Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223624

Identifier: 212223624

GI number: 212223624

Start: 439542

End: 439796

Strand: Reverse

Name: 212223624

Synonym: TON_0477

Alternate gene names: NA

Gene position: 439796-439542 (Counterclockwise)

Preceding gene: 212223625

Following gene: 212223622

Centisome position: 23.8

GC content: 46.67

Gene sequence:

>255_bases
ATGGAAGTTAAAGAGTGCGACGATAACTTGGATGAGATAATAGAAGACACCAACGTGGCCAAGCTCCTCAGGGCATATCC
TCAATCCCTTGAGATACTCGTCAAGTATGGCTTCTCTCCGCTCCAGAACCCGGCAATGAGGAAAACCTTAGCCCGGACGG
TGACCCTTAGGCAAGCCAAAAAGCTTCTCGGTATGAGCGACGAGAAATTCGAGAAGATGATGGAAGAACTTAAAAAACTG
GAGAAGAGAGATTAA

Upstream 100 bases:

>100_bases
TTCCCAAGTTAGAGAAGGCAGGATACAACATTGAAGTTAGAGAAGTCGGCGGTTTCTTCGTCCTCAAAGTTACGAAGACC
GAAAGCTCAAAGGAATTTAA

Downstream 100 bases:

>100_bases
TCGAGCTCTTCTACCAGAGCCGCCCCTTCTTCAATCTTTATCCCTCTGTTGAGCATATCCTTTAGATCCTTTTCTGGGTC
TCCGATAAGCCTAAGGTCAA

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MEVKECDDNLDEIIEDTNVAKLLRAYPQSLEILVKYGFSPLQNPAMRKTLARTVTLRQAKKLLGMSDEKFEKMMEELKKL
EKRD

Sequences:

>Translated_84_residues
MEVKECDDNLDEIIEDTNVAKLLRAYPQSLEILVKYGFSPLQNPAMRKTLARTVTLRQAKKLLGMSDEKFEKMMEELKKL
EKRD
>Mature_84_residues
MEVKECDDNLDEIIEDTNVAKLLRAYPQSLEILVKYGFSPLQNPAMRKTLARTVTLRQAKKLLGMSDEKFEKMMEELKKL
EKRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9818; Mature: 9818

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVKECDDNLDEIIEDTNVAKLLRAYPQSLEILVKYGFSPLQNPAMRKTLARTVTLRQAK
CCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KLLGMSDEKFEKMMEELKKLEKRD
HHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEVKECDDNLDEIIEDTNVAKLLRAYPQSLEILVKYGFSPLQNPAMRKTLARTVTLRQAK
CCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
KLLGMSDEKFEKMMEELKKLEKRD
HHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA