Click here to switch to the map view.

The map label for this gene is mfd

Identifier: 209964568

GI number:

Start: 1313638

End: 1317267

Strand: Reverse

Name: mfd

Synonym: RC1_1262

Alternate gene names: NA

Gene position: NA

Preceding gene: 209964569

Following gene: 209964566

Centisome position: NA

GC content: NA

Gene sequence:

>3630_bases
ATGACTGTCCTCCTGCCCGATCTGAAGCCCGGAACGCCCCGCCGCGTCCTCATCGCCGGGGCGCCGGAGGGGCACGACGC
GCGCCTTCTGGCGGGGCTGGCGCGGGCCGCCGGTGCGGCGGGCCTGCTGCATGTGGCGACGGACGATGCCCGCGCCGCCC
GGCTGGCGGAGGCGGTGTCCTTCTTCGATCCGGGCATCGAGGTGATCCTCTTCCCGGCCTGGGACTGTCTGCCCTACGAC
CGGGTGTCGCCGAACGGCGACATCGTGGCCCGCCGCATCGACGCCCTGACCCGGCTCCTGGAACCGGCGGCGAAGGACCG
GGCGCTGCTGCTCGTCACCACGGTGAACGCGGCGCTGCACAAGGTCCCGCCGCGGCTGGCCTTCCGCAACGCCAGCTTCC
GGGCCAGGGTGGGCGACCGCATCAACCTGCCCGAACTCCAGCGTTTCCTGGCCAACAACGGCTACACGAAGGCGCAGACG
GTGCGCGAACCGGGCGAGTTCGCCGTCCGCGGCGGCATCGTCGATCTGTTCCCGCCGGGCACGGCGGAGCCGCTGCGGCT
GGACCTGTTCGGCGACGATCTCGACGGCGTCCGTGCCTTCGACCCCATGACCCAGCTCACCACCGAGAAGCGCGACGGCT
TCGTGCTGAAGCCGATGTCGGAGGTGTTCCTGGACGAGATGTCGATCTCCCGCTTCCGCACCGGCTACCGCGAGCTGTTC
GGGGCGGTGACGGGTGACGACCCGCTGTATGAGGCGGTCAGCGCCGGGCGCAAGTACGCCGGCATGGAGCACTGGCTGCC
GCTGTTCCACAGTGGACTGGAGACGCTGTTCGACTACATGCCGGACGCGCCCGTCACCCTCGACCCTCATGTGGAGGAGG
CGCGCGACCAGCGGCTGGAACAGGTGCGCGACTTCTTCGAGGCGCGCCGCACCTTGCAGGAGGCGGAGAAGAAATCCGGC
AACCCGGTCTACCGGCCGGTGCCGCCGGGCATGACGGTGCTCGATGCGGAAGGCTGGGACCTCCACCTCGCCGTGCGGCC
GGTGGCGCAGCTCACCCCCTTCGCCGCGGCGGAGGCCGGGAGCAATCCCGACCTGACGGACGCCGGCGGCCGCAAGGGCC
GCGACTTCGCCGATGCCCGCGTCCAGTCCGGCGTCAATGTCTACGACGTGCTGCGCGAGCACGTCGGCGCGCTGCTGGCG
GACGGGCGGCGCGTCGTCGTCGCCGGCTACTCCACCGGCGCCCGCGACCGCCTGCGCTCCGTGCTGAAGGAGCACGGCAT
CGAGCGGGTGAAGGCGGTCGAAAGCTGGGCGGAGGTGGAGGGGCTGCCCCGCACTACCACGGCGCTGGTGGTGCTGGCGC
TGGATCACGGCTTCACCGCCCCCGGTCTTGCCGTCATCACCGAACAGGACATCCTGGGCGACCGGCTGGTCCGTGCCGGC
GGTCGCAAGAAGCGCCGCGCCGCGAACTTCATCGCCGAGGCGTCCGGCCTCAACCCCGGCGACCTCGTCGTCCACATCGA
CCACGGCATCGGCCGCTATGACGGGCTGGAGACGCTGGACGTGGGCGGTGCGCCGCACGACTGCCTGCGCCTGGTCTACG
AGGGCGGGGACAAGCTCTACGTCCCGGTGGAGAACATCGAGGTCCTGTCCCGCTACGGCTCCGAGGACTCGGCCGGCCAG
CTCGACCGGCTGGGCGGTGCGGGCTGGCAGTCGCGCAAGGCCCGGGTCAAGAAGCGGCTGAAGGACATGGCGGCCGCCCT
CCTGCGCATCGCGGCCGAGCGGGCCCTGCGCACGGCCCCGCCGGTCGCCGTGCCGGACGGCGCCTGGGACGAGTTCTGCG
CCCGCTTCCCCTATGCCGAGACGGACGACCAGCTCCACGCCATCGAGGACGTGCTGGGCGATCTCTCGTCCGGCCGGCCG
ATGGACCGGCTGGTCTGCGGCGATGTCGGCTTCGGCAAGACGGAGGTGGCCCTGCGCGCCGCCTTCCTGGCGGTGATGAA
CGGCATGCAGGTGGCGGTGGTGGTGCCGACCACCCTGCTGGCACGCCAGCATTACCGCACCTTCGAGCAGCGTTTCGCCG
GGCTGCCGGTGCGGCTGGGCCAGCTCTCCCGCCTCGCCACGGCGAAGGAGACGGCGCAGACCAAGGCCGGGCTGGCCGAC
GGCACGGTGGACATCGTCGTCGGCACCCATGCGCTGCTGTCGAAGAGCGTGGACTTCAAGCGCCTGGGCATGGTCATCGT
GGACGAGGAGCAGCATTTCGGCGTGAAGCAGAAGGAGCGGCTGAAGGAGCTGCGGGCGGACATCCATGTCCTGACCCTGA
CGGCGACGCCGATCCCGCGCACGCTCCAGCTCGCCCTGTCCGGGGTGCGCGAGCTGTCGCTGATCGCCACGCCGCCGGTG
GACCGGCTCGCGGTGCGGACCTTCGTGCTGCCCTACGACCCGGTGGTGATCCGCGAGGCGATCCTGCGCGAGCACTACCG
TGGCGGCCAGAGCTTCTATGTCTGCCCCCGCATCGAGGATCTGGAGCGGGTCCGCCTCCAGCTTGAGGAGCTGGTTCCGG
AGGTCAAGGTGGTGGTGGCCCACGGCCAGATGCCGGCCAGCCAGCTTGAGGAGGTGATGACCGCCTTCGACGAGCACAAG
TACGACGTGCTGCTGGCCACCAACATCATCGAGAGCGGCCTCGACATCCCTTCGGCCAATACGCTGGTGGTCCACCGCGC
CGACCTGTTCGGCCTCGCCCAGCTCTACCAGGTGCGCGGGCGCGTCGGCCGGGCCAAGGTGCGCGGTTACGCCTACCTGA
CCTACCAGCCGCGGACCGTGCTGTCGGCCACGGCGCAGCAGCGCCTGCATGTGATCGAGACGCTGGACAGCCTCGGTGCC
GGCTTCCAGCTCGCCAGCCACGACATGGACATCCGCGGCGCCGGCAACCTGCTGGGCGAGGAGCAGTCCGGCCATATCCG
CGAGGTCGGCGTCGAACTCTACCAGCAGATGCTGGAGGAGGCGGTGGCCGACGCCCGCAGCGGCCGCGGGGCCGAGCAGG
CGGCGGAGGATTCCTGGTCGCCGCAGATCAATCTGGGCATGCCGGTGCTGATCCCGGAGAGCTATGTGCCGGACCTGAAT
GTCCGGCTGACGCTCTACCGCCGCGTCTCCGACCTGACCGACCGGCAGGAGATCGACGCCTTCGCGGCCGAACTGATCGA
CCGCTTCGGCCCGCTCCCGGAGGAGGTGGACAATCTCCTGCGGCTGGTCGAGATCAAGCGGCTCTGCAAGGAGGCCGGCG
TGGCGAACCTCGACGCCGGTCCCAAGGGCGCCGTCGTCGGTTTCCGCAACAACAGCTTCCGCAATCCGGCGCGGCTGGTG
GATTTCATGCAGAAGCAGGCCGGCACGGCGAAGCTGCGGCCCGATCACAAGCTGGTTCTGCTGCGCCCCTGGGACAGCCC
GGAAAGCCGCATGGCCGGCGTCCGCCAGCTCATGCTCAGCCTCGCCCAGATGGCGGCGGGGGAGGCCCTGACGGAGCCGC
TGGCCCCGCCGCCGCCTCCACCCCCGCCGCCGCCCGCGCCGAAGGCGCCGGCGCGCAAGGCCATCGTGATGGGCAGGAAC
ACGGCTCCCTGGCGGCCGCGGGGGCGCTGA

Upstream 100 bases:

>100_bases
GGTCCCGTCGGGGCCCTGGTCGCCCGCATCCGCGCCTTCCGCTTCCGGCCGGAAGTCTGATAGGTTCCCCTTCCGTTCCG
CTCATGGGTTCCGTGCCGCG

Downstream 100 bases:

>100_bases
CGCCTCAGCCCGTCAGCCCCAGGGTCCTGCCATCCGTCGCCATTCCGCCGGTCGCGGGGCTGGAGGCGGCCGGGCCGGCA
TCCACGGCGGCAAGGTCCAG

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1209_residues
MTVLLPDLKPGTPRRVLIAGAPEGHDARLLAGLARAAGAAGLLHVATDDARAARLAEAVSFFDPGIEVILFPAWDCLPYD
RVSPNGDIVARRIDALTRLLEPAAKDRALLLVTTVNAALHKVPPRLAFRNASFRARVGDRINLPELQRFLANNGYTKAQT
VREPGEFAVRGGIVDLFPPGTAEPLRLDLFGDDLDGVRAFDPMTQLTTEKRDGFVLKPMSEVFLDEMSISRFRTGYRELF
GAVTGDDPLYEAVSAGRKYAGMEHWLPLFHSGLETLFDYMPDAPVTLDPHVEEARDQRLEQVRDFFEARRTLQEAEKKSG
NPVYRPVPPGMTVLDAEGWDLHLAVRPVAQLTPFAAAEAGSNPDLTDAGGRKGRDFADARVQSGVNVYDVLREHVGALLA
DGRRVVVAGYSTGARDRLRSVLKEHGIERVKAVESWAEVEGLPRTTTALVVLALDHGFTAPGLAVITEQDILGDRLVRAG
GRKKRRAANFIAEASGLNPGDLVVHIDHGIGRYDGLETLDVGGAPHDCLRLVYEGGDKLYVPVENIEVLSRYGSEDSAGQ
LDRLGGAGWQSRKARVKKRLKDMAAALLRIAAERALRTAPPVAVPDGAWDEFCARFPYAETDDQLHAIEDVLGDLSSGRP
MDRLVCGDVGFGKTEVALRAAFLAVMNGMQVAVVVPTTLLARQHYRTFEQRFAGLPVRLGQLSRLATAKETAQTKAGLAD
GTVDIVVGTHALLSKSVDFKRLGMVIVDEEQHFGVKQKERLKELRADIHVLTLTATPIPRTLQLALSGVRELSLIATPPV
DRLAVRTFVLPYDPVVIREAILREHYRGGQSFYVCPRIEDLERVRLQLEELVPEVKVVVAHGQMPASQLEEVMTAFDEHK
YDVLLATNIIESGLDIPSANTLVVHRADLFGLAQLYQVRGRVGRAKVRGYAYLTYQPRTVLSATAQQRLHVIETLDSLGA
GFQLASHDMDIRGAGNLLGEEQSGHIREVGVELYQQMLEEAVADARSGRGAEQAAEDSWSPQINLGMPVLIPESYVPDLN
VRLTLYRRVSDLTDRQEIDAFAAELIDRFGPLPEEVDNLLRLVEIKRLCKEAGVANLDAGPKGAVVGFRNNSFRNPARLV
DFMQKQAGTAKLRPDHKLVLLRPWDSPESRMAGVRQLMLSLAQMAAGEALTEPLAPPPPPPPPPPAPKAPARKAIVMGRN
TAPWRPRGR

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA