| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223556
Identifier: 212223556
GI number: 212223556
Start: 380974
End: 381528
Strand: Reverse
Name: 212223556
Synonym: TON_0410
Alternate gene names: NA
Gene position: 381528-380974 (Counterclockwise)
Preceding gene: 212223558
Following gene: 212223550
Centisome position: 20.65
GC content: 43.78
Gene sequence:
>555_bases ATGACCACCCCCATTTACAAAACAAAAGAAAGAGAGAGAATCAAGTTTAAAAAAATTCTCGAAGCACTTTCCCAGCTCGA TACCAAGGAGCTTATAGCTCATTGGATAGATCAAGAAGTGAAGGAAGCTGAAATGTACTACAGACTCTACACAATGAGTA AGGAGGTCAACTGGGATGAGCAGATTCCAAAGCTTTTCTTCAGTATATATAAAGACTGCTTGGAACACGCCGAAGCACTG CTAAAGCTGTACCGTACTATGTATCCAGGCGAGGAAGTTATTAAGGTTAATGTCCCCGCCCTAGAGGTAGAGCTGTCCGA AGATCGCCTCAGAGAGCTGGTGTTTAAGGGAAACCTCCGGGGCATTCTCGAATACCTGATGGGTACAGAGAAAATTGCAC ACGATGTTTATTCATATCTGGCAGAACAAACTACCGACGAAAAAGTAAGGGCGACTCTCATCTGGCTGGCGGAGATTGAA AATGGACATTACGAAAAGTTGAGGAGGCTCTATGTGACACTCTTTGGAGATTATCCGGAAGAGGAAGAAGAATGA
Upstream 100 bases:
>100_bases CTATCATGGTGGATGAGTCTATTGTGCCTCTTAAAAATCAATCGATATCAAATCGAAAAGTATAAACGGTTTGCTTTCCA ATGTATATTTGGAGATGATC
Downstream 100 bases:
>100_bases GATAATTCCGTACCTTCTTTACCCTTAATTTCACTAGATGATGTTGTTAACCTTTAGGTATGCTTCTATTTCCTTAACCT CCTCAGGGGAGAGCTGAAAG
Product: rubrerythrin-related protein
Products: NA
Alternate protein names: Rubrerythrin-Like Protein; Rubrerythrin Subfamily
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTTPIYKTKERERIKFKKILEALSQLDTKELIAHWIDQEVKEAEMYYRLYTMSKEVNWDEQIPKLFFSIYKDCLEHAEAL LKLYRTMYPGEEVIKVNVPALEVELSEDRLRELVFKGNLRGILEYLMGTEKIAHDVYSYLAEQTTDEKVRATLIWLAEIE NGHYEKLRRLYVTLFGDYPEEEEE
Sequences:
>Translated_184_residues MTTPIYKTKERERIKFKKILEALSQLDTKELIAHWIDQEVKEAEMYYRLYTMSKEVNWDEQIPKLFFSIYKDCLEHAEAL LKLYRTMYPGEEVIKVNVPALEVELSEDRLRELVFKGNLRGILEYLMGTEKIAHDVYSYLAEQTTDEKVRATLIWLAEIE NGHYEKLRRLYVTLFGDYPEEEEE >Mature_183_residues TTPIYKTKERERIKFKKILEALSQLDTKELIAHWIDQEVKEAEMYYRLYTMSKEVNWDEQIPKLFFSIYKDCLEHAEALL KLYRTMYPGEEVIKVNVPALEVELSEDRLRELVFKGNLRGILEYLMGTEKIAHDVYSYLAEQTTDEKVRATLIWLAEIEN GHYEKLRRLYVTLFGDYPEEEEE
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22027; Mature: 21895
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPIYKTKERERIKFKKILEALSQLDTKELIAHWIDQEVKEAEMYYRLYTMSKEVNWDE CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QIPKLFFSIYKDCLEHAEALLKLYRTMYPGEEVIKVNVPALEVELSEDRLRELVFKGNLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECHHHHHHHHHHCCHH GILEYLMGTEKIAHDVYSYLAEQTTDEKVRATLIWLAEIENGHYEKLRRLYVTLFGDYPE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC EEEE CCCC >Mature Secondary Structure TTPIYKTKERERIKFKKILEALSQLDTKELIAHWIDQEVKEAEMYYRLYTMSKEVNWDE CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QIPKLFFSIYKDCLEHAEALLKLYRTMYPGEEVIKVNVPALEVELSEDRLRELVFKGNLR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECHHHHHHHHHHCCHH GILEYLMGTEKIAHDVYSYLAEQTTDEKVRATLIWLAEIENGHYEKLRRLYVTLFGDYPE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC EEEE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA