Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223344

Identifier: 212223344

GI number: 212223344

Start: 175303

End: 176613

Strand: Reverse

Name: 212223344

Synonym: TON_0198

Alternate gene names: NA

Gene position: 176613-175303 (Counterclockwise)

Preceding gene: 212223345

Following gene: 212223343

Centisome position: 9.56

GC content: 54.31

Gene sequence:

>1311_bases
ATGAACAGGAAAGGCTTCAGCTGGAGTGTTGTTCTCGGTCTGGCCCTGCTCGGATTCAGCAGGAGCGTCGGCTGGGCACT
GAATAAGGGCCTCTCCTTCCCGCTGCTTTCGAGCTACACACAATCGGCCTTTGTGAAAGGAACGATTTTGGCTTTCGAGG
GTTTCATCGGTCTGTTCATCCCCGTTCTTCTCGGCTATTACAGCGATACGCTCAAATCAAGGCACGGAAGGAGAAGGCCA
TTCATTATGGTGGGTGGTCTTCTGGCAGGAATAGCCGCGTTGATGATCTACACTGCCTACGCCATGGGAGTCCCACTCTG
GGGCTTCGCACTGACGCTGGGATTTTTCTACCTCTCGATGCACCTTTACACAGCACAGTATAGGGCTTTGATGCCCGACA
CCATCGAGAGCGGTCAGAGGGGTAAGGCCAGCGGAGTTATCACACTCCTCGAATGGGCCGGCAACCTCTTCCTCTTCGGC
CTTGCCGGCTACCTCATAGCAAAGGCCGTGGCCGAAACTGGTGAGAGCGAAGGGATAAAGGCCCTTGCACAGACGCCCTA
CCTCAAGGTTCCATTCCTCGTTACGGCTTTCTTCCTCATAGGTGCGGCCCTCTTCGTTTACTTCATCGTTAAGGAGCCCG
AAGCACCGGAGATTGAGGAGAACGAGAGCCTCAAGGATTACCTCAAGAGCATCGTCGAAAACCGTGACTTCCTCAAGTTC
TACGCGGCCCAGACACTCTGGTGGATGAGCTTCGAGTTCATAGCGATTTTCCTCTACGGTATCTTGGCGTACATCCTCCA
CGGCTCGGCCAGCGAGGAGAACGTTAAAGCTGTGACCTCCCTCGGTCTCTATCTCATGGCACTCTTTAATGTCACTGTTC
TGCTAGGTGCTCTCCCGGGAGGTCTCATCTACGACAAGCTTGGCAGGAGGCTCAGCATAATCCTTGGCGGCGTTATCTTT
GCACTACCGCAGCTCTGGGGCTGGTTCATAACAAACCAGACGGAGATAGTGATAGCCCTTGGAATAGCGGGAATCGGCTG
GGGAATCCTGATGGCAGCCTCTTACCCTGTTATCGGCGATCTGCTTACCCACTATGAAAAAGAGGCCTTCACTGGCAGAT
ACTATGGCTTCTTTGAGGCGACGCGCTCCCTTCCGGTGCTGCTGGCAGGAATAGTCGGCGGTGCCATAGTTGATCTGGCC
GGCGAGAACTACAGAATACTCTTCCCGATAGGCGCAATCCTCGTGCTCTTGGCCATGCCGATGATATGGCACATGAGGAA
CCTCGAGGTCAGCAAAGCAGAATCAGAGTGA

Upstream 100 bases:

>100_bases
GACTGAGCCCTTTTCTATTCTTACTTTTCCTTAGTCCGCCAAACCGAAAAGGTAAAAACTCCATTTTAACATAAAGGTGT
CAAAATAAGGAGGTGAAACC

Downstream 100 bases:

>100_bases
GGTGATAGCATGGGCTGGCTTATTGGCCTTGGGATCCTTATCTTCCTCTTTATTCTCTTCGTCGCATTCGTCGGCTACAA
GATGGTGAAGCCCCCCCGGC

Product: permease

Products: NA

Alternate protein names: Facilitator Superfamily Permease; Permease; Transporter Facilitator Family; Permease Facilitator Superfamily

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MNRKGFSWSVVLGLALLGFSRSVGWALNKGLSFPLLSSYTQSAFVKGTILAFEGFIGLFIPVLLGYYSDTLKSRHGRRRP
FIMVGGLLAGIAALMIYTAYAMGVPLWGFALTLGFFYLSMHLYTAQYRALMPDTIESGQRGKASGVITLLEWAGNLFLFG
LAGYLIAKAVAETGESEGIKALAQTPYLKVPFLVTAFFLIGAALFVYFIVKEPEAPEIEENESLKDYLKSIVENRDFLKF
YAAQTLWWMSFEFIAIFLYGILAYILHGSASEENVKAVTSLGLYLMALFNVTVLLGALPGGLIYDKLGRRLSIILGGVIF
ALPQLWGWFITNQTEIVIALGIAGIGWGILMAASYPVIGDLLTHYEKEAFTGRYYGFFEATRSLPVLLAGIVGGAIVDLA
GENYRILFPIGAILVLLAMPMIWHMRNLEVSKAESE

Sequences:

>Translated_436_residues
MNRKGFSWSVVLGLALLGFSRSVGWALNKGLSFPLLSSYTQSAFVKGTILAFEGFIGLFIPVLLGYYSDTLKSRHGRRRP
FIMVGGLLAGIAALMIYTAYAMGVPLWGFALTLGFFYLSMHLYTAQYRALMPDTIESGQRGKASGVITLLEWAGNLFLFG
LAGYLIAKAVAETGESEGIKALAQTPYLKVPFLVTAFFLIGAALFVYFIVKEPEAPEIEENESLKDYLKSIVENRDFLKF
YAAQTLWWMSFEFIAIFLYGILAYILHGSASEENVKAVTSLGLYLMALFNVTVLLGALPGGLIYDKLGRRLSIILGGVIF
ALPQLWGWFITNQTEIVIALGIAGIGWGILMAASYPVIGDLLTHYEKEAFTGRYYGFFEATRSLPVLLAGIVGGAIVDLA
GENYRILFPIGAILVLLAMPMIWHMRNLEVSKAESE
>Mature_436_residues
MNRKGFSWSVVLGLALLGFSRSVGWALNKGLSFPLLSSYTQSAFVKGTILAFEGFIGLFIPVLLGYYSDTLKSRHGRRRP
FIMVGGLLAGIAALMIYTAYAMGVPLWGFALTLGFFYLSMHLYTAQYRALMPDTIESGQRGKASGVITLLEWAGNLFLFG
LAGYLIAKAVAETGESEGIKALAQTPYLKVPFLVTAFFLIGAALFVYFIVKEPEAPEIEENESLKDYLKSIVENRDFLKF
YAAQTLWWMSFEFIAIFLYGILAYILHGSASEENVKAVTSLGLYLMALFNVTVLLGALPGGLIYDKLGRRLSIILGGVIF
ALPQLWGWFITNQTEIVIALGIAGIGWGILMAASYPVIGDLLTHYEKEAFTGRYYGFFEATRSLPVLLAGIVGGAIVDLA
GENYRILFPIGAILVLLAMPMIWHMRNLEVSKAESE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47923; Mature: 47923

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCCCCCC
>Mature Secondary Structure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HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA