Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223170

Identifier: 212223170

GI number: 212223170

Start: 24573

End: 25022

Strand: Reverse

Name: 212223170

Synonym: TON_0025

Alternate gene names: NA

Gene position: 25022-24573 (Counterclockwise)

Preceding gene: 212223180

Following gene: 212223167

Centisome position: 1.35

GC content: 52.67

Gene sequence:

>450_bases
ATGAACTGTCCGTTCTGCAATCCAAGCGCTGAAGTCATCCTCTATGAAGACGGGCTGATCAGGATACTTATCGACTCATA
TCCAGCGAGCAGAGGCCATCTCCTTGTCGTTCCAAAGAGGCACGTCGAGCACTGGGAAGAACTGACGGAAGAAGAAAAGA
CCGCACTGGTCAACGGTATAGACCTTGCGATGGAAGGGTTGAAGAAGGCGCTCAAGCCTGATGCATTCAACATCGGTATG
AACCTTGGGAGAGCAGCAGGACAGACGGTTCCCCACCTTCACATGCATGTGATTCCAAGATGGGAGGGAGACTGCAGGCA
CCCGCGTGGCGGCGTCAGAAAGGCGGTCCTCGATCTGGAAGACGAGAACTTGAACTTGAGAGAGCGGTGGAAGAAGAACA
GACTGAATAGGGAGGAGATGGAGGGTCTGAGGAAAGCGTTCAAGCTTTAA

Upstream 100 bases:

>100_bases
AAAACCTCTGGTACGTTCTCTTTAGGATTTCCATAGTTTCCTCCATCTCACCACCGAGGGGTTTTTATTGCAAGGCAGTT
TTAAGCCTTTGGTGTTGGGC

Downstream 100 bases:

>100_bases
CAGGATACTTCTCTTCGTTCTTCTCCAGCTTTCTTTTGACGGCCTCGTCGAGGTCTATTCCAAGCTCGTGGGCGAGGAGT
GTAAGGTAGATTATGACATC

Product: probable bis(5'-adenosyl)-triphosphatase, HIT family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNCPFCNPSAEVILYEDGLIRILIDSYPASRGHLLVVPKRHVEHWEELTEEEKTALVNGIDLAMEGLKKALKPDAFNIGM
NLGRAAGQTVPHLHMHVIPRWEGDCRHPRGGVRKAVLDLEDENLNLRERWKKNRLNREEMEGLRKAFKL

Sequences:

>Translated_149_residues
MNCPFCNPSAEVILYEDGLIRILIDSYPASRGHLLVVPKRHVEHWEELTEEEKTALVNGIDLAMEGLKKALKPDAFNIGM
NLGRAAGQTVPHLHMHVIPRWEGDCRHPRGGVRKAVLDLEDENLNLRERWKKNRLNREEMEGLRKAFKL
>Mature_149_residues
MNCPFCNPSAEVILYEDGLIRILIDSYPASRGHLLVVPKRHVEHWEELTEEEKTALVNGIDLAMEGLKKALKPDAFNIGM
NLGRAAGQTVPHLHMHVIPRWEGDCRHPRGGVRKAVLDLEDENLNLRERWKKNRLNREEMEGLRKAFKL

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 17123; Mature: 17123

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCPFCNPSAEVILYEDGLIRILIDSYPASRGHLLVVPKRHVEHWEELTEEEKTALVNGI
CCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
DLAMEGLKKALKPDAFNIGMNLGRAAGQTVPHLHMHVIPRWEGDCRHPRGGVRKAVLDLE
HHHHHHHHHHHCCCCEECCCHHCHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCC
DENLNLRERWKKNRLNREEMEGLRKAFKL
CCCCCHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNCPFCNPSAEVILYEDGLIRILIDSYPASRGHLLVVPKRHVEHWEELTEEEKTALVNGI
CCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
DLAMEGLKKALKPDAFNIGMNLGRAAGQTVPHLHMHVIPRWEGDCRHPRGGVRKAVLDLE
HHHHHHHHHHHCCCCEECCCHHCHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCC
DENLNLRERWKKNRLNREEMEGLRKAFKL
CCCCCHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]