLISKILDQDQTLISHHLRTLKALGLILERKEGKMHFYRTNTEVLEEYLVRV HHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH RTGLV HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA