| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223563
Identifier: 212223563
GI number: 212223563
Start: 388859
End: 390082
Strand: Reverse
Name: 212223563
Synonym: TON_0417
Alternate gene names: NA
Gene position: 390082-388859 (Counterclockwise)
Preceding gene: 212223564
Following gene: 212223562
Centisome position: 21.11
GC content: 51.39
Gene sequence:
>1224_bases ATGGAAAGCCTTAAAATCGCAATAGCCTCCGACTGGTTTTTTCCCAAAATCGGTGGAATCGAGACCCACATGGATGAGCT CGCCCGTAATCTTCTCAAGGCAGGGCATGAGCCCTACGTCATCACCCATGACTACCGCCATCTAAGACCTTACGGAGATG ACTTTCCATATCCTGTCAGGAGATTTCCAGCGTCTATTTACGTGAAAAGTCATCACATCAGCGTGGGTCTCGGCCAGCTG TGGAAGATAAACGAGTTCTATAAAGAGGTTGGCTTCGATATAACTCACGTCCACAGCATCTACTCACCATTTTCGATAGC CGTCGCTAACCTATCCAGGGGTATCAGAGGAGTTCCAGTCGTTGCCACGAACCACTCCTTCTACGGGAATCCCCGGATCG GCCCGATTCTGGGCCCTATGCTAAGATATCACCTAAGGAGGATCGATTCCTTCATCGCCGTAAGCACCCCTGTGGCCAAT GACACGAAGCATCTGCTCGAAAATAAGCTGAACGGCAGGCCAGTGGTCGTCGTTCCAAACGGTATCGATGTCGAAAAATG GAGGCCTCCTGAGCCAGAGGAGAGAGAGAAGGCCAGAAAAGCCCTTGGACTTTCCGATGAGATAGTCCTCTTTTACATAG GCAGGATGACGGAGAGAAAACAGGCTCACAGGCTGCCCTTCGTCATCTCCTCAGCCATCAAGCTTTCGGGGATCGACAAG AGGATGATACGGCTGATAGCGGTCGGAAACGGTGTTATGAGACCCAAACTCGAAGAAAATCTCAAGGTAACTGGACTGGC CGAACGCACAACACTCTTCGACTTCATGCCTAGAGAGAAGGTGATGGAATTCTACTGGGCGGCAGATATAGTGCTTATGC CTGGAATGCTTGAAGCGTTCCCGATGGTGGGCCTCGAGGCCTCGGCGACAGGGAGAACAATAGTTGGCAGGAACGAGAGC GGGTTGTCGGACCTTATAGTGGACGGCGTCACAGGATTCCTTGGAAACAGTGAGGAAGAGCTTAGCCGGAAGCTTGCGCA GGTTCTCACGAACGAGGACCTCATAGAAAGAATGGGGACAGAGGCCAGGAGACGTGCGGAAAAGGAGTTTTCCTGGGATA TCATACTTAAAAAGCTCCTGAGGGTTTACAGACTCACGATGGAGAGTGCCGATGGAACGGACAAAAGATACCTGCTGTAC AAACTCATCAGGAGGAGCAGCTGA
Upstream 100 bases:
>100_bases GCTTCGCAGTTTCTATAACTCTACTGGAGCGCTTCGTCTCCTACGTGCTCAGCAGCCTCGTGGGATTCATTGTACTGCTA ACGTCCGGAGGGCGGGAGGT
Downstream 100 bases:
>100_bases TGCTGGTTTCGATAACCTTTGACGTTGAGCACGACTGTCCGCCGTACCTAACGACAACGAGAGGAATGAGGGAAGGCCTG CCAAAGCTCCTGGACCTCAT
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MESLKIAIASDWFFPKIGGIETHMDELARNLLKAGHEPYVITHDYRHLRPYGDDFPYPVRRFPASIYVKSHHISVGLGQL WKINEFYKEVGFDITHVHSIYSPFSIAVANLSRGIRGVPVVATNHSFYGNPRIGPILGPMLRYHLRRIDSFIAVSTPVAN DTKHLLENKLNGRPVVVVPNGIDVEKWRPPEPEEREKARKALGLSDEIVLFYIGRMTERKQAHRLPFVISSAIKLSGIDK RMIRLIAVGNGVMRPKLEENLKVTGLAERTTLFDFMPREKVMEFYWAADIVLMPGMLEAFPMVGLEASATGRTIVGRNES GLSDLIVDGVTGFLGNSEEELSRKLAQVLTNEDLIERMGTEARRRAEKEFSWDIILKKLLRVYRLTMESADGTDKRYLLY KLIRRSS
Sequences:
>Translated_407_residues MESLKIAIASDWFFPKIGGIETHMDELARNLLKAGHEPYVITHDYRHLRPYGDDFPYPVRRFPASIYVKSHHISVGLGQL WKINEFYKEVGFDITHVHSIYSPFSIAVANLSRGIRGVPVVATNHSFYGNPRIGPILGPMLRYHLRRIDSFIAVSTPVAN DTKHLLENKLNGRPVVVVPNGIDVEKWRPPEPEEREKARKALGLSDEIVLFYIGRMTERKQAHRLPFVISSAIKLSGIDK RMIRLIAVGNGVMRPKLEENLKVTGLAERTTLFDFMPREKVMEFYWAADIVLMPGMLEAFPMVGLEASATGRTIVGRNES GLSDLIVDGVTGFLGNSEEELSRKLAQVLTNEDLIERMGTEARRRAEKEFSWDIILKKLLRVYRLTMESADGTDKRYLLY KLIRRSS >Mature_407_residues MESLKIAIASDWFFPKIGGIETHMDELARNLLKAGHEPYVITHDYRHLRPYGDDFPYPVRRFPASIYVKSHHISVGLGQL WKINEFYKEVGFDITHVHSIYSPFSIAVANLSRGIRGVPVVATNHSFYGNPRIGPILGPMLRYHLRRIDSFIAVSTPVAN DTKHLLENKLNGRPVVVVPNGIDVEKWRPPEPEEREKARKALGLSDEIVLFYIGRMTERKQAHRLPFVISSAIKLSGIDK RMIRLIAVGNGVMRPKLEENLKVTGLAERTTLFDFMPREKVMEFYWAADIVLMPGMLEAFPMVGLEASATGRTIVGRNES GLSDLIVDGVTGFLGNSEEELSRKLAQVLTNEDLIERMGTEARRRAEKEFSWDIILKKLLRVYRLTMESADGTDKRYLLY KLIRRSS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Homo sapiens, GI11863130, Length=398, Percent_Identity=23.3668341708543, Blast_Score=86, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17532709, Length=395, Percent_Identity=25.0632911392405, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI9755344, Length=407, Percent_Identity=23.3415233415233, Blast_Score=103, Evalue=5e-23, Organism=Drosophila melanogaster, GI24654571, Length=330, Percent_Identity=24.8484848484848, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 46315; Mature: 46315
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESLKIAIASDWFFPKIGGIETHMDELARNLLKAGHEPYVITHDYRHLRPYGDDFPYPVR CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCCCHH RFPASIYVKSHHISVGLGQLWKINEFYKEVGFDITHVHSIYSPFSIAVANLSRGIRGVPV HCCCEEEEEECEEEECHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCCCEE VATNHSFYGNPRIGPILGPMLRYHLRRIDSFIAVSTPVANDTKHLLENKLNGRPVVVVPN EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEECC GIDVEKWRPPEPEEREKARKALGLSDEIVLFYIGRMTERKQAHRLPFVISSAIKLSGIDK CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHCCCHH RMIRLIAVGNGVMRPKLEENLKVTGLAERTTLFDFMPREKVMEFYWAADIVLMPGMLEAF HHHHHHHHCCCCCCCCHHCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHH PMVGLEASATGRTIVGRNESGLSDLIVDGVTGFLGNSEEELSRKLAQVLTNEDLIERMGT CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCH EARRRAEKEFSWDIILKKLLRVYRLTMESADGTDKRYLLYKLIRRSS HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MESLKIAIASDWFFPKIGGIETHMDELARNLLKAGHEPYVITHDYRHLRPYGDDFPYPVR CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCCCHH RFPASIYVKSHHISVGLGQLWKINEFYKEVGFDITHVHSIYSPFSIAVANLSRGIRGVPV HCCCEEEEEECEEEECHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCCCEE VATNHSFYGNPRIGPILGPMLRYHLRRIDSFIAVSTPVANDTKHLLENKLNGRPVVVVPN EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEECC GIDVEKWRPPEPEEREKARKALGLSDEIVLFYIGRMTERKQAHRLPFVISSAIKLSGIDK CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHCCCHH RMIRLIAVGNGVMRPKLEENLKVTGLAERTTLFDFMPREKVMEFYWAADIVLMPGMLEAF HHHHHHHHCCCCCCCCHHCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHH PMVGLEASATGRTIVGRNESGLSDLIVDGVTGFLGNSEEELSRKLAQVLTNEDLIERMGT CCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCH EARRRAEKEFSWDIILKKLLRVYRLTMESADGTDKRYLLYKLIRRSS HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]