| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is iorA [H]
Identifier: 212223165
GI number: 212223165
Start: 21353
End: 23269
Strand: Reverse
Name: iorA [H]
Synonym: TON_0020
Alternate gene names: 212223165
Gene position: 23269-21353 (Counterclockwise)
Preceding gene: 212223166
Following gene: 212223162
Centisome position: 1.26
GC content: 55.87
Gene sequence:
>1917_bases ATGGTGGTCATCGTGGAGACGGTTAAGGCTTATCCTTCTGATTTAGTCAAGTCCAAAGCCAAGAAACGTGAGAAAAAGCT TCTCATGGGAAACGAGGCGATAGCCTACGGTGCCCTTGAATCGGGCGTCGTCTTCGCAACTGGTTACCCAGGAACCCCCT CAACCGAGGTCATCGAGACAATTGCCCATCTCAAGCCAGAAGTCTTCGCCGAGTGGGCGCCCAACGAAAAGGTTGCCCTT GAAGAGGCGGCGGGTGTTGCCTACACCGGCCTGAGGGCACTCGTCACGATGAAATGTGTTGGTCTCAACGTTGCAGCCGA TCCCCTTATGAGCCTCGCCTACTCCGGTGTTGAAGGGGGTCTTGTAATCCTCGTTGCGGATGACCCCGGCCCGCACACCA GCCAGACCGAGCAGGATGACAGATATTATGGAAAGCTCTCGCTTCTCCCAGTTCTTGAGCCCGCTGACCCGCAGGAGGCC CACGATTTAATCATCTACGCCTACGAGCTGAGTGAGCGCCATAAAGTCCCTGTCATCTTCAGGACGACGACGCGCGTGAA CCACACGACGGCCGATGTCGAGGTTGGAGACTTTGTGGAGCTGAACAGGGAGCCGAAGTTCAAGAAGGACATAGAGCGCT ATGTAAGGGCAAGCATGGATGGCAACAGGAAGAGGCATAAGTGGCTTAACGAAACGCTGAGAAAGATCGAGGAGGAGTTC AACTCGATGCCCTTCAACTGGGCCGAGGGAGAGGGAAGGATTGGAATAATCGTCGAAGGAGCACCCTACAACTACGTGAG GGAGGTTCTACCCAAGCTCGACGGTGACTTCAGGGTTCTCAAAATCTCAACGCCTCACCCGCTCCCCAGGAAGCTGGTCG TTGACTTCCTCAAAACGGTTGACTTCGCAATAGTCATTGAGGACGGCGCTCCCTTCCTCGAGGAGGAGGTTAAAATAGCG GCCTATGAGGCCGGCCTGAACGTGCCAATCTACGGCAAGAGAACTGGTCATCTGCCCCTTGAAGGTGAATTGAACCCGAG CCTGGTCAGGAACGCCCTGCTGAATCTCCTCGGCAGGAGAGCTGAAGAGTACACTAAGCCCGATGAGGTCGCTTACGCCG AGAGCCTTGCCCCGAAGAGGCCTCCGGTCATGTGCCCCGGCTGTCCACACAGAGGCTCATACAGGGCTGCCCTTGATGCC CTGAGAGACCTTAAGCTCGGCCGCTATTCGGTTCCCATACACGGTGACATAGGCTGCTACGCTCTATCGCTTCTCCCGCC GCTTGAGGCTATCTGGACCGAGTTCGTCATGGGCGCGAGCATAAGCCTCGCCAACGGCCAGAGCGTGGCAATGAAGAAGA AAATCATAGCGACGATCGGAGACTCTACCTTCTTCCACAATGGAATCCAGCCTCTGGTCGATGCAGTCTACAAGAACCTC GACGTTCTGGTGATGATACTCGACAACAGGACAACGGCAATGACCGGCCACCAGCCGCATCCAGGAACGGGGGGAAGTGA AACCGACAGGAAGTTCAACGAGATTGATATCGAGGCGCTCGTCAAGGCTCTGGGCGTCAAGTACGTCAAGACTGTTGATC CCTACGACCTCAAGGCGACGAGAGAAGCGATAAAGGAAGCGATGCAGGTTGAAGGGCCGGCCGTGATAATAGCCAGACGG GAGTGTGTTATTCCGGTCATAAGGCGCGGGGAGATCGGCGAGATACCACTCGTCGTCGAGGAGAAGTGCACTGGCTGCAA GGCGTGCATACTCCTGACGGGCTGTCCAGCTCTAGTCTACGACCCAGATACCAACAAGGTGAAAATCGACGAGCTCCTCT GTACCGGCTGTGGAGTCTGCAACCAGCTCTGTCCGTTCGACGCAATAAAGTTCCCGAGCGAGCTGGGAAAGAGCTAA
Upstream 100 bases:
>100_bases CGGAAAGGAGGAAAAAGGAGAAAAGTGACTTTCGAAAATTTTTCGATTTTTACAGGTACTTTTCTGAGCATAGAGTTTTA ACCCTCGGCACAGATAGCAT
Downstream 100 bases:
>100_bases TACCACCCGTACTTCCAGCCACTTTTCTTTCTCTTCTCGCTTTTTCTACTTCATCCGAAACAATCGCGTTGAAGAGCCAG AGTATATTAGCGTTAGGAAA
Product: indolepyruvate: ferredoxin oxidoreductase, alpha subunit
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MVVIVETVKAYPSDLVKSKAKKREKKLLMGNEAIAYGALESGVVFATGYPGTPSTEVIETIAHLKPEVFAEWAPNEKVAL EEAAGVAYTGLRALVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYYGKLSLLPVLEPADPQEA HDLIIYAYELSERHKVPVIFRTTTRVNHTTADVEVGDFVELNREPKFKKDIERYVRASMDGNRKRHKWLNETLRKIEEEF NSMPFNWAEGEGRIGIIVEGAPYNYVREVLPKLDGDFRVLKISTPHPLPRKLVVDFLKTVDFAIVIEDGAPFLEEEVKIA AYEAGLNVPIYGKRTGHLPLEGELNPSLVRNALLNLLGRRAEEYTKPDEVAYAESLAPKRPPVMCPGCPHRGSYRAALDA LRDLKLGRYSVPIHGDIGCYALSLLPPLEAIWTEFVMGASISLANGQSVAMKKKIIATIGDSTFFHNGIQPLVDAVYKNL DVLVMILDNRTTAMTGHQPHPGTGGSETDRKFNEIDIEALVKALGVKYVKTVDPYDLKATREAIKEAMQVEGPAVIIARR ECVIPVIRRGEIGEIPLVVEEKCTGCKACILLTGCPALVYDPDTNKVKIDELLCTGCGVCNQLCPFDAIKFPSELGKS
Sequences:
>Translated_638_residues MVVIVETVKAYPSDLVKSKAKKREKKLLMGNEAIAYGALESGVVFATGYPGTPSTEVIETIAHLKPEVFAEWAPNEKVAL EEAAGVAYTGLRALVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYYGKLSLLPVLEPADPQEA HDLIIYAYELSERHKVPVIFRTTTRVNHTTADVEVGDFVELNREPKFKKDIERYVRASMDGNRKRHKWLNETLRKIEEEF NSMPFNWAEGEGRIGIIVEGAPYNYVREVLPKLDGDFRVLKISTPHPLPRKLVVDFLKTVDFAIVIEDGAPFLEEEVKIA AYEAGLNVPIYGKRTGHLPLEGELNPSLVRNALLNLLGRRAEEYTKPDEVAYAESLAPKRPPVMCPGCPHRGSYRAALDA LRDLKLGRYSVPIHGDIGCYALSLLPPLEAIWTEFVMGASISLANGQSVAMKKKIIATIGDSTFFHNGIQPLVDAVYKNL DVLVMILDNRTTAMTGHQPHPGTGGSETDRKFNEIDIEALVKALGVKYVKTVDPYDLKATREAIKEAMQVEGPAVIIARR ECVIPVIRRGEIGEIPLVVEEKCTGCKACILLTGCPALVYDPDTNKVKIDELLCTGCGVCNQLCPFDAIKFPSELGKS >Mature_638_residues MVVIVETVKAYPSDLVKSKAKKREKKLLMGNEAIAYGALESGVVFATGYPGTPSTEVIETIAHLKPEVFAEWAPNEKVAL EEAAGVAYTGLRALVTMKCVGLNVAADPLMSLAYSGVEGGLVILVADDPGPHTSQTEQDDRYYGKLSLLPVLEPADPQEA HDLIIYAYELSERHKVPVIFRTTTRVNHTTADVEVGDFVELNREPKFKKDIERYVRASMDGNRKRHKWLNETLRKIEEEF NSMPFNWAEGEGRIGIIVEGAPYNYVREVLPKLDGDFRVLKISTPHPLPRKLVVDFLKTVDFAIVIEDGAPFLEEEVKIA AYEAGLNVPIYGKRTGHLPLEGELNPSLVRNALLNLLGRRAEEYTKPDEVAYAESLAPKRPPVMCPGCPHRGSYRAALDA LRDLKLGRYSVPIHGDIGCYALSLLPPLEAIWTEFVMGASISLANGQSVAMKKKIIATIGDSTFFHNGIQPLVDAVYKNL DVLVMILDNRTTAMTGHQPHPGTGGSETDRKFNEIDIEALVKALGVKYVKTVDPYDLKATREAIKEAMQVEGPAVIIARR ECVIPVIRRGEIGEIPLVVEEKCTGCKACILLTGCPALVYDPDTNKVKIDELLCTGCGVCNQLCPFDAIKFPSELGKS
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 [H]
Pfam domain/function: PF00037 Fer4; PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 70160; Mature: 70160
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVIVETVKAYPSDLVKSKAKKREKKLLMGNEAIAYGALESGVVFATGYPGTPSTEVIET CEEEEEHHHHCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCHHHHHHH IAHLKPEVFAEWAPNEKVALEEAAGVAYTGLRALVTMKCVGLNVAADPLMSLAYSGVEGG HHHCCHHHHHCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC LVILVADDPGPHTSQTEQDDRYYGKLSLLPVLEPADPQEAHDLIIYAYELSERHKVPVIF EEEEEECCCCCCCCCCCCCCHHCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEE RTTTRVNHTTADVEVGDFVELNREPKFKKDIERYVRASMDGNRKRHKWLNETLRKIEEEF EECCCCCCEECCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH NSMPFNWAEGEGRIGIIVEGAPYNYVREVLPKLDGDFRVLKISTPHPLPRKLVVDFLKTV CCCCCEEECCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHC DFAIVIEDGAPFLEEEVKIAAYEAGLNVPIYGKRTGHLPLEGELNPSLVRNALLNLLGRR CEEEEEECCCCHHHHHHEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH AEEYTKPDEVAYAESLAPKRPPVMCPGCPHRGSYRAALDALRDLKLGRYSVPIHGDIGCY HHHCCCCHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEECCEECCHHHH ALSLLPPLEAIWTEFVMGASISLANGQSVAMKKKIIATIGDSTFFHNGIQPLVDAVYKNL HHHHCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHEECCCHHHHCCHHHHHHHHHCCC DVLVMILDNRTTAMTGHQPHPGTGGSETDRKFNEIDIEALVKALGVKYVKTVDPYDLKAT EEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCHHEECCCCCCHHHH REAIKEAMQVEGPAVIIARRECVIPVIRRGEIGEIPLVVEEKCTGCKACILLTGCPALVY HHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCEEECCCCCCCEEEEEEECCCEEEE DPDTNKVKIDELLCTGCGVCNQLCPFDAIKFPSELGKS CCCCCEEEHHHHHHHHHHHHHHCCCCHHHCCCHHHCCC >Mature Secondary Structure MVVIVETVKAYPSDLVKSKAKKREKKLLMGNEAIAYGALESGVVFATGYPGTPSTEVIET CEEEEEHHHHCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCHHHHHHH IAHLKPEVFAEWAPNEKVALEEAAGVAYTGLRALVTMKCVGLNVAADPLMSLAYSGVEGG HHHCCHHHHHCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC LVILVADDPGPHTSQTEQDDRYYGKLSLLPVLEPADPQEAHDLIIYAYELSERHKVPVIF EEEEEECCCCCCCCCCCCCCHHCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEE RTTTRVNHTTADVEVGDFVELNREPKFKKDIERYVRASMDGNRKRHKWLNETLRKIEEEF EECCCCCCEECCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH NSMPFNWAEGEGRIGIIVEGAPYNYVREVLPKLDGDFRVLKISTPHPLPRKLVVDFLKTV CCCCCEEECCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHC DFAIVIEDGAPFLEEEVKIAAYEAGLNVPIYGKRTGHLPLEGELNPSLVRNALLNLLGRR CEEEEEECCCCHHHHHHEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH AEEYTKPDEVAYAESLAPKRPPVMCPGCPHRGSYRAALDALRDLKLGRYSVPIHGDIGCY HHHCCCCHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCEECCEECCHHHH ALSLLPPLEAIWTEFVMGASISLANGQSVAMKKKIIATIGDSTFFHNGIQPLVDAVYKNL HHHHCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHEECCCHHHHCCHHHHHHHHHCCC DVLVMILDNRTTAMTGHQPHPGTGGSETDRKFNEIDIEALVKALGVKYVKTVDPYDLKAT EEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCHHEECCCCCCHHHH REAIKEAMQVEGPAVIIARRECVIPVIRRGEIGEIPLVVEEKCTGCKACILLTGCPALVY HHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCEEECCCCCCCEEEEEEECCCEEEE DPDTNKVKIDELLCTGCGVCNQLCPFDAIKFPSELGKS CCCCCEEEHHHHHHHHHHHHHHCCCCHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]