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The map label for this gene is 212223206

Identifier: 212223206

GI number: 212223206

Start: 55623

End: 56777

Strand: Reverse

Name: 212223206

Synonym: TON_0061

Alternate gene names: NA

Gene position: 56777-55623 (Counterclockwise)

Preceding gene: 212223260

Following gene: 212223205

Centisome position: 3.07

GC content: 54.46

Gene sequence:

>1155_bases
ATGGAGCTCAGGTTCGACATGGAGTATGAGGAAGCTTACAGGGAGCTTTATGAAATAGTCAGGCCGAAGTACAAGCTCTT
CACAGCAGGTCCTGTTGCTTGTTTCCCGGAGGTTCTCGCGATAATGAGCGTCCAGATGTTCAGCCACCGCTCGGCTGAGG
CAAAGGAGGCTCACGTTGATACACTCAACAGGCTCAAGGCCTTCCTCGAGGCCGATAAAGGCGAGATAATCCTCTTCCCG
AGCTCTGGAACTGGCTTCATGGAGGCCGCTGTGAGAAACACCATCCCGCGCGGTGGAAAAGTTCTCGTCACGATCATTGG
CGCGTTTGGAAAGCGCTTTGCTGACGTCGTCAATGCTAACGGAAGGGAAGCCATTGTATTTGAAAAGGAGCCTGGAAAGG
CCATCAAGCCAGAGGAGCTTGATGAAGTCCTCAAGAAGAACCCTGACGTTCACGCAGTCACCATAACCTACAACGAGACG
AGCACTGGTGTTCTTAACCCGCTTCCGGAGCTTGCTAAGGTCGTCAAGGAGCACGACAAACTCCTCTTCGTCGATGCCGT
CTCTGCCATGGGCGGAGCGGACATCAAGTTCGACAAGTGGGGCATCGATTTGGTCTTCGCGAGCAGCCAGAAAGCCTTCG
GTGTTCCACCAGGATTAGCGGTTGCCGCCGTTAGTGAGAGAGTCTTTGAGATCGCCGAGAGGATGCCCGAGCGCGGCTGG
TACTTCGACCTGCCGCTCTACAAGAAGTTCAACGAGAAGAAGAAGGGAACACCCTCAACTCCACCACTCCCACAGATATT
TGGCCTCAACGTCGTCCTCAGGATAATCGAGAAGATGGGCGGCAAAGGTGCCTGGCTCGATATGTACAGGAAGAGGAGTG
AGATGATACGCGAGGGCGTCAAGGAGATGGGCCTCGGAATCCTCGCCGAGCCAGGCTACGAGAGCCCAACCATCACTGCC
GTCGTCGTTCCTGAGGGAATGAAGGGCGTTGACGTCTACAACGCCATGCGCGAGAGGGGCTTTGAGCTCGCCAAGGGCTA
TGGAAGCGTCGCTGAAAAGACATTCAGGATTGGAAACATGGGCTACATGACATTCGACGACATAAGGGAGATGCTCGACA
ACCTGAGGGTGGTCATAGAAAAGCTTAAGGCCTGA

Upstream 100 bases:

>100_bases
TTTTATTGCCGGCGAAACGAACATAGCTTCGATAAGCCACGTGAAGGGACTAACGAACCATTTTTATATTTCCCTTCCAA
CCCCCGCCGAGGTGATGCTG

Downstream 100 bases:

>100_bases
TGCTCCCTTTATATTTCTCCAGTGAAAGTAATGGCAAAGAAAATATGGATTGCACTGTGGCTTTTCATCAATCTTCTGAT
ATTTTGGAGTGTTGGACTCT

Product: probable serine-glyoxylate aminotransferase, class V

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MELRFDMEYEEAYRELYEIVRPKYKLFTAGPVACFPEVLAIMSVQMFSHRSAEAKEAHVDTLNRLKAFLEADKGEIILFP
SSGTGFMEAAVRNTIPRGGKVLVTIIGAFGKRFADVVNANGREAIVFEKEPGKAIKPEELDEVLKKNPDVHAVTITYNET
STGVLNPLPELAKVVKEHDKLLFVDAVSAMGGADIKFDKWGIDLVFASSQKAFGVPPGLAVAAVSERVFEIAERMPERGW
YFDLPLYKKFNEKKKGTPSTPPLPQIFGLNVVLRIIEKMGGKGAWLDMYRKRSEMIREGVKEMGLGILAEPGYESPTITA
VVVPEGMKGVDVYNAMRERGFELAKGYGSVAEKTFRIGNMGYMTFDDIREMLDNLRVVIEKLKA

Sequences:

>Translated_384_residues
MELRFDMEYEEAYRELYEIVRPKYKLFTAGPVACFPEVLAIMSVQMFSHRSAEAKEAHVDTLNRLKAFLEADKGEIILFP
SSGTGFMEAAVRNTIPRGGKVLVTIIGAFGKRFADVVNANGREAIVFEKEPGKAIKPEELDEVLKKNPDVHAVTITYNET
STGVLNPLPELAKVVKEHDKLLFVDAVSAMGGADIKFDKWGIDLVFASSQKAFGVPPGLAVAAVSERVFEIAERMPERGW
YFDLPLYKKFNEKKKGTPSTPPLPQIFGLNVVLRIIEKMGGKGAWLDMYRKRSEMIREGVKEMGLGILAEPGYESPTITA
VVVPEGMKGVDVYNAMRERGFELAKGYGSVAEKTFRIGNMGYMTFDDIREMLDNLRVVIEKLKA
>Mature_384_residues
MELRFDMEYEEAYRELYEIVRPKYKLFTAGPVACFPEVLAIMSVQMFSHRSAEAKEAHVDTLNRLKAFLEADKGEIILFP
SSGTGFMEAAVRNTIPRGGKVLVTIIGAFGKRFADVVNANGREAIVFEKEPGKAIKPEELDEVLKKNPDVHAVTITYNET
STGVLNPLPELAKVVKEHDKLLFVDAVSAMGGADIKFDKWGIDLVFASSQKAFGVPPGLAVAAVSERVFEIAERMPERGW
YFDLPLYKKFNEKKKGTPSTPPLPQIFGLNVVLRIIEKMGGKGAWLDMYRKRSEMIREGVKEMGLGILAEPGYESPTITA
VVVPEGMKGVDVYNAMRERGFELAKGYGSVAEKTFRIGNMGYMTFDDIREMLDNLRVVIEKLKA

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=368, Percent_Identity=24.7282608695652, Blast_Score=129, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI17536281, Length=353, Percent_Identity=28.328611898017, Blast_Score=138, Evalue=6e-33,
Organism=Saccharomyces cerevisiae, GI6321079, Length=384, Percent_Identity=27.0833333333333, Blast_Score=116, Evalue=5e-27,
Organism=Drosophila melanogaster, GI17530823, Length=351, Percent_Identity=29.6296296296296, Blast_Score=127, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: NA

Molecular weight: Translated: 42803; Mature: 42803

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRFDMEYEEAYRELYEIVRPKYKLFTAGPVACFPEVLAIMSVQMFSHRSAEAKEAHVD
CCEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
TLNRLKAFLEADKGEIILFPSSGTGFMEAAVRNTIPRGGKVLVTIIGAFGKRFADVVNAN
HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCC
GREAIVFEKEPGKAIKPEELDEVLKKNPDVHAVTITYNETSTGVLNPLPELAKVVKEHDK
CCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
LLFVDAVSAMGGADIKFDKWGIDLVFASSQKAFGVPPGLAVAAVSERVFEIAERMPERGW
EEEEEHHHHCCCCCCEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
YFDLPLYKKFNEKKKGTPSTPPLPQIFGLNVVLRIIEKMGGKGAWLDMYRKRSEMIREGV
EECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KEMGLGILAEPGYESPTITAVVVPEGMKGVDVYNAMRERGFELAKGYGSVAEKTFRIGNM
HHHCCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
GYMTFDDIREMLDNLRVVIEKLKA
CCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELRFDMEYEEAYRELYEIVRPKYKLFTAGPVACFPEVLAIMSVQMFSHRSAEAKEAHVD
CCEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
TLNRLKAFLEADKGEIILFPSSGTGFMEAAVRNTIPRGGKVLVTIIGAFGKRFADVVNAN
HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCC
GREAIVFEKEPGKAIKPEELDEVLKKNPDVHAVTITYNETSTGVLNPLPELAKVVKEHDK
CCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCC
LLFVDAVSAMGGADIKFDKWGIDLVFASSQKAFGVPPGLAVAAVSERVFEIAERMPERGW
EEEEEHHHHCCCCCCEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
YFDLPLYKKFNEKKKGTPSTPPLPQIFGLNVVLRIIEKMGGKGAWLDMYRKRSEMIREGV
EECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KEMGLGILAEPGYESPTITAVVVPEGMKGVDVYNAMRERGFELAKGYGSVAEKTFRIGNM
HHHCCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
GYMTFDDIREMLDNLRVVIEKLKA
CCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]