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The map label for this gene is yuxH [H]

Identifier: 209696328

GI number: 209696328

Start: 3175273

End: 3176493

Strand: Reverse

Name: yuxH [H]

Synonym: VSAL_I2930

Alternate gene names: 209696328

Gene position: 3176493-3175273 (Counterclockwise)

Preceding gene: 209696331

Following gene: 209696323

Centisome position: 95.53

GC content: 37.18

Gene sequence:

>1221_bases
ATGTATGCATACGTTGCTCGACAACCGATACTTAATCGAAAAAAACAAACGATAGGGTATGAACTCCTTTTTCGTGATGG
TGAAAGCAACGCTTTTCCTGATGATATAGAAGCGAATCAAGCGACTTGCCGATTGTTGGTCGAGAACTTTATGTCGGTCG
GCTGTAATCCTGCTTTAGAATCTCCTCGTAGTTTTATCAATTTCCCGCAAGAATCATTGATTTCTCTTATACCTACGTCA
TTTCCGAAACGGAAAATTGTAGTAGAAGTATTAGAGACGTGCATTCCTAATGATGAATTATTCAGTGCGATTAAACATTT
ACACCGCATGGGCTATATCATTGCATTAGATGATTTTAGTTTAGATGCGGTGTGGGATCGTTTTTTACCTTATGCACATA
TCGTGAAATTAGACATCATGCAATTGGGTATCAATGTTGCTTGTGACTATGTGAAGAAAAAGAAACGAGAAGGCTGTAAA
CGTCATTATTTAGCGGAGCGTGTTGAAACAAATGAAGAGTTTCAGCAAGCATTTGATGCCGGTTTTTATTTCTATCAAGG
GTATTTCTTTAGTAAACCTGAAATCATAAAAAATCGAGTGGTTAAACCTGAAGAAGTATTAACGATGCAATTGTTTCAAG
AAGTGTGTCGTGATGACGTTAATTTCAATCGTATTGAGCAGCTTATTGCTCAAGATGTGTCGTTGTCTTATCAGTTATTA
AAATTCGTCAATACGTCAGCCGTTCGTTTAGAAAAACCGATTTCGTCTTTTAAACAAGCGTTAGTGTATTTGGGTGAAGA
ACAAATCAAAATGTTTGTCACTTTAGTCGCGACAGCTCACGCGGCAATCAATAAGCCCAAAGAATTGTATAAACAATCGC
TGATTAAAGGGCGTTTTTGTGAATTAATGATTTGTAAGTGCCAGAATGGGACGCAGGGACAACAGGCGTTTATTGTGGGA
TTGTTTTCGTTATTAGACGCGTTGTTGGATCGTAATTTTGATGAATTACTGGTTCAATTGTCTTTATCTGAAGATATTGA
GCAAGCCTTATTAACACAATCAGGTCTGCTTGGTTCTATGTTAAAGCTGTATGAAAATGTAGATAAAGGAGATTGGACTC
ATATTGATCAAGTCAGTCGCTCTTTGGGTTTCTCTGCAAAAACGGTTGAAAAAACTTACGAAGAAGCTGAAAAATGGTAT
CAAGACATCCTTTCTAAATGA

Upstream 100 bases:

>100_bases
AGGACTAGGTTTCTTTTAGGTTTTTATCAAGTTTTTTGGTATTCTGCCGTTATAAATACTTAATCTTATTTTGTTTCTCA
CAGGATACCGCTTTCAAATT

Downstream 100 bases:

>100_bases
TCAAAAAGCTCTATTTCTTGAAAGGAATAGAGCTTAATATTGATGGCCTACCGCATTATCACTGACAATAATTGATTAAA
TCGACTTTATCAGAAAAGAG

Product: signaling protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MYAYVARQPILNRKKQTIGYELLFRDGESNAFPDDIEANQATCRLLVENFMSVGCNPALESPRSFINFPQESLISLIPTS
FPKRKIVVEVLETCIPNDELFSAIKHLHRMGYIIALDDFSLDAVWDRFLPYAHIVKLDIMQLGINVACDYVKKKKREGCK
RHYLAERVETNEEFQQAFDAGFYFYQGYFFSKPEIIKNRVVKPEEVLTMQLFQEVCRDDVNFNRIEQLIAQDVSLSYQLL
KFVNTSAVRLEKPISSFKQALVYLGEEQIKMFVTLVATAHAAINKPKELYKQSLIKGRFCELMICKCQNGTQGQQAFIVG
LFSLLDALLDRNFDELLVQLSLSEDIEQALLTQSGLLGSMLKLYENVDKGDWTHIDQVSRSLGFSAKTVEKTYEEAEKWY
QDILSK

Sequences:

>Translated_406_residues
MYAYVARQPILNRKKQTIGYELLFRDGESNAFPDDIEANQATCRLLVENFMSVGCNPALESPRSFINFPQESLISLIPTS
FPKRKIVVEVLETCIPNDELFSAIKHLHRMGYIIALDDFSLDAVWDRFLPYAHIVKLDIMQLGINVACDYVKKKKREGCK
RHYLAERVETNEEFQQAFDAGFYFYQGYFFSKPEIIKNRVVKPEEVLTMQLFQEVCRDDVNFNRIEQLIAQDVSLSYQLL
KFVNTSAVRLEKPISSFKQALVYLGEEQIKMFVTLVATAHAAINKPKELYKQSLIKGRFCELMICKCQNGTQGQQAFIVG
LFSLLDALLDRNFDELLVQLSLSEDIEQALLTQSGLLGSMLKLYENVDKGDWTHIDQVSRSLGFSAKTVEKTYEEAEKWY
QDILSK
>Mature_406_residues
MYAYVARQPILNRKKQTIGYELLFRDGESNAFPDDIEANQATCRLLVENFMSVGCNPALESPRSFINFPQESLISLIPTS
FPKRKIVVEVLETCIPNDELFSAIKHLHRMGYIIALDDFSLDAVWDRFLPYAHIVKLDIMQLGINVACDYVKKKKREGCK
RHYLAERVETNEEFQQAFDAGFYFYQGYFFSKPEIIKNRVVKPEEVLTMQLFQEVCRDDVNFNRIEQLIAQDVSLSYQLL
KFVNTSAVRLEKPISSFKQALVYLGEEQIKMFVTLVATAHAAINKPKELYKQSLIKGRFCELMICKCQNGTQGQQAFIVG
LFSLLDALLDRNFDELLVQLSLSEDIEQALLTQSGLLGSMLKLYENVDKGDWTHIDQVSRSLGFSAKTVEKTYEEAEKWY
QDILSK

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 46726; Mature: 46726

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAYVARQPILNRKKQTIGYELLFRDGESNAFPDDIEANQATCRLLVENFMSVGCNPALE
CCCHHHHCHHHHHHHHHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
SPRSFINFPQESLISLIPTSFPKRKIVVEVLETCIPNDELFSAIKHLHRMGYIIALDDFS
CCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCC
LDAVWDRFLPYAHIVKLDIMQLGINVACDYVKKKKREGCKRHYLAERVETNEEFQQAFDA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC
GFYFYQGYFFSKPEIIKNRVVKPEEVLTMQLFQEVCRDDVNFNRIEQLIAQDVSLSYQLL
CHHHHHCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KFVNTSAVRLEKPISSFKQALVYLGEEQIKMFVTLVATAHAAINKPKELYKQSLIKGRFC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHH
ELMICKCQNGTQGQQAFIVGLFSLLDALLDRNFDELLVQLSLSEDIEQALLTQSGLLGSM
HHEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LKLYENVDKGDWTHIDQVSRSLGFSAKTVEKTYEEAEKWYQDILSK
HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYAYVARQPILNRKKQTIGYELLFRDGESNAFPDDIEANQATCRLLVENFMSVGCNPALE
CCCHHHHCHHHHHHHHHCCHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
SPRSFINFPQESLISLIPTSFPKRKIVVEVLETCIPNDELFSAIKHLHRMGYIIALDDFS
CCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCC
LDAVWDRFLPYAHIVKLDIMQLGINVACDYVKKKKREGCKRHYLAERVETNEEFQQAFDA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC
GFYFYQGYFFSKPEIIKNRVVKPEEVLTMQLFQEVCRDDVNFNRIEQLIAQDVSLSYQLL
CHHHHHCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KFVNTSAVRLEKPISSFKQALVYLGEEQIKMFVTLVATAHAAINKPKELYKQSLIKGRFC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHH
ELMICKCQNGTQGQQAFIVGLFSLLDALLDRNFDELLVQLSLSEDIEQALLTQSGLLGSM
HHEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LKLYENVDKGDWTHIDQVSRSLGFSAKTVEKTYEEAEKWYQDILSK
HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]