Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223468

Identifier: 212223468

GI number: 212223468

Start: 297243

End: 297965

Strand: Reverse

Name: 212223468

Synonym: TON_0322

Alternate gene names: NA

Gene position: 297965-297243 (Counterclockwise)

Preceding gene: 212223469

Following gene: 212223467

Centisome position: 16.13

GC content: 40.94

Gene sequence:

>723_bases
ATGTTGACTTCAAAAGAAGTCGAATGGAGATCTAAAATCCAGAGTTCTTACCTGTTACCCACCATTATGGATGGCAAGAA
CCTCGTAGTAACGACTCCAATGGGCTTTAAAGCAATATTTACCGTTGGTATCAAGGCTCATTATGAGCTTTCACAAAGTC
AGTATCCTAGACGGATGGAATCCTCTCAGATATTGCTTCGGCTTGGGCGACGAGATGACATTATTAAAGTCGAGATTCTA
CGTAAGTCTCTGGGCATTGAGCTCACAAGAAAAATCAAAGCGCTTCCAAGTTCTCAAAGTGGCCCGTATAAGGCCGTTGA
TTATTTGGTTAAAATACACACTCCCAATTTAATGTGGGTTTCAGTTGTTGAAGGAACATCTAAAGAGAAGCTTGAAGAAC
TGCTTTCTATCTTGAGGAAGTTTGGTATGGGTAAAAAACGCAATATGGGGTGGGGGGATCTTTTGGATTACCATATCTAT
CCCCTAGACCGCAATAGTAGAAGTGCAATAACTTCTGAGTATATTATCCATAACAAAAAATTCTTGGAAACTTGGAGGCC
ATGGTCTCCAGAAAAAATCGCAGAGCTAGTAAAAGGATCACGAAGAATGACCCAATACAGGAAATTTTCCCTCTTAGACT
CCAAAATTGGATACGGTGCCGAAAAACCACCTTACTGGAGAAGACATCTAGTCATCAAATCTGCCCTGTTCCAAGTTTCG
TAG

Upstream 100 bases:

>100_bases
CCCAAGAACTAACGCCCTTGGATGGTGCATTGGCATTCGCAGAATACTACAAAATTAAACTATCCACCGATTCGGATTGG
AGGATGCAATATTAGAAGAC

Downstream 100 bases:

>100_bases
CAGAAATCACCAGCCGCTGGTAGCGTGGTTCTGAGGTGGATGAGATGGGGTATCCCGAAGAGATTGAGGAGTTTAACGAG
AGGATTCGGAACGCGATAGT

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MLTSKEVEWRSKIQSSYLLPTIMDGKNLVVTTPMGFKAIFTVGIKAHYELSQSQYPRRMESSQILLRLGRRDDIIKVEIL
RKSLGIELTRKIKALPSSQSGPYKAVDYLVKIHTPNLMWVSVVEGTSKEKLEELLSILRKFGMGKKRNMGWGDLLDYHIY
PLDRNSRSAITSEYIIHNKKFLETWRPWSPEKIAELVKGSRRMTQYRKFSLLDSKIGYGAEKPPYWRRHLVIKSALFQVS

Sequences:

>Translated_240_residues
MLTSKEVEWRSKIQSSYLLPTIMDGKNLVVTTPMGFKAIFTVGIKAHYELSQSQYPRRMESSQILLRLGRRDDIIKVEIL
RKSLGIELTRKIKALPSSQSGPYKAVDYLVKIHTPNLMWVSVVEGTSKEKLEELLSILRKFGMGKKRNMGWGDLLDYHIY
PLDRNSRSAITSEYIIHNKKFLETWRPWSPEKIAELVKGSRRMTQYRKFSLLDSKIGYGAEKPPYWRRHLVIKSALFQVS
>Mature_240_residues
MLTSKEVEWRSKIQSSYLLPTIMDGKNLVVTTPMGFKAIFTVGIKAHYELSQSQYPRRMESSQILLRLGRRDDIIKVEIL
RKSLGIELTRKIKALPSSQSGPYKAVDYLVKIHTPNLMWVSVVEGTSKEKLEELLSILRKFGMGKKRNMGWGDLLDYHIY
PLDRNSRSAITSEYIIHNKKFLETWRPWSPEKIAELVKGSRRMTQYRKFSLLDSKIGYGAEKPPYWRRHLVIKSALFQVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27893; Mature: 27893

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSKEVEWRSKIQSSYLLPTIMDGKNLVVTTPMGFKAIFTVGIKAHYELSQSQYPRRME
CCCCCCHHHHHHHHHCCCCEEEECCCCEEEECCCCCEEEEEEHHHHEEECCHHHCCHHHH
SSQILLRLGRRDDIIKVEILRKSLGIELTRKIKALPSSQSGPYKAVDYLVKIHTPNLMWV
HHHHHHHHCCCCCEEHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHEEEEEEEECCCEEEE
SVVEGTSKEKLEELLSILRKFGMGKKRNMGWGDLLDYHIYPLDRNSRSAITSEYIIHNKK
EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHCHH
FLETWRPWSPEKIAELVKGSRRMTQYRKFSLLDSKIGYGAEKPPYWRRHLVIKSALFQVS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTSKEVEWRSKIQSSYLLPTIMDGKNLVVTTPMGFKAIFTVGIKAHYELSQSQYPRRME
CCCCCCHHHHHHHHHCCCCEEEECCCCEEEECCCCCEEEEEEHHHHEEECCHHHCCHHHH
SSQILLRLGRRDDIIKVEILRKSLGIELTRKIKALPSSQSGPYKAVDYLVKIHTPNLMWV
HHHHHHHHCCCCCEEHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHEEEEEEEECCCEEEE
SVVEGTSKEKLEELLSILRKFGMGKKRNMGWGDLLDYHIYPLDRNSRSAITSEYIIHNKK
EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEECCCCCCHHHHHHHHHHCHH
FLETWRPWSPEKIAELVKGSRRMTQYRKFSLLDSKIGYGAEKPPYWRRHLVIKSALFQVS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA