| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is pheT [C]
Identifier: 212223592
GI number: 212223592
Start: 418875
End: 419600
Strand: Reverse
Name: pheT [C]
Synonym: TON_0446
Alternate gene names: 212223592
Gene position: 419600-418875 (Counterclockwise)
Preceding gene: 212223593
Following gene: 212223591
Centisome position: 22.71
GC content: 56.61
Gene sequence:
>726_bases ATGTGGGACACGAGCAAGGACTACCGCTTACTGGTGGCGGAGAAGAGCGTGGAGCTGTTCCTGAAGACGATTGAGGGAGC AAAGTTCAAGGGCAAGTGGGACAAGAAGAAGGCCATCCAGCTTGCCAAGGAGATGATCCCCGAGATACAGGCCATGCGCT ACTCCTATATCGAGCCGAAGGAACTCATAGAGACTCCGCAGATGCAGGCTCTGAAGGAGAAGGCCAACGGCATAATCGAG GCTCTTGGTGGAGACGACTGGCATCACAAGTTCCTCAGCCTGGCCGACAAGAGCGAGCGCGAGAAGGTTGAGGAGGCTGT GGCAAAAATCAGGTTTTTCCTCAACACTATCCTCAACCTTGACAAGCGCCTAGCATTAGGTAAGATAAACGATCCGGTCA TAGCGGTGGACATAAGGGTCGGCGAGGTCATGAGCGTCGGGAAGCACCCCAACGCGGACAGGCTTTTGGTTACGAACGTC AACATCGGCGAGAGGGCAATAACTGTGGTCACCAACGACCTCACCGTTAAGGAGGGTAACCGCGTTGCCGTTGCCCTGCT CCCGCCGGCGAACTTCCGCGGAATAGTCAGCGAGGGGATGTTCCTCGGCGCCGGTGAAGGCGTCCTCAAGGACGTCAAGG GAGAGATCGGCGGCCTGCCGAAGGGAATCCCGCTCGAGGCATTCAACGAGACGAGGAACCTTGTAGAGGCGTTTTTGAAG GGGTGA
Upstream 100 bases:
>100_bases GCACGCTGGGGAGACAAAGCGAAGGCCCGTTCTATAGCTGAGGGAATAAGGGACGAAAGCGTTAAGAACCGCGTTCTGAA AGCTCTGGAGGGTGAAGAAG
Downstream 100 bases:
>100_bases AATATTATCCCCCAGACTAGAATTTTGAGGTATTCTTTTTTCTTCTAAGGTTTCTGTGACATTTCTGGTGTATTCCACCT CTTTCACATTTTACATTTAT
Product: putative tRNA-binding protein
Products: AMP; diphosphate; L-phenylalanyl-tRNAPhe [C]
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MWDTSKDYRLLVAEKSVELFLKTIEGAKFKGKWDKKKAIQLAKEMIPEIQAMRYSYIEPKELIETPQMQALKEKANGIIE ALGGDDWHHKFLSLADKSEREKVEEAVAKIRFFLNTILNLDKRLALGKINDPVIAVDIRVGEVMSVGKHPNADRLLVTNV NIGERAITVVTNDLTVKEGNRVAVALLPPANFRGIVSEGMFLGAGEGVLKDVKGEIGGLPKGIPLEAFNETRNLVEAFLK G
Sequences:
>Translated_241_residues MWDTSKDYRLLVAEKSVELFLKTIEGAKFKGKWDKKKAIQLAKEMIPEIQAMRYSYIEPKELIETPQMQALKEKANGIIE ALGGDDWHHKFLSLADKSEREKVEEAVAKIRFFLNTILNLDKRLALGKINDPVIAVDIRVGEVMSVGKHPNADRLLVTNV NIGERAITVVTNDLTVKEGNRVAVALLPPANFRGIVSEGMFLGAGEGVLKDVKGEIGGLPKGIPLEAFNETRNLVEAFLK G >Mature_241_residues MWDTSKDYRLLVAEKSVELFLKTIEGAKFKGKWDKKKAIQLAKEMIPEIQAMRYSYIEPKELIETPQMQALKEKANGIIE ALGGDDWHHKFLSLADKSEREKVEEAVAKIRFFLNTILNLDKRLALGKINDPVIAVDIRVGEVMSVGKHPNADRLLVTNV NIGERAITVVTNDLTVKEGNRVAVALLPPANFRGIVSEGMFLGAGEGVLKDVKGEIGGLPKGIPLEAFNETRNLVEAFLK G
Specific function: Unknown
COG id: COG2517
COG function: function code R; Predicted RNA-binding protein containing a C-terminal EMAP domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.1.1.20 [C]
Molecular weight: Translated: 26734; Mature: 26734
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWDTSKDYRLLVAEKSVELFLKTIEGAKFKGKWDKKKAIQLAKEMIPEIQAMRYSYIEPK CCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH ELIETPQMQALKEKANGIIEALGGDDWHHKFLSLADKSEREKVEEAVAKIRFFLNTILNL HHHCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH DKRLALGKINDPVIAVDIRVGEVMSVGKHPNADRLLVTNVNIGERAITVVTNDLTVKEGN HHHHHCCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCEEEECCC RVAVALLPPANFRGIVSEGMFLGAGEGVLKDVKGEIGGLPKGIPLEAFNETRNLVEAFLK EEEEEEECCCCCCHHHHCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC G C >Mature Secondary Structure MWDTSKDYRLLVAEKSVELFLKTIEGAKFKGKWDKKKAIQLAKEMIPEIQAMRYSYIEPK CCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH ELIETPQMQALKEKANGIIEALGGDDWHHKFLSLADKSEREKVEEAVAKIRFFLNTILNL HHHCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH DKRLALGKINDPVIAVDIRVGEVMSVGKHPNADRLLVTNVNIGERAITVVTNDLTVKEGN HHHHHCCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCEEEECCC RVAVALLPPANFRGIVSEGMFLGAGEGVLKDVKGEIGGLPKGIPLEAFNETRNLVEAFLK EEEEEEECCCCCCHHHHCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Mg2+; Zn2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.125 {2'-deoxyadenosine} 0.009 {ATP}} 0.2 {2-chloroadenosine} 0.11 {2-chloroadenosine} [C]
Substrates: ATP; @PHEN01.txt*phenylalanine!; tRNAPhe [C]
Specific reaction: ATP + @PHEN01.txt*phenylalanine! + tRNAPhe = AMP + diphosphate + L-phenylalanyl-tRNAPhe [C]
General reaction: Aminoacylation; Esterification [C]
Inhibitor: 3'-Deoxyadenosine 5'-triphosphate; 3'-Methyl adenosine 5'-triphosphate; Zn2+ [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA