Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

Click here to switch to the map view.

The map label for this gene is 212223646

Identifier: 212223646

GI number: 212223646

Start: 456928

End: 457428

Strand: Reverse

Name: 212223646

Synonym: TON_0499

Alternate gene names: NA

Gene position: 457428-456928 (Counterclockwise)

Preceding gene: 212223648

Following gene: 212223645

Centisome position: 24.76

GC content: 50.3

Gene sequence:

>501_bases
ATGTGGGGAAAGATTGAGCATTACTTTGATGAATATCCCGTCAGAAAGCAGATTGCCAAAACGCTTCTCAAGTATGGCCT
TCGCGTCTCTGACGACATGAAGATTAAAGCGGGCGACATAGAGGTTCCATACACCAAGATAGCCAAGGCCCTTGACGTGG
ACAGAAGGGTCGTCAAGGAGACCGTCGGCATGATACTCAAGATACCCGAGCTGAAGGAGATATACACCAACCTCGAGCCA
ACCGTTCACATGAAGTACGTCGGGAGGCATGTTGGCTACGGCGTCATTGAGATCGAGCCCGAGCCGAGGGCGATAGGAAT
ACTCGCCAAGATCGCTCAGAAGATCGCCGAGAGGGACATCAACATTATTCAGGTAGTTGCCGAGGATCCGGAGCTGTATC
CCGAAGCAACACTCACCATCATCACTGAAAAGCCGATTCCTGGAGACCTGATAAACGAACTCTCCAAGCTTGAGGGCGTC
AAGAGGATTTCAATTTATTGA

Upstream 100 bases:

>100_bases
GATTTTTAAGGGAAGACCTTTTGCCATCATGCGGGCATGGAAACATTTTAATATTATTGAATTAAACAGTCTATCGATGG
ACTACCATGGGTGATTGATC

Downstream 100 bases:

>100_bases
ACCCTCTCTTCTCCTGTAATTTGTTGATTGAAGTTTTCCTCAACTTTCTCAACTTTTAGTAAACAAATTTGAGAAGTTCA
TGACTTCTATAAAGTCATGC

Product: regulator of amino acid metabolism

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MWGKIEHYFDEYPVRKQIAKTLLKYGLRVSDDMKIKAGDIEVPYTKIAKALDVDRRVVKETVGMILKIPELKEIYTNLEP
TVHMKYVGRHVGYGVIEIEPEPRAIGILAKIAQKIAERDINIIQVVAEDPELYPEATLTIITEKPIPGDLINELSKLEGV
KRISIY

Sequences:

>Translated_166_residues
MWGKIEHYFDEYPVRKQIAKTLLKYGLRVSDDMKIKAGDIEVPYTKIAKALDVDRRVVKETVGMILKIPELKEIYTNLEP
TVHMKYVGRHVGYGVIEIEPEPRAIGILAKIAQKIAERDINIIQVVAEDPELYPEATLTIITEKPIPGDLINELSKLEGV
KRISIY
>Mature_166_residues
MWGKIEHYFDEYPVRKQIAKTLLKYGLRVSDDMKIKAGDIEVPYTKIAKALDVDRRVVKETVGMILKIPELKEIYTNLEP
TVHMKYVGRHVGYGVIEIEPEPRAIGILAKIAQKIAERDINIIQVVAEDPELYPEATLTIITEKPIPGDLINELSKLEGV
KRISIY

Specific function: Unknown

COG id: COG2150

COG function: function code R; Predicted regulator of amino acid metabolism, contains ACT domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18927; Mature: 18927

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGKIEHYFDEYPVRKQIAKTLLKYGLRVSDDMKIKAGDIEVPYTKIAKALDVDRRVVKE
CCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
TVGMILKIPELKEIYTNLEPTVHMKYVGRHVGYGVIEIEPEPRAIGILAKIAQKIAERDI
HHHHHCCCCCHHHHHCCCCCEEEHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCC
NIIQVVAEDPELYPEATLTIITEKPIPGDLINELSKLEGVKRISIY
EEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure
MWGKIEHYFDEYPVRKQIAKTLLKYGLRVSDDMKIKAGDIEVPYTKIAKALDVDRRVVKE
CCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
TVGMILKIPELKEIYTNLEPTVHMKYVGRHVGYGVIEIEPEPRAIGILAKIAQKIAERDI
HHHHHCCCCCHHHHHCCCCCEEEHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCC
NIIQVVAEDPELYPEATLTIITEKPIPGDLINELSKLEGVKRISIY
EEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA