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The map label for this gene is pssA [H]

Identifier: 209696278

GI number: 209696278

Start: 3118812

End: 3120164

Strand: Direct

Name: pssA [H]

Synonym: VSAL_I2879

Alternate gene names: 209696278

Gene position: 3118812-3120164 (Clockwise)

Preceding gene: 209696277

Following gene: 209696279

Centisome position: 93.79

GC content: 35.33

Gene sequence:

>1353_bases
ATGAACTCAACAACTCATGAAAGTAAAGAGCAGCTACGTAAACTCCCTATGTTGTCTCAACATCCTGAGAATATAAAGAC
CCTTCATACAGCTGAAGATTTTCGGTATGAACTATTAAACCAAATAAAAAAAGCTACAAAACGCATCTACATTGTGGCTC
TATATCTTGAAAATGATGATGCAGGTAGAGAAATTTTCACCGCATTATATGAAGCAAAACAAAAACAACCATCATTAGAT
GTGAATGTTCTAGTTGATTGGCACAGAGCACAAAGAGGCTTAATTGGTGCCGAAAAAAGCGATGGTAATGCTGCTCTCTA
TCGTGAATTTTCCGAAACTTACAAGTACCCAATAAATGTATTAGGTGTACCTGTAAGGAATAAAGAAGTTTTCGGTGTCC
TACACCTTAAAGGCTTTATTTTTGATGATACCGTCGTTTATAGTGGCGCAAGCTTAAATGATGTATATCTTGCTCATAAA
GATAAATATCGCTTTGATCGATACCATATACTGAACAATACATTCTTAGCCAATTCTATGGTGTCACTTATCTCCAAAAC
ACTTGTAGCTAGTGACGCTGTAAATTGCTTATCACAGGCCAATCGACCAGATACAAAATCATTAAAGCCTGCAATCAAAG
AGCTAAGGCAACAATTAAGCATTGTAAATTACCAATTTATACCTCAAACAAGAAAAGTAGGTGAAGTTGGTGTTACACCT
TTAATTGGTTTAGGTCGCAAAGGTAACCGCTTAAACAAATACATACAATTATTGCTTGCATCTGCGGTAAGTGAAATAAC
AATATGTACTCCTTATTTCAACTTTCCAAAACAGATTGCGAAAGAACTAAAAAAAGCACTCCGTCGAGGAGTGAAAGTGA
CTATTATCGTTGGTGACAAAACAGCTAACGACTTCTATATCGCTCCAGAAGAGGATTTTAGAACGATAGCAGGACTTCCC
TATTTATATGAGATGAACCTTCGACACTTTGCAAAATCAAATGAGACATCTATTGCAAGTCGACAGCTATCAATCCATTT
ATGGAAACATGAGAATAATAGTTTTCACTTAAAAGGTTTGTGGGTTGATAATGAATTCACCCTAATCACTGGTAGTAATT
TAAACCCAAGAGCTTGGAAATTAGACCTAGAAAATGGGTTGTTATTACAAGATCCAGAAAAATTGCTAATCACCGAAAAA
GAATCCGAACTAAAGGTAATACTTCAACATACTCAATTAGTCGGTTCTTACAAACAAGTCGATAAACTAGAATCTTATCC
CATCCCTGTAAAGCGTTTAATAAAACGCATTAAACGAATAAAAGCCGACCACATACTAAATCAAATTTTATAA

Upstream 100 bases:

>100_bases
CTACGATATAAAAAAGATTAAGTATTCGACATTAATCTCGGCATTTTGACTTAAATTTGCTAAAATATCGAATATTATAT
TGATAATTTAATGACTAGTT

Downstream 100 bases:

>100_bases
TTAAAAGAGGCTTATTAAGGCCTCTTTCTTTATCTAAACATTATTAATCTACGTCATCAACATAGCTAAAACACCACTGA
TGTAAGCGTGCGGGGAACTA

Product: phosphatidylserine synthase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MNSTTHESKEQLRKLPMLSQHPENIKTLHTAEDFRYELLNQIKKATKRIYIVALYLENDDAGREIFTALYEAKQKQPSLD
VNVLVDWHRAQRGLIGAEKSDGNAALYREFSETYKYPINVLGVPVRNKEVFGVLHLKGFIFDDTVVYSGASLNDVYLAHK
DKYRFDRYHILNNTFLANSMVSLISKTLVASDAVNCLSQANRPDTKSLKPAIKELRQQLSIVNYQFIPQTRKVGEVGVTP
LIGLGRKGNRLNKYIQLLLASAVSEITICTPYFNFPKQIAKELKKALRRGVKVTIIVGDKTANDFYIAPEEDFRTIAGLP
YLYEMNLRHFAKSNETSIASRQLSIHLWKHENNSFHLKGLWVDNEFTLITGSNLNPRAWKLDLENGLLLQDPEKLLITEK
ESELKVILQHTQLVGSYKQVDKLESYPIPVKRLIKRIKRIKADHILNQIL

Sequences:

>Translated_450_residues
MNSTTHESKEQLRKLPMLSQHPENIKTLHTAEDFRYELLNQIKKATKRIYIVALYLENDDAGREIFTALYEAKQKQPSLD
VNVLVDWHRAQRGLIGAEKSDGNAALYREFSETYKYPINVLGVPVRNKEVFGVLHLKGFIFDDTVVYSGASLNDVYLAHK
DKYRFDRYHILNNTFLANSMVSLISKTLVASDAVNCLSQANRPDTKSLKPAIKELRQQLSIVNYQFIPQTRKVGEVGVTP
LIGLGRKGNRLNKYIQLLLASAVSEITICTPYFNFPKQIAKELKKALRRGVKVTIIVGDKTANDFYIAPEEDFRTIAGLP
YLYEMNLRHFAKSNETSIASRQLSIHLWKHENNSFHLKGLWVDNEFTLITGSNLNPRAWKLDLENGLLLQDPEKLLITEK
ESELKVILQHTQLVGSYKQVDKLESYPIPVKRLIKRIKRIKADHILNQIL
>Mature_450_residues
MNSTTHESKEQLRKLPMLSQHPENIKTLHTAEDFRYELLNQIKKATKRIYIVALYLENDDAGREIFTALYEAKQKQPSLD
VNVLVDWHRAQRGLIGAEKSDGNAALYREFSETYKYPINVLGVPVRNKEVFGVLHLKGFIFDDTVVYSGASLNDVYLAHK
DKYRFDRYHILNNTFLANSMVSLISKTLVASDAVNCLSQANRPDTKSLKPAIKELRQQLSIVNYQFIPQTRKVGEVGVTP
LIGLGRKGNRLNKYIQLLLASAVSEITICTPYFNFPKQIAKELKKALRRGVKVTIIVGDKTANDFYIAPEEDFRTIAGLP
YLYEMNLRHFAKSNETSIASRQLSIHLWKHENNSFHLKGLWVDNEFTLITGSNLNPRAWKLDLENGLLLQDPEKLLITEK
ESELKVILQHTQLVGSYKQVDKLESYPIPVKRLIKRIKRIKADHILNQIL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87082134, Length=423, Percent_Identity=47.9905437352246, Blast_Score=411, Evalue=1e-116,
Organism=Caenorhabditis elegans, GI25143331, Length=451, Percent_Identity=24.1685144124169, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI28572961, Length=457, Percent_Identity=24.0700218818381, Blast_Score=99, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016270
- InterPro:   IPR001736 [H]

Pfam domain/function: PF00614 PLDc [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 51601; Mature: 51601

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTTHESKEQLRKLPMLSQHPENIKTLHTAEDFRYELLNQIKKATKRIYIVALYLENDD
CCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCC
AGREIFTALYEAKQKQPSLDVNVLVDWHRAQRGLIGAEKSDGNAALYREFSETYKYPINV
CHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEE
LGVPVRNKEVFGVLHLKGFIFDDTVVYSGASLNDVYLAHKDKYRFDRYHILNNTFLANSM
EEECCCCCCEEEEEEEEEEEEECEEEECCCCCCEEEEEECCCCCCCEEEEECCHHHHHHH
VSLISKTLVASDAVNCLSQANRPDTKSLKPAIKELRQQLSIVNYQFIPQTRKVGEVGVTP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCC
LIGLGRKGNRLNKYIQLLLASAVSEITICTPYFNFPKQIAKELKKALRRGVKVTIIVGDK
CCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCC
TANDFYIAPEEDFRTIAGLPYLYEMNLRHFAKSNETSIASRQLSIHLWKHENNSFHLKGL
CCCCCEECCCHHHHHHHCCCEEEECCHHHHHCCCCCHHHEEEEEEEEEEECCCEEEEEEE
WVDNEFTLITGSNLNPRAWKLDLENGLLLQDPEKLLITEKESELKVILQHTQLVGSYKQV
EECCEEEEEECCCCCCCEEEEECCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHH
DKLESYPIPVKRLIKRIKRIKADHILNQIL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSTTHESKEQLRKLPMLSQHPENIKTLHTAEDFRYELLNQIKKATKRIYIVALYLENDD
CCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCC
AGREIFTALYEAKQKQPSLDVNVLVDWHRAQRGLIGAEKSDGNAALYREFSETYKYPINV
CHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEE
LGVPVRNKEVFGVLHLKGFIFDDTVVYSGASLNDVYLAHKDKYRFDRYHILNNTFLANSM
EEECCCCCCEEEEEEEEEEEEECEEEECCCCCCEEEEEECCCCCCCEEEEECCHHHHHHH
VSLISKTLVASDAVNCLSQANRPDTKSLKPAIKELRQQLSIVNYQFIPQTRKVGEVGVTP
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCC
LIGLGRKGNRLNKYIQLLLASAVSEITICTPYFNFPKQIAKELKKALRRGVKVTIIVGDK
CCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCC
TANDFYIAPEEDFRTIAGLPYLYEMNLRHFAKSNETSIASRQLSIHLWKHENNSFHLKGL
CCCCCEECCCHHHHHHHCCCEEEECCHHHHHCCCCCHHHEEEEEEEEEEECCCEEEEEEE
WVDNEFTLITGSNLNPRAWKLDLENGLLLQDPEKLLITEKESELKVILQHTQLVGSYKQV
EECCEEEEEECCCCCCCEEEEECCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHH
DKLESYPIPVKRLIKRIKRIKADHILNQIL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]