| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223344
Identifier: 212223344
GI number: 212223344
Start: 175303
End: 176613
Strand: Reverse
Name: 212223344
Synonym: TON_0198
Alternate gene names: NA
Gene position: 176613-175303 (Counterclockwise)
Preceding gene: 212223345
Following gene: 212223343
Centisome position: 9.56
GC content: 54.31
Gene sequence:
>1311_bases ATGAACAGGAAAGGCTTCAGCTGGAGTGTTGTTCTCGGTCTGGCCCTGCTCGGATTCAGCAGGAGCGTCGGCTGGGCACT GAATAAGGGCCTCTCCTTCCCGCTGCTTTCGAGCTACACACAATCGGCCTTTGTGAAAGGAACGATTTTGGCTTTCGAGG GTTTCATCGGTCTGTTCATCCCCGTTCTTCTCGGCTATTACAGCGATACGCTCAAATCAAGGCACGGAAGGAGAAGGCCA TTCATTATGGTGGGTGGTCTTCTGGCAGGAATAGCCGCGTTGATGATCTACACTGCCTACGCCATGGGAGTCCCACTCTG GGGCTTCGCACTGACGCTGGGATTTTTCTACCTCTCGATGCACCTTTACACAGCACAGTATAGGGCTTTGATGCCCGACA CCATCGAGAGCGGTCAGAGGGGTAAGGCCAGCGGAGTTATCACACTCCTCGAATGGGCCGGCAACCTCTTCCTCTTCGGC CTTGCCGGCTACCTCATAGCAAAGGCCGTGGCCGAAACTGGTGAGAGCGAAGGGATAAAGGCCCTTGCACAGACGCCCTA CCTCAAGGTTCCATTCCTCGTTACGGCTTTCTTCCTCATAGGTGCGGCCCTCTTCGTTTACTTCATCGTTAAGGAGCCCG AAGCACCGGAGATTGAGGAGAACGAGAGCCTCAAGGATTACCTCAAGAGCATCGTCGAAAACCGTGACTTCCTCAAGTTC TACGCGGCCCAGACACTCTGGTGGATGAGCTTCGAGTTCATAGCGATTTTCCTCTACGGTATCTTGGCGTACATCCTCCA CGGCTCGGCCAGCGAGGAGAACGTTAAAGCTGTGACCTCCCTCGGTCTCTATCTCATGGCACTCTTTAATGTCACTGTTC TGCTAGGTGCTCTCCCGGGAGGTCTCATCTACGACAAGCTTGGCAGGAGGCTCAGCATAATCCTTGGCGGCGTTATCTTT GCACTACCGCAGCTCTGGGGCTGGTTCATAACAAACCAGACGGAGATAGTGATAGCCCTTGGAATAGCGGGAATCGGCTG GGGAATCCTGATGGCAGCCTCTTACCCTGTTATCGGCGATCTGCTTACCCACTATGAAAAAGAGGCCTTCACTGGCAGAT ACTATGGCTTCTTTGAGGCGACGCGCTCCCTTCCGGTGCTGCTGGCAGGAATAGTCGGCGGTGCCATAGTTGATCTGGCC GGCGAGAACTACAGAATACTCTTCCCGATAGGCGCAATCCTCGTGCTCTTGGCCATGCCGATGATATGGCACATGAGGAA CCTCGAGGTCAGCAAAGCAGAATCAGAGTGA
Upstream 100 bases:
>100_bases GACTGAGCCCTTTTCTATTCTTACTTTTCCTTAGTCCGCCAAACCGAAAAGGTAAAAACTCCATTTTAACATAAAGGTGT CAAAATAAGGAGGTGAAACC
Downstream 100 bases:
>100_bases GGTGATAGCATGGGCTGGCTTATTGGCCTTGGGATCCTTATCTTCCTCTTTATTCTCTTCGTCGCATTCGTCGGCTACAA GATGGTGAAGCCCCCCCGGC
Product: permease
Products: NA
Alternate protein names: Facilitator Superfamily Permease; Permease; Transporter Facilitator Family; Permease Facilitator Superfamily
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MNRKGFSWSVVLGLALLGFSRSVGWALNKGLSFPLLSSYTQSAFVKGTILAFEGFIGLFIPVLLGYYSDTLKSRHGRRRP FIMVGGLLAGIAALMIYTAYAMGVPLWGFALTLGFFYLSMHLYTAQYRALMPDTIESGQRGKASGVITLLEWAGNLFLFG LAGYLIAKAVAETGESEGIKALAQTPYLKVPFLVTAFFLIGAALFVYFIVKEPEAPEIEENESLKDYLKSIVENRDFLKF YAAQTLWWMSFEFIAIFLYGILAYILHGSASEENVKAVTSLGLYLMALFNVTVLLGALPGGLIYDKLGRRLSIILGGVIF ALPQLWGWFITNQTEIVIALGIAGIGWGILMAASYPVIGDLLTHYEKEAFTGRYYGFFEATRSLPVLLAGIVGGAIVDLA GENYRILFPIGAILVLLAMPMIWHMRNLEVSKAESE
Sequences:
>Translated_436_residues MNRKGFSWSVVLGLALLGFSRSVGWALNKGLSFPLLSSYTQSAFVKGTILAFEGFIGLFIPVLLGYYSDTLKSRHGRRRP FIMVGGLLAGIAALMIYTAYAMGVPLWGFALTLGFFYLSMHLYTAQYRALMPDTIESGQRGKASGVITLLEWAGNLFLFG LAGYLIAKAVAETGESEGIKALAQTPYLKVPFLVTAFFLIGAALFVYFIVKEPEAPEIEENESLKDYLKSIVENRDFLKF YAAQTLWWMSFEFIAIFLYGILAYILHGSASEENVKAVTSLGLYLMALFNVTVLLGALPGGLIYDKLGRRLSIILGGVIF ALPQLWGWFITNQTEIVIALGIAGIGWGILMAASYPVIGDLLTHYEKEAFTGRYYGFFEATRSLPVLLAGIVGGAIVDLA GENYRILFPIGAILVLLAMPMIWHMRNLEVSKAESE >Mature_436_residues MNRKGFSWSVVLGLALLGFSRSVGWALNKGLSFPLLSSYTQSAFVKGTILAFEGFIGLFIPVLLGYYSDTLKSRHGRRRP FIMVGGLLAGIAALMIYTAYAMGVPLWGFALTLGFFYLSMHLYTAQYRALMPDTIESGQRGKASGVITLLEWAGNLFLFG LAGYLIAKAVAETGESEGIKALAQTPYLKVPFLVTAFFLIGAALFVYFIVKEPEAPEIEENESLKDYLKSIVENRDFLKF YAAQTLWWMSFEFIAIFLYGILAYILHGSASEENVKAVTSLGLYLMALFNVTVLLGALPGGLIYDKLGRRLSIILGGVIF ALPQLWGWFITNQTEIVIALGIAGIGWGILMAASYPVIGDLLTHYEKEAFTGRYYGFFEATRSLPVLLAGIVGGAIVDLA GENYRILFPIGAILVLLAMPMIWHMRNLEVSKAESE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47923; Mature: 47923
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKGFSWSVVLGLALLGFSRSVGWALNKGLSFPLLSSYTQSAFVKGTILAFEGFIGLFI CCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PVLLGYYSDTLKSRHGRRRPFIMVGGLLAGIAALMIYTAYAMGVPLWGFALTLGFFYLSM HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HLYTAQYRALMPDTIESGQRGKASGVITLLEWAGNLFLFGLAGYLIAKAVAETGESEGIK HHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHH ALAQTPYLKVPFLVTAFFLIGAALFVYFIVKEPEAPEIEENESLKDYLKSIVENRDFLKF HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH YAAQTLWWMSFEFIAIFLYGILAYILHGSASEENVKAVTSLGLYLMALFNVTVLLGALPG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLIYDKLGRRLSIILGGVIFALPQLWGWFITNQTEIVIALGIAGIGWGILMAASYPVIGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCHHHH LLTHYEKEAFTGRYYGFFEATRSLPVLLAGIVGGAIVDLAGENYRILFPIGAILVLLAMP HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHHHHHHH MIWHMRNLEVSKAESE HHHHHHCCCCCCCCCC >Mature Secondary Structure MNRKGFSWSVVLGLALLGFSRSVGWALNKGLSFPLLSSYTQSAFVKGTILAFEGFIGLFI CCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PVLLGYYSDTLKSRHGRRRPFIMVGGLLAGIAALMIYTAYAMGVPLWGFALTLGFFYLSM HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HLYTAQYRALMPDTIESGQRGKASGVITLLEWAGNLFLFGLAGYLIAKAVAETGESEGIK HHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHH ALAQTPYLKVPFLVTAFFLIGAALFVYFIVKEPEAPEIEENESLKDYLKSIVENRDFLKF HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH YAAQTLWWMSFEFIAIFLYGILAYILHGSASEENVKAVTSLGLYLMALFNVTVLLGALPG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLIYDKLGRRLSIILGGVIFALPQLWGWFITNQTEIVIALGIAGIGWGILMAASYPVIGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCHHHH LLTHYEKEAFTGRYYGFFEATRSLPVLLAGIVGGAIVDLAGENYRILFPIGAILVLLAMP HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEHHHHHHHHHHH MIWHMRNLEVSKAESE HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA