Definition Oligotropha carboxidovorans OM5, complete genome.
Accession NC_011386
Length 3,745,629

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Identifier: 209885543

GI number:

Start: 2362335

End: 2363543

Strand: Reverse

Name: Not Available

Synonym: OCAR_6422

Alternate gene names: NA

Gene position: NA

Preceding gene: 209885544

Following gene: 209885542

Centisome position: NA

GC content: NA

Gene sequence:

>1209_bases
ATGACCGACCTACCTAATCCGCCTCCCGGCGATATCCGTGCCGAGCTGCGCTTGCGGCCCGAACAGCCGCGCGTCACGCG
CCTGTCGCGCAAGGTGCTCATCACGCTCGGCAGCGTCAGCGCCGTCGCCATCATGGCCGCGCTGTTCTGGGCGCTCGATG
CCAACCGCCGCGCCAACCAATCGCCGACCGAACTCTACAGCACCGAGAACCGCACGCCGGCGGACGGACTCGCCGGCTTG
CCGAAGGACTACACCGGCATTCCCAAGCTCGGCCCGGCGCTGCCGGGCGACCTGGGGCGTCCGATCGTGAGTGCGCAGGA
TGAAGGCAAACCCGTCGTCGCGCCGGATATCCGCACGCCGCGCGCCGATCCGACCGAACAACGTCGTCTCGCCGAGATCG
AAGCCGCACGCGTCGCCAAGGTCTTCACCGACAGCCGCGGCGTGCAGGCGACGGTCGCATCTGCGCCCGCGATTGGCCGC
GTCGATCCGGCGGCGGGTCTCACGCTGCCGGCCGAAACGCCGCCGCTCGATCCGGGTGCGGCGCAGAACATGCAGGACCG
CAAGCTCGCCTTCGTCAATGCCGCCGTCGATCGGCGCACCGTCACGCCTGATCGCGTGCAGGAGAAGGCGTCGCCCTATG
TCGTGCAGGCCGGCACCGTCATCCCCGCTGCGCTGATTACCGGCATCAAATCCAATCTGCCCGGTACGATCACCGCGCAG
GTGACGGAGCAGGTTTACGATACACCGACCGGCAAGCAGCTTCTCATCCCACAAGGCGCACGGCTGATCGGTCAGTACGA
CAGTCAGGTCGCGTTCGGGCAGTCGCGCGTGCTGCTGGTCTGGAATCGCATCATCATGCCGAACGGCACGTCGATCGTGT
TGGAGCGGCAGCCCGGTGCCGACGCCGAAGGTTATTCCGGGCTCGAGGACGACGTCGACTATCATTGGGGTCAGCTCTTC
AAGGCGGCGTTGTTGTCGACGCTGCTCAGCGTCGGCTCGGAGGCAGGCTATTCGGGCAATGAGAGCGATATTGCCCGAGC
GTTACGGCAAGGCACGTCGAACAGCACCAGCCAGATCGGTCGGCAAATCGTCGGCCGTCAGCTCAACATTCAGCCGACGC
TCACTATACGGCCGGGATTCCCCGTCCGCGTGATCGTCAATCGTGACCTCATATTGCAGCCCTATGGAGCGGCGAAGGAG
CCGTCATGA

Upstream 100 bases:

>100_bases
TCGCCGCGGCCGAACTGCGCCTGGGCGACAAGGACAGCGAGAAGCGCGTGCGCATCGTGCGCACCGACGGCCGGCCGGGG
CGTGGCCTGAGGTTGTTCTG

Downstream 100 bases:

>100_bases
CCAAGTTGAAGCTGGAGACCATCGAGGATGACAAGCCGGTCAATCGCATGGTCAAATTCCCAGGCGCTATTTACCGGGAC
CTGACCGCTTACGCCGAGGT

Product: conjugal transfer protein TrbI

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>402_residues
MTDLPNPPPGDIRAELRLRPEQPRVTRLSRKVLITLGSVSAVAIMAALFWALDANRRANQSPTELYSTENRTPADGLAGL
PKDYTGIPKLGPALPGDLGRPIVSAQDEGKPVVAPDIRTPRADPTEQRRLAEIEAARVAKVFTDSRGVQATVASAPAIGR
VDPAAGLTLPAETPPLDPGAAQNMQDRKLAFVNAAVDRRTVTPDRVQEKASPYVVQAGTVIPAALITGIKSNLPGTITAQ
VTEQVYDTPTGKQLLIPQGARLIGQYDSQVAFGQSRVLLVWNRIIMPNGTSIVLERQPGADAEGYSGLEDDVDYHWGQLF
KAALLSTLLSVGSEAGYSGNESDIARALRQGTSNSTSQIGRQIVGRQLNIQPTLTIRPGFPVRVIVNRDLILQPYGAAKE
PS

Sequences:
NA

Specific function: NA

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA