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The map label for this gene is pfdB

Identifier: 212223597

GI number: 212223597

Start: 422351

End: 422701

Strand: Reverse

Name: pfdB

Synonym: TON_0451

Alternate gene names: 212223597

Gene position: 422701-422351 (Counterclockwise)

Preceding gene: 212223598

Following gene: 212223596

Centisome position: 22.88

GC content: 56.7

Gene sequence:

>351_bases
GTGCAGAACATCCCGCCGCAGGTTCAGGCTATGTTGGGACAGCTTGAGGGCTACCAGCAGCAGCTCCAGCTCGTCATCCA
GCAGAAGCAAAAGGTCCAGCTCGAGCTCACCGAGGCAAAGAAGGCTCTGGAGGAAATCGAGAAGGTTGAGGAGGGAACCG
TCATCTACAAGACCGTTGGGACGCTCATCGTTAAGACCGACAAGGCCAAGGCTCTCGAGGAGCTGAAGGAGAAAGTCGAG
ACCCTCGAAGTTAGGCTCAACGCCCTCGAGAGGCAGGAGAAGAAGCTCAACGAAAAGCTCAAGGAGCTCACCCAGAAGAT
ACAGACTGCTCTAAGGCCGACCGCCGGCTGA

Upstream 100 bases:

>100_bases
CTGGATTAAGGTCGCGATGGATTCTCTAGAAGTTTAGCCTAAACTATTTAAAGCCCCGTCCTTATTCTAACCTGACATTA
CGATTACGGAGGTGTTTGTC

Downstream 100 bases:

>100_bases
TCTCTTCTCTTTCCTTTGGGGTGGTAGCGATGGACAAGGGAAGCAGCGGAAAGAGGGTTATCCATATAGGTCTTCCAGAG
CTGAGCGAAGAGCAGCTCAT

Product: prefoldin subunit beta

Products: NA

Alternate protein names: GimC subunit beta

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MQNIPPQVQAMLGQLEGYQQQLQLVIQQKQKVQLELTEAKKALEEIEKVEEGTVIYKTVGTLIVKTDKAKALEELKEKVE
TLEVRLNALERQEKKLNEKLKELTQKIQTALRPTAG

Sequences:

>Translated_116_residues
MQNIPPQVQAMLGQLEGYQQQLQLVIQQKQKVQLELTEAKKALEEIEKVEEGTVIYKTVGTLIVKTDKAKALEELKEKVE
TLEVRLNALERQEKKLNEKLKELTQKIQTALRPTAG
>Mature_116_residues
MQNIPPQVQAMLGQLEGYQQQLQLVIQQKQKVQLELTEAKKALEEIEKVEEGTVIYKTVGTLIVKTDKAKALEELKEKVE
TLEVRLNALERQEKKLNEKLKELTQKIQTALRPTAG

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding

COG id: COG1382

COG function: function code O; Prefoldin, chaperonin cofactor

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit beta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PFDB_THEON (B6YTZ4)

Other databases:

- EMBL:   CP000855
- RefSeq:   YP_002306833.1
- GeneID:   7016746
- GenomeReviews:   CP000855_GR
- KEGG:   ton:TON_0451
- HOGENOM:   HBG726985
- OMA:   ELPPQIQ
- ProtClustDB:   PRK09343
- HAMAP:   MF_00307
- InterPro:   IPR012713
- InterPro:   IPR002777
- InterPro:   IPR009053
- TIGRFAMs:   TIGR02338

Pfam domain/function: PF01920 Prefoldin_2; SSF46579 Prefoldin

EC number: NA

Molecular weight: Translated: 13251; Mature: 13251

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNIPPQVQAMLGQLEGYQQQLQLVIQQKQKVQLELTEAKKALEEIEKVEEGTVIYKTVG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
TLIVKTDKAKALEELKEKVETLEVRLNALERQEKKLNEKLKELTQKIQTALRPTAG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQNIPPQVQAMLGQLEGYQQQLQLVIQQKQKVQLELTEAKKALEEIEKVEEGTVIYKTVG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
TLIVKTDKAKALEELKEKVETLEVRLNALERQEKKLNEKLKELTQKIQTALRPTAG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA