| Definition | Oligotropha carboxidovorans OM5, complete genome. |
|---|---|
| Accession | NC_011386 |
| Length | 3,745,629 |
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Identifier: 209884917
GI number:
Start: 1708565
End: 1711306
Strand: Reverse
Name: Not Available
Synonym: OCAR_5783
Alternate gene names: NA
Gene position: NA
Preceding gene: 209884919
Following gene: 209884916
Centisome position: NA
GC content: NA
Gene sequence:
>2742_bases ATGAATCTCGTCATTGTGGAGTCGCCTGCGAAGGCCAAGACGATCAATAAGTACCTGGGCTCCTCCTACGAGGTTCTGGC CTCCTACGGCCATGTCCGCGACCTGCCGGCCAAGAACGGATCGGTCGACCCGGACGCCAATTTCCAGATGATCTGGGAGA CAGACCCCAAGGCGGCGAGCCGGCTCAACGATATCGCCAAGGCGCTCAAGGGCGCGGACAAACTGATCCTCGCAACCGAC CCTGATCGCGAGGGCGAGGCGATCTCCTGGCATGTTCTGGAGGTGATGAAGCAGAAGCGCGCGCTGAAGGATCAGAAGGT CGAGCGCGTCGTCTTCAACGCCATCACCAAGCAGTCTGTCACCGAGGCGATGAACAACCCCCGCCAGATCGATGGCGCGC TGGTCGATGCCTATATGGCCCGCCGCGCGCTCGACTATCTCGTCGGCTTCACGCTATCCCCGGTGCTGTGGCGCAAGCTG CCGGGCGCGCGCTCGGCCGGCCGCGTGCAGTCGGTGGCGCTCCGCCTCGTCTGCGACCGCGAGATCGAGATCGAGAAATT CGTCGCCCGTGAATACTGGTCGCTGGTGGCGACGCTCGCCACGCCGCGCAACGACACCTTCGAGGCGCGGCTCGTCGGCG CCGACGGTAAGAAAATCCAGCGCCTCGACATTGGCACCGGCGCGGAAGCCGAAGACTTCAAGAAGGCGCTGGAGACGGCT GCCTTCACCGTCTCGCTGGTGGAAGCGAAGCCCGCGCGGCGCAATCCGCAGGCGCCCTTCACCACTTCGACGCTGCAGCA GGAAGCAAGCCGCAAGCTCGGCTTTGCGCCCTCGCACACCATGCGGATCGCCCAGCGCCTTTATGAGGGCATCGACATCG GCGGCGAGACCACCGGTCTCATCACCTATATGCGAACCGACGGCGTCTCGATCGCGCCCGAGGCCATTCCGGCGCTGCGC AAGGTGATCGCCGAGGAGTATGGCAGCAATTACGTGCCGAGCGCGCCGCGCCAGTACACCTCCAAGGCGAAAAACGCGCA GGAAGCGCACGAAGCGATCCGCCCGACCGACGTCTCGCGCCGCCCGGCCAAGCTGAAGGCGCGGCTCGATAACGATCAGT ATCGTCTCTACGAATTGATCTGGATGCGCGCGATCGCGAGCCAGATGGAATCCGCTGAACTCGAGCGCACCACCGTCGAC ATCACCGCGAAGGCTGGTGCGCGCACGCTTGAACTGCGCGCCTCCGGTCAGGTCGTGAAGTTCGACGGCTTTCTTGCAGT CTATCAGGAAGGCCGCGATGACGACCCGGAAGACGAAGAAAGCCGCCGCCTGCCCGCGATGAGCGAGGGCGAGGCGCTGA AGCGCGAAAGCCTCGCGGTGACGCAGCACTTCACAGAGCCGCCGCCGCGCTACTCCGAAGCCTCGCTCGTCAAGCGCATG GAAGAGCTCGGCATCGGCCGGCCTTCGACCTACGCGTCGATCCTGCAGGTGTTGAAGGATCGCGGCTACGTCAAGCTCGA GAAGAAACGCCTCTCCGCCGAGGACAAGGGCCGCGTCGTTGTCGCGTTCCTGCAGAAGTTTTTTGCGCGCTACGTCGAGT TCGATTTCACCGCCGATCTCGAAGAGCAGCTCGACAAGATTTCCAACAACGAAGTCGCCTGGAAGAACGTGCTCTCGGAC TTCTGGCGCGATTTCATCGGCGCCGTCGACGAGATCAAGGACGTCAAGGTCAGCGAAGTTCTCGACGTGCTCGACGCCAT GCTCGGTGAGCACATCTACGAGCCGCGCGCCGATGGCGGCGATCCGCGCCAGTGCCCGAGTTGCGGCACCGGTCGGCTCA ACCTCAAGGCCGGCAAGTTCGGCGCCTTCGTCGGCTGCTCGAACTATCCCGAGTGCCGCTACACTCGTCCGCTCGCTGCT TCCAGCGGCACAAGCGACCGTGTGCTCGGCAAGGATCCGAAGACCAACCTCGACGTTGCGGTGAAAGCCGGACGGTTTGG CCCCTACATCCAACTCGGCGAGCCCAATGATTACGCTGAGGGCGAGAAGCCCAAGCGCGCGGGCATTCCGAAGAACATGT CGCCTGCCGACGTTGAGCTCGATCTCGCGATCAAGCTATTGTCGCTGCCGCGCGATGTGGGTCCTCACCCCGAGGATGGC GAGATCATCACCGCGGGCATCGGCCGCTTCGGCCCGTTCGTGCGCCACGGCAAGACCTATGCGAGCCTCGAAGCTGGCGA TGACGTCTACACGATCGGTCTCAATCGCGCGGTGACGCTGATTGCCGAGAAGATCGCCAAGGGCCCGAGCCGCCGCTTCG GTGCCGACCCCGGCAAGGAAGTCGGCGACTATCCGGCGCGCGGCGGCAAGATCATGCTCAAGAAGGGCCGCTACGGCGCG TACGTCACGATCGACGGCATCAATGCCACGATCCCCGACGACAAGGAGCCTGACCAGATCACCCTTGAAGAGGCGATCGC GCTGATCGAGGCTCGCGCCGCAAAGGGCGGCAAGGCCAAGCGTGCGCCGAAGAAGGCCGCGGCGAAGAAAGCCGCGCCCA AGAAAAAGGCCACCGCCAAAAAGAAAGCCGACAGCGAGCCTGAGAGCGGCGCGAAACCTGCCAAGAAGGCAGCCACACGC ACGGCGCCCAAGGCCCGCACCAGCACCGCGAAACCTGCGGCCAAAACGGCTGCGAAGGCCAAGCCCACGGCGAAGAAGAG CGCCGGAAAAGCACGCGGATAA
Upstream 100 bases:
>100_bases ATTTGACAGCATCCCCCAGTTTACCCATGTATCGCTCCGAAAGCCTCGGCCCTTCGCGGTGATTCCGAGGCTTATTTTCA GCCTAACTCATTGGATTCAA
Downstream 100 bases:
>100_bases TGAAAAAGCAGCATGACGCGAACGATGATTTTCCCGACAGGGAGAGTATCGTCGCGTTCATCAGAGAGCATCCTGGCGAG GCCAACACGCGCGAACTCGC
Product: DNA topoisomerase I
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>913_residues MNLVIVESPAKAKTINKYLGSSYEVLASYGHVRDLPAKNGSVDPDANFQMIWETDPKAASRLNDIAKALKGADKLILATD PDREGEAISWHVLEVMKQKRALKDQKVERVVFNAITKQSVTEAMNNPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKL PGARSAGRVQSVALRLVCDREIEIEKFVAREYWSLVATLATPRNDTFEARLVGADGKKIQRLDIGTGAEAEDFKKALETA AFTVSLVEAKPARRNPQAPFTTSTLQQEASRKLGFAPSHTMRIAQRLYEGIDIGGETTGLITYMRTDGVSIAPEAIPALR KVIAEEYGSNYVPSAPRQYTSKAKNAQEAHEAIRPTDVSRRPAKLKARLDNDQYRLYELIWMRAIASQMESAELERTTVD ITAKAGARTLELRASGQVVKFDGFLAVYQEGRDDDPEDEESRRLPAMSEGEALKRESLAVTQHFTEPPPRYSEASLVKRM EELGIGRPSTYASILQVLKDRGYVKLEKKRLSAEDKGRVVVAFLQKFFARYVEFDFTADLEEQLDKISNNEVAWKNVLSD FWRDFIGAVDEIKDVKVSEVLDVLDAMLGEHIYEPRADGGDPRQCPSCGTGRLNLKAGKFGAFVGCSNYPECRYTRPLAA SSGTSDRVLGKDPKTNLDVAVKAGRFGPYIQLGEPNDYAEGEKPKRAGIPKNMSPADVELDLAIKLLSLPRDVGPHPEDG EIITAGIGRFGPFVRHGKTYASLEAGDDVYTIGLNRAVTLIAEKIAKGPSRRFGADPGKEVGDYPARGGKIMLKKGRYGA YVTIDGINATIPDDKEPDQITLEEAIALIEARAAKGGKAKRAPKKAAAKKAAPKKKATAKKKADSEPESGAKPAKKAATR TAPKARTSTAKPAAKTAAKAKPTAKKSAGKARG
Sequences:
NA
Specific function: NA
COG id: COG0550
COG function: function code L; Topoisomerase IA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA