| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223170
Identifier: 212223170
GI number: 212223170
Start: 24573
End: 25022
Strand: Reverse
Name: 212223170
Synonym: TON_0025
Alternate gene names: NA
Gene position: 25022-24573 (Counterclockwise)
Preceding gene: 212223180
Following gene: 212223167
Centisome position: 1.35
GC content: 52.67
Gene sequence:
>450_bases ATGAACTGTCCGTTCTGCAATCCAAGCGCTGAAGTCATCCTCTATGAAGACGGGCTGATCAGGATACTTATCGACTCATA TCCAGCGAGCAGAGGCCATCTCCTTGTCGTTCCAAAGAGGCACGTCGAGCACTGGGAAGAACTGACGGAAGAAGAAAAGA CCGCACTGGTCAACGGTATAGACCTTGCGATGGAAGGGTTGAAGAAGGCGCTCAAGCCTGATGCATTCAACATCGGTATG AACCTTGGGAGAGCAGCAGGACAGACGGTTCCCCACCTTCACATGCATGTGATTCCAAGATGGGAGGGAGACTGCAGGCA CCCGCGTGGCGGCGTCAGAAAGGCGGTCCTCGATCTGGAAGACGAGAACTTGAACTTGAGAGAGCGGTGGAAGAAGAACA GACTGAATAGGGAGGAGATGGAGGGTCTGAGGAAAGCGTTCAAGCTTTAA
Upstream 100 bases:
>100_bases AAAACCTCTGGTACGTTCTCTTTAGGATTTCCATAGTTTCCTCCATCTCACCACCGAGGGGTTTTTATTGCAAGGCAGTT TTAAGCCTTTGGTGTTGGGC
Downstream 100 bases:
>100_bases CAGGATACTTCTCTTCGTTCTTCTCCAGCTTTCTTTTGACGGCCTCGTCGAGGTCTATTCCAAGCTCGTGGGCGAGGAGT GTAAGGTAGATTATGACATC
Product: probable bis(5'-adenosyl)-triphosphatase, HIT family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNCPFCNPSAEVILYEDGLIRILIDSYPASRGHLLVVPKRHVEHWEELTEEEKTALVNGIDLAMEGLKKALKPDAFNIGM NLGRAAGQTVPHLHMHVIPRWEGDCRHPRGGVRKAVLDLEDENLNLRERWKKNRLNREEMEGLRKAFKL
Sequences:
>Translated_149_residues MNCPFCNPSAEVILYEDGLIRILIDSYPASRGHLLVVPKRHVEHWEELTEEEKTALVNGIDLAMEGLKKALKPDAFNIGM NLGRAAGQTVPHLHMHVIPRWEGDCRHPRGGVRKAVLDLEDENLNLRERWKKNRLNREEMEGLRKAFKL >Mature_149_residues MNCPFCNPSAEVILYEDGLIRILIDSYPASRGHLLVVPKRHVEHWEELTEEEKTALVNGIDLAMEGLKKALKPDAFNIGM NLGRAAGQTVPHLHMHVIPRWEGDCRHPRGGVRKAVLDLEDENLNLRERWKKNRLNREEMEGLRKAFKL
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 17123; Mature: 17123
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCPFCNPSAEVILYEDGLIRILIDSYPASRGHLLVVPKRHVEHWEELTEEEKTALVNGI CCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH DLAMEGLKKALKPDAFNIGMNLGRAAGQTVPHLHMHVIPRWEGDCRHPRGGVRKAVLDLE HHHHHHHHHHHCCCCEECCCHHCHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCC DENLNLRERWKKNRLNREEMEGLRKAFKL CCCCCHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNCPFCNPSAEVILYEDGLIRILIDSYPASRGHLLVVPKRHVEHWEELTEEEKTALVNGI CCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH DLAMEGLKKALKPDAFNIGMNLGRAAGQTVPHLHMHVIPRWEGDCRHPRGGVRKAVLDLE HHHHHHHHHHHCCCCEECCCHHCHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCC DENLNLRERWKKNRLNREEMEGLRKAFKL CCCCCHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]