Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223516

Identifier: 212223516

GI number: 212223516

Start: 343965

End: 345491

Strand: Reverse

Name: 212223516

Synonym: TON_0370

Alternate gene names: NA

Gene position: 345491-343965 (Counterclockwise)

Preceding gene: 212223517

Following gene: 212223515

Centisome position: 18.7

GC content: 53.77

Gene sequence:

>1527_bases
GTGAAGCTTAGAGGTCTGCCCCTGATAATTCTGATGATTCCGGTTTTTCTTCCGGCGGTAAGTGCCCAGTCGCCGCTCGC
CATAATCCCGCTCAACGACGAATTCTCAGGTGTTCCTGGGGACATCATAATAATCCCCTTCAAGCTCATGAATCTTGGAA
ACCAGACACTCTCAAACGTCACGGTTTACGTCACCGGCCCAACGGAGGGCTTCCTCTACCAGAGCAAGGTGATTCGAGAC
CCAATTGAACCGAACGAGACGATTCAGGACACGCTCTCCGTCAAGATACTCAACGTCGATCCCGGAAAATACACACTCAC
CCTCGTCGCGAGGGCCGGCTCCAGCTATTCAGAGGCCCAAATAACTGTCAGTGTGAAGACCTTTGTCGACTACGCCCTCA
GGATCGACGTAGGCGACGAGTACACTTACGGGAGCAACATCACGGCTGCCCTCAGGATAACATCCCAGGCGAACGGTGTC
ATCATAGGAAGAATAGGATATACTCTCTCCCGCGATGGTGATGTTCTCGAGACGTTCTCGACCACAATCTACCTGAAGCC
AGGTGAGAACTGGATAAAGAACATCACCCTCATTACGCCGAAGGTCGGGAACTACATGATCTACTTCTGGGCCAACTTCA
GCGGCAGATTCAAGAGCACAACGGCAACCTTCCGCGTTTACCAGAGGAACCTGAGATACGATGCCTACTTCAGGGACGGA
GCAATCTACGTCCACGTGTACGATGAGGACGAAAAGGGCGTTTCCGACATCTCCGTCAGGATAAATGGTGTACCCTTCAA
AACCGACGACGATGGAACCGTCTCTTACCTCGTGAACCAGCCGGGGACTTACGAGATAGTTCTCAATCTCGACGGAAAGA
TCGTTACGACCTTCGTAGAGGTGAAAAAGCTCTTTCTAAGCTATTTTCAGAAAAACGAGACACTTCTAGTGAAGGTGGTC
GATTCCACTGGAGAGCCCGTTCCAAACATAACAGTTACCGCATCAGGGCCGCTCGGCAAGGACTACGCTGTCACGAACTC
TTCGGGAATAACGGTTGTAGACCTTGAGAAAACGGGCTATGGAACCATTATGCTCAAGGCCGAGAGCAGCAGGTACGTGG
GAGCCGAGGCCAGTGCCAAGGTCGTCCCACCAGTAACGCCCACACCAACGCCAACCACCACTACCAGCTCGCCCTCGAAC
ACGACCACCACCCCCGTGCAGCCGCCAAAGAATTATGGTCCTCTCGCGGCAATACTCCTCATAGCCGGCGTCCTGCTCGC
CGGAACGTCCTACGCAGCGTTCTTCATGCCCATTATCCAGGAGGAGAGGCTCGACCGCTATTACTTCGTTAAAGTTAAGG
CCCCCAGACTGAGGAGCATTGACAACTTCCGCTTCGAGAAGGGAGTTACTGCCCTAGGTGCCAGGGCCACGAAGGGAAGC
GCGAAAGTGGAGGATAACAGGGTTTTGTGGGAGATAGAGCACCTCGAGCCCGGCGAGGAGGCCTACCTTCAGGTCATCCT
GGGCTGA

Upstream 100 bases:

>100_bases
AGCGGCGGCAAAAACTATAAGGTTAGCCTGCAGACACCAAACTATCTAACCTTTGACGAAGTTGTTGGAAAGCAGAGGTC
CCTCGAAGGGGTGATAAAGG

Downstream 100 bases:

>100_bases
CTTCTCTTTTCTCTTCGTAAACCTTATTAAGGAGGCCGAATACCTTCAGAGGGAAATCTAAAGGAGGCGAAAGCCATGGT
GAATATTGAACTTTTGAAGA

Product: membrane protein, conserved

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MKLRGLPLIILMIPVFLPAVSAQSPLAIIPLNDEFSGVPGDIIIIPFKLMNLGNQTLSNVTVYVTGPTEGFLYQSKVIRD
PIEPNETIQDTLSVKILNVDPGKYTLTLVARAGSSYSEAQITVSVKTFVDYALRIDVGDEYTYGSNITAALRITSQANGV
IIGRIGYTLSRDGDVLETFSTTIYLKPGENWIKNITLITPKVGNYMIYFWANFSGRFKSTTATFRVYQRNLRYDAYFRDG
AIYVHVYDEDEKGVSDISVRINGVPFKTDDDGTVSYLVNQPGTYEIVLNLDGKIVTTFVEVKKLFLSYFQKNETLLVKVV
DSTGEPVPNITVTASGPLGKDYAVTNSSGITVVDLEKTGYGTIMLKAESSRYVGAEASAKVVPPVTPTPTPTTTTSSPSN
TTTTPVQPPKNYGPLAAILLIAGVLLAGTSYAAFFMPIIQEERLDRYYFVKVKAPRLRSIDNFRFEKGVTALGARATKGS
AKVEDNRVLWEIEHLEPGEEAYLQVILG

Sequences:

>Translated_508_residues
MKLRGLPLIILMIPVFLPAVSAQSPLAIIPLNDEFSGVPGDIIIIPFKLMNLGNQTLSNVTVYVTGPTEGFLYQSKVIRD
PIEPNETIQDTLSVKILNVDPGKYTLTLVARAGSSYSEAQITVSVKTFVDYALRIDVGDEYTYGSNITAALRITSQANGV
IIGRIGYTLSRDGDVLETFSTTIYLKPGENWIKNITLITPKVGNYMIYFWANFSGRFKSTTATFRVYQRNLRYDAYFRDG
AIYVHVYDEDEKGVSDISVRINGVPFKTDDDGTVSYLVNQPGTYEIVLNLDGKIVTTFVEVKKLFLSYFQKNETLLVKVV
DSTGEPVPNITVTASGPLGKDYAVTNSSGITVVDLEKTGYGTIMLKAESSRYVGAEASAKVVPPVTPTPTPTTTTSSPSN
TTTTPVQPPKNYGPLAAILLIAGVLLAGTSYAAFFMPIIQEERLDRYYFVKVKAPRLRSIDNFRFEKGVTALGARATKGS
AKVEDNRVLWEIEHLEPGEEAYLQVILG
>Mature_508_residues
MKLRGLPLIILMIPVFLPAVSAQSPLAIIPLNDEFSGVPGDIIIIPFKLMNLGNQTLSNVTVYVTGPTEGFLYQSKVIRD
PIEPNETIQDTLSVKILNVDPGKYTLTLVARAGSSYSEAQITVSVKTFVDYALRIDVGDEYTYGSNITAALRITSQANGV
IIGRIGYTLSRDGDVLETFSTTIYLKPGENWIKNITLITPKVGNYMIYFWANFSGRFKSTTATFRVYQRNLRYDAYFRDG
AIYVHVYDEDEKGVSDISVRINGVPFKTDDDGTVSYLVNQPGTYEIVLNLDGKIVTTFVEVKKLFLSYFQKNETLLVKVV
DSTGEPVPNITVTASGPLGKDYAVTNSSGITVVDLEKTGYGTIMLKAESSRYVGAEASAKVVPPVTPTPTPTTTTSSPSN
TTTTPVQPPKNYGPLAAILLIAGVLLAGTSYAAFFMPIIQEERLDRYYFVKVKAPRLRSIDNFRFEKGVTALGARATKGS
AKVEDNRVLWEIEHLEPGEEAYLQVILG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55768; Mature: 55768

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRGLPLIILMIPVFLPAVSAQSPLAIIPLNDEFSGVPGDIIIIPFKLMNLGNQTLSNV
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCE
TVYVTGPTEGFLYQSKVIRDPIEPNETIQDTLSVKILNVDPGKYTLTLVARAGSSYSEAQ
EEEEECCCCCEEEEHHHHCCCCCCCCHHCCCEEEEEEEECCCCEEEEEEEECCCCCCCEE
ITVSVKTFVDYALRIDVGDEYTYGSNITAALRITSQANGVIIGRIGYTLSRDGDVLETFS
EEEEEEHEEEEEEEEECCCCEECCCCCEEEEEEECCCCCEEEEEECEEECCCCCEEEEEE
TTIYLKPGENWIKNITLITPKVGNYMIYFWANFSGRFKSTTATFRVYQRNLRYDAYFRDG
EEEEEECCCHHHCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEHHCCCEEEEEECC
AIYVHVYDEDEKGVSDISVRINGVPFKTDDDGTVSYLVNQPGTYEIVLNLDGKIVTTFVE
EEEEEEEECCCCCCEEEEEEEECEEECCCCCCEEEEEECCCCEEEEEEECCCEEEEHHHH
VKKLFLSYFQKNETLLVKVVDSTGEPVPNITVTASGPLGKDYAVTNSSGITVVDLEKTGY
HHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEEECCCC
GTIMLKAESSRYVGAEASAKVVPPVTPTPTPTTTTSSPSNTTTTPVQPPKNYGPLAAILL
EEEEEEECCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IAGVLLAGTSYAAFFMPIIQEERLDRYYFVKVKAPRLRSIDNFRFEKGVTALGARATKGS
HHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHCCCCEECCCCCCCC
AKVEDNRVLWEIEHLEPGEEAYLQVILG
CEEECCEEEEEEECCCCCCHHEEEEEEC
>Mature Secondary Structure
MKLRGLPLIILMIPVFLPAVSAQSPLAIIPLNDEFSGVPGDIIIIPFKLMNLGNQTLSNV
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCE
TVYVTGPTEGFLYQSKVIRDPIEPNETIQDTLSVKILNVDPGKYTLTLVARAGSSYSEAQ
EEEEECCCCCEEEEHHHHCCCCCCCCHHCCCEEEEEEEECCCCEEEEEEEECCCCCCCEE
ITVSVKTFVDYALRIDVGDEYTYGSNITAALRITSQANGVIIGRIGYTLSRDGDVLETFS
EEEEEEHEEEEEEEEECCCCEECCCCCEEEEEEECCCCCEEEEEECEEECCCCCEEEEEE
TTIYLKPGENWIKNITLITPKVGNYMIYFWANFSGRFKSTTATFRVYQRNLRYDAYFRDG
EEEEEECCCHHHCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEHHCCCEEEEEECC
AIYVHVYDEDEKGVSDISVRINGVPFKTDDDGTVSYLVNQPGTYEIVLNLDGKIVTTFVE
EEEEEEEECCCCCCEEEEEEEECEEECCCCCCEEEEEECCCCEEEEEEECCCEEEEHHHH
VKKLFLSYFQKNETLLVKVVDSTGEPVPNITVTASGPLGKDYAVTNSSGITVVDLEKTGY
HHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEEECCCC
GTIMLKAESSRYVGAEASAKVVPPVTPTPTPTTTTSSPSNTTTTPVQPPKNYGPLAAILL
EEEEEEECCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IAGVLLAGTSYAAFFMPIIQEERLDRYYFVKVKAPRLRSIDNFRFEKGVTALGARATKGS
HHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHCCCCEECCCCCCCC
AKVEDNRVLWEIEHLEPGEEAYLQVILG
CEEECCEEEEEEECCCCCCHHEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA