| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212223657
Identifier: 212223657
GI number: 212223657
Start: 468326
End: 468805
Strand: Reverse
Name: 212223657
Synonym: TON_0509
Alternate gene names: NA
Gene position: 468805-468326 (Counterclockwise)
Preceding gene: 212223658
Following gene: 212223656
Centisome position: 25.37
GC content: 45.83
Gene sequence:
>480_bases ATGGTCATGAAAGACAAAAAGGCACTCGATGGCCTCATTGAGCTCCTCGACGATAGTGTGCCGGGAATTCGCGGAGATGC TCTCCTGATTCTTGGGATGATTGCCCAGCAGAGGGGTGAAGTTCTCGAATCCCACATTGATAGAATCTTTCCAAAAGCGG TGGAACTCACGAAGAATAGAAATCCCTACGTAAAGGAAAATGCAATGGTTCTGTCCTACGAACTTGTCCGTAGATTCCAG ACTAAAATAATGAAGCTTAAGGACACTATTATCAATGACCTGATAGAGGAGATTAGAGAAGGTGACAAGAACACCAAGGG CTTTGCGCTGATACTACTCGGTGAGCTCAACGCTAAAGAGACCAGGGAGTACGTTGAAGAGCTCGTAAATGTTGAGGACA AGGTTATACTCCCGTTTGAAGGGAAGAAATGGGTTCCACTCGGCCAGATAGCGATGGAAACCCTAGAAAAACTCTCTTGA
Upstream 100 bases:
>100_bases TAGCTTTAGGGTGATACCATGGGATTCTTGTCATTCGGCTCAAAAAAAAGATAAAATAAAAAAGCTCATAGAAGAAGAGC GGTTTAGTGACATCATTACA
Downstream 100 bases:
>100_bases GGTGGTCTCATGATTGAAACGCTGCTGTTTTTAGTCCTGCTGGTGGTTGCTCTTTACCTAGTTATTAAGCTGACAGTGGC CATTCTGAAGTACCTAGTTA
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MVMKDKKALDGLIELLDDSVPGIRGDALLILGMIAQQRGEVLESHIDRIFPKAVELTKNRNPYVKENAMVLSYELVRRFQ TKIMKLKDTIINDLIEEIREGDKNTKGFALILLGELNAKETREYVEELVNVEDKVILPFEGKKWVPLGQIAMETLEKLS
Sequences:
>Translated_159_residues MVMKDKKALDGLIELLDDSVPGIRGDALLILGMIAQQRGEVLESHIDRIFPKAVELTKNRNPYVKENAMVLSYELVRRFQ TKIMKLKDTIINDLIEEIREGDKNTKGFALILLGELNAKETREYVEELVNVEDKVILPFEGKKWVPLGQIAMETLEKLS >Mature_159_residues MVMKDKKALDGLIELLDDSVPGIRGDALLILGMIAQQRGEVLESHIDRIFPKAVELTKNRNPYVKENAMVLSYELVRRFQ TKIMKLKDTIINDLIEEIREGDKNTKGFALILLGELNAKETREYVEELVNVEDKVILPFEGKKWVPLGQIAMETLEKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18137; Mature: 18137
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMKDKKALDGLIELLDDSVPGIRGDALLILGMIAQQRGEVLESHIDRIFPKAVELTKNR CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NPYVKENAMVLSYELVRRFQTKIMKLKDTIINDLIEEIREGDKNTKGFALILLGELNAKE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHH TREYVEELVNVEDKVILPFEGKKWVPLGQIAMETLEKLS HHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MVMKDKKALDGLIELLDDSVPGIRGDALLILGMIAQQRGEVLESHIDRIFPKAVELTKNR CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NPYVKENAMVLSYELVRRFQTKIMKLKDTIINDLIEEIREGDKNTKGFALILLGELNAKE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHH TREYVEELVNVEDKVILPFEGKKWVPLGQIAMETLEKLS HHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA