| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is tatA
Identifier: 209696393
GI number: 209696393
Start: 3249570
End: 3249818
Strand: Direct
Name: tatA
Synonym: VSAL_I2999
Alternate gene names: 209696393
Gene position: 3249570-3249818 (Clockwise)
Preceding gene: 209696392
Following gene: 209696394
Centisome position: 97.73
GC content: 37.35
Gene sequence:
>249_bases ATGGGTGGTATTAGTATTTGGCAACTTCTTATAATTGCAGTAATTATCGTTCTGTTATTTGGTACGAAAAAATTACGCGG TGTAGGCAGTGATTTGGGTTCTGCTGTTAAAGGCTTTAAAAAAGCGATAAGTGAAGATGAATCAGCGAAAGACGCGAAGA AAGACGCGGATTTTGTTCCTCAGAACTTAGAGAAAAAAGAAGCAGAAACAGTAGAAAAACAAAAGCAAAACGACAAAGAG CAGGCATAA
Upstream 100 bases:
>100_bases ACAGGTGTCACGTTTTGGCTATTAAGCTGGCGAGCATATCGTTAATAAGCGTTACTCTATTTAGCAATTTTTTAACCCCT AACACGCTGAGGAAATAAGC
Downstream 100 bases:
>100_bases TTCGTGTTTGATATCGGTTTTTGGGAACTGATACTGATCTCTGTTGTTGGGCTAGTGGTACTAGGACCGGAACGTTTACC AAAAGCGATCCGATCAGTAG
Product: twin arginine translocase protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MGGISIWQLLIIAVIIVLLFGTKKLRGVGSDLGSAVKGFKKAISEDESAKDAKKDADFVPQNLEKKEAETVEKQKQNDKE QA
Sequences:
>Translated_82_residues MGGISIWQLLIIAVIIVLLFGTKKLRGVGSDLGSAVKGFKKAISEDESAKDAKKDADFVPQNLEKKEAETVEKQKQNDKE QA >Mature_81_residues GGISIWQLLIIAVIIVLLFGTKKLRGVGSDLGSAVKGFKKAISEDESAKDAKKDADFVPQNLEKKEAETVEKQKQNDKEQ A
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=88, Percent_Identity=59.0909090909091, Blast_Score=100, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_ALISL (B6EHA7)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002264324.1 - GeneID: 6989348 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I2999 - HOGENOM: HBG751935 - OMA: DEPAKDA - ProtClustDB: PRK04598 - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 8944; Mature: 8813
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x22fab13c)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGISIWQLLIIAVIIVLLFGTKKLRGVGSDLGSAVKGFKKAISEDESAKDAKKDADFVP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC QNLEKKEAETVEKQKQNDKEQA CHHHHHHHHHHHHHHHCCCCCH >Mature Secondary Structure GGISIWQLLIIAVIIVLLFGTKKLRGVGSDLGSAVKGFKKAISEDESAKDAKKDADFVP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC QNLEKKEAETVEKQKQNDKEQA CHHHHHHHHHHHHHHHCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA