| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223573
Identifier: 212223573
GI number: 212223573
Start: 399163
End: 400542
Strand: Reverse
Name: 212223573
Synonym: TON_0427
Alternate gene names: NA
Gene position: 400542-399163 (Counterclockwise)
Preceding gene: 212223574
Following gene: 212223572
Centisome position: 21.68
GC content: 50.22
Gene sequence:
>1380_bases ATGAGGAAAATAAGCGTCCTTATGGCGTTCTTAATAACGGGCTACATTCTTGGGATATGGAACTTCCTTGTTTTGCCTAA ATACTACATAACCTTCGGACTGAAGGGCTTTCTGATCTCGCTGATTCCAATGCTGATAGCGCTGTTCCTAATCTACAGTG AAGCTGAGAGCACCAAGCGGACGAGGTACCTCATCTACGAACTGTTCTTTAAGATAGCAAGAACCCCGGCGCTGATCTTC ACACTGGTGATGTTTCTTCTGATAATGCTCGGCATAACTACTTACTACTCCGCCTACAGCCTCGTGTACATCTTTGGAAT CGGAGCGAAATACGTCCCAGTTATTGCAGTTGGCACAATCATACTCTCCGTAATTCTTCTCCTGATGGCGAAGGGCAAAA CCTTGGAGTTCATCTCTGTTGTATCTATCCTATTCGTGCTATTCGCCATAGTCTCGGCAATCCTCGTTAGGAACCAAGCC CTCAGCACCGTTACAGCCCCACAGGCCGTCCAGTATATGAAGATGGCAGTGTCATCGATAACTTCATTTGACCAGTCCCT GACATTCAGAGGAGTCCTCTACATGCTCGTTTCCGTGCTTGTTTCCTTTGGCATTGGTGCTGGAGTCTACTACGTGATAG GAAGTTTCACTCCTGAAGAGCTTGACCTCAAGAAGGTTCTTGGCATAGTGTTCATACTTCAGATAATCCTCAGCTTCGCG GCCGCATTTACCGTCGCCTACTCCCTCGGTGCGGCCTATCAGGGATTTGGAAAGGCTTTCCAGAACCCAAACATCCCCGC GGAAGAGTCTATGAACCTTTATCTCAAGTTCCAGGATCTTAAAGAGTATGTCATCAACAGCGAGAAGAGCCCGATGGATT CCATTGAGGTCTTCTACTCCATTCCGGAGGTTCTCAGGGGCAACATAGCCCACGCCGACAGGTTAATCTATCTCCTCATG CTCTCGCTGTACTTCGCTGGCCTGACTACGATAATAGTCCTCATTGAGATGGGCAGTCAGATACTCTCTGAGGTCATGCA GTTGGACAGGAGCAAAAGCCTCACGTTTGTAGCCGTCCTCGGCATGATACTAGCCGGCGTCATGGTAGTGGGGGACATCA GGACGATGTTCCTCGTTGTGCCATTCAGCGTCGGGGCGCTCATAGCTGCAGTAGAGGCTTACCCGCTCCTCGCATCGGAG CTGACCCGCAACAACGGAATAGTGGCTGCAGTTATAGGAGTGCTCTTCCTCGCCGGCCTTATGACCCTTTACTACGCCAT CAGAGCACCAGCCATCACCGTGAAGATAGGTGCACTTCTCGGCCTCGTCCTCTTCGTTCCGGTGTTTATGAACACCACGC TGCTGAAGAGCAGGCGCTGA
Upstream 100 bases:
>100_bases AAGGGTAGAAGGGCTACATAATGTTTTTATATTTTGCCGATGTTTAATTCTTTTAGGCCTCTTGAAACAACTCCAACTAT CTCCTCGGGGGTGTAATTCG
Downstream 100 bases:
>100_bases GGTCTTTTCCTTTATTCAAAAATTTTTTAAAGACCCTTCCCAATCCCCCTTAGAACGCTTATGGGGGTCTGAAAAATGGG AGACAAGACCAAGGTTCAGG
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MRKISVLMAFLITGYILGIWNFLVLPKYYITFGLKGFLISLIPMLIALFLIYSEAESTKRTRYLIYELFFKIARTPALIF TLVMFLLIMLGITTYYSAYSLVYIFGIGAKYVPVIAVGTIILSVILLLMAKGKTLEFISVVSILFVLFAIVSAILVRNQA LSTVTAPQAVQYMKMAVSSITSFDQSLTFRGVLYMLVSVLVSFGIGAGVYYVIGSFTPEELDLKKVLGIVFILQIILSFA AAFTVAYSLGAAYQGFGKAFQNPNIPAEESMNLYLKFQDLKEYVINSEKSPMDSIEVFYSIPEVLRGNIAHADRLIYLLM LSLYFAGLTTIIVLIEMGSQILSEVMQLDRSKSLTFVAVLGMILAGVMVVGDIRTMFLVVPFSVGALIAAVEAYPLLASE LTRNNGIVAAVIGVLFLAGLMTLYYAIRAPAITVKIGALLGLVLFVPVFMNTTLLKSRR
Sequences:
>Translated_459_residues MRKISVLMAFLITGYILGIWNFLVLPKYYITFGLKGFLISLIPMLIALFLIYSEAESTKRTRYLIYELFFKIARTPALIF TLVMFLLIMLGITTYYSAYSLVYIFGIGAKYVPVIAVGTIILSVILLLMAKGKTLEFISVVSILFVLFAIVSAILVRNQA LSTVTAPQAVQYMKMAVSSITSFDQSLTFRGVLYMLVSVLVSFGIGAGVYYVIGSFTPEELDLKKVLGIVFILQIILSFA AAFTVAYSLGAAYQGFGKAFQNPNIPAEESMNLYLKFQDLKEYVINSEKSPMDSIEVFYSIPEVLRGNIAHADRLIYLLM LSLYFAGLTTIIVLIEMGSQILSEVMQLDRSKSLTFVAVLGMILAGVMVVGDIRTMFLVVPFSVGALIAAVEAYPLLASE LTRNNGIVAAVIGVLFLAGLMTLYYAIRAPAITVKIGALLGLVLFVPVFMNTTLLKSRR >Mature_459_residues MRKISVLMAFLITGYILGIWNFLVLPKYYITFGLKGFLISLIPMLIALFLIYSEAESTKRTRYLIYELFFKIARTPALIF TLVMFLLIMLGITTYYSAYSLVYIFGIGAKYVPVIAVGTIILSVILLLMAKGKTLEFISVVSILFVLFAIVSAILVRNQA LSTVTAPQAVQYMKMAVSSITSFDQSLTFRGVLYMLVSVLVSFGIGAGVYYVIGSFTPEELDLKKVLGIVFILQIILSFA AAFTVAYSLGAAYQGFGKAFQNPNIPAEESMNLYLKFQDLKEYVINSEKSPMDSIEVFYSIPEVLRGNIAHADRLIYLLM LSLYFAGLTTIIVLIEMGSQILSEVMQLDRSKSLTFVAVLGMILAGVMVVGDIRTMFLVVPFSVGALIAAVEAYPLLASE LTRNNGIVAAVIGVLFLAGLMTLYYAIRAPAITVKIGALLGLVLFVPVFMNTTLLKSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50564; Mature: 50564
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS50267 NA_NEUROTRAN_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKISVLMAFLITGYILGIWNFLVLPKYYITFGLKGFLISLIPMLIALFLIYSEAESTKR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRYLIYELFFKIARTPALIFTLVMFLLIMLGITTYYSAYSLVYIFGIGAKYVPVIAVGTI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ILSVILLLMAKGKTLEFISVVSILFVLFAIVSAILVRNQALSTVTAPQAVQYMKMAVSSI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH TSFDQSLTFRGVLYMLVSVLVSFGIGAGVYYVIGSFTPEELDLKKVLGIVFILQIILSFA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH AAFTVAYSLGAAYQGFGKAFQNPNIPAEESMNLYLKFQDLKEYVINSEKSPMDSIEVFYS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHH IPEVLRGNIAHADRLIYLLMLSLYFAGLTTIIVLIEMGSQILSEVMQLDRSKSLTFVAVL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GMILAGVMVVGDIRTMFLVVPFSVGALIAAVEAYPLLASELTRNNGIVAAVIGVLFLAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MTLYYAIRAPAITVKIGALLGLVLFVPVFMNTTLLKSRR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKISVLMAFLITGYILGIWNFLVLPKYYITFGLKGFLISLIPMLIALFLIYSEAESTKR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRYLIYELFFKIARTPALIFTLVMFLLIMLGITTYYSAYSLVYIFGIGAKYVPVIAVGTI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ILSVILLLMAKGKTLEFISVVSILFVLFAIVSAILVRNQALSTVTAPQAVQYMKMAVSSI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH TSFDQSLTFRGVLYMLVSVLVSFGIGAGVYYVIGSFTPEELDLKKVLGIVFILQIILSFA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH AAFTVAYSLGAAYQGFGKAFQNPNIPAEESMNLYLKFQDLKEYVINSEKSPMDSIEVFYS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHH IPEVLRGNIAHADRLIYLLMLSLYFAGLTTIIVLIEMGSQILSEVMQLDRSKSLTFVAVL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GMILAGVMVVGDIRTMFLVVPFSVGALIAAVEAYPLLASELTRNNGIVAAVIGVLFLAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MTLYYAIRAPAITVKIGALLGLVLFVPVFMNTTLLKSRR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA