| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is coaA [H]
Identifier: 209696274
GI number: 209696274
Start: 3115312
End: 3116235
Strand: Direct
Name: coaA [H]
Synonym: VSAL_I2875
Alternate gene names: 209696274
Gene position: 3115312-3116235 (Clockwise)
Preceding gene: 209696273
Following gene: 209696277
Centisome position: 93.69
GC content: 31.82
Gene sequence:
>924_bases GTGAATCCATACCTAAATTTCACTCGAAAGAGCTGGGCAGAATTACGTAATTCAATACCTTTAACGCTCACAGAAATCGA ATTAATGGCATTACGAGGGATTAATGAAAATATAAATATAAATGAAGTCTCAGAAATATATTTGCCGTTGATACGTTTGA TCCAATTACATATAGAAAGCTATCAACAAAAAAATATTATCCTCGATAACTTCCTTTTAAACAAAGGCTTCCAATCTCCA TTCATTATTGGTATCGCGGGAAGCGTTGCTGTTGGTAAAAGTACGACAGCTCGTATTTTACAAACGCTATTAACTCAATT GCTTCCAGAATTGAGCACTCAGCTAGTAACCACTGATGGATTTTTATATCCCAACAAATATTTAAATGAACATAATATTA TGCATAAGAAGGGATTTCCTGAATCTTATGATATTCAAACCTTAGTTTCCTTTGTTTCAGATATAAAATCAGGTAAGGCA AACGTAAAAGCACCAGTATATTCGCATTTGACCTACGATGTGACAAATGAAAAAAAAGTAATTAATAAACCTGACATACT AATAATTGAAGGCTTAAATGTACTTCAAAATGGCAGTGATTACCCTCACGATAACCATAATACTTTCGTTTCTGATTTTC TTGATTTTTCGATTTATGTCGATGCGGCACCCATATTACTAAAACAGTGGTATGTAGATCGTTTTCTTAAATTAAGAATC AGTACATTCAAAAAAGATAATTCTTACTTCTCACACTACACAGGATTATCCATTGAAAAATCCATTGAAAAAGCAGAGCA TATTTGGAATACCATCAATGGATTAAATTTAACTGAAAATATATTACCTACCAAAGAAAGAGCCAGTTTAATTCTAACGA AAGGTGAACATCATTCTATTGAATACGTATCGATAAAAAAATAA
Upstream 100 bases:
>100_bases CTTTTTTCACTCAAACTTTCTTAAAAACAAACCTAGGCTACTTTTTTATTCTTATGCCTTACTGTATTGTTCAAATTCAT TTAATCATCTGGTAAGTATT
Downstream 100 bases:
>100_bases TCACGCTTTTCTAACTGAAATCTCACCACCGAAATAAGATTCGACGATACAGTTACGTTCAAGCAATATCGCACCTTGCG AATTTATACCTCGACAAACA
Product: pantothenate kinase
Products: NA
Alternate protein names: Pantothenic acid kinase [H]
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MNPYLNFTRKSWAELRNSIPLTLTEIELMALRGINENININEVSEIYLPLIRLIQLHIESYQQKNIILDNFLLNKGFQSP FIIGIAGSVAVGKSTTARILQTLLTQLLPELSTQLVTTDGFLYPNKYLNEHNIMHKKGFPESYDIQTLVSFVSDIKSGKA NVKAPVYSHLTYDVTNEKKVINKPDILIIEGLNVLQNGSDYPHDNHNTFVSDFLDFSIYVDAAPILLKQWYVDRFLKLRI STFKKDNSYFSHYTGLSIEKSIEKAEHIWNTINGLNLTENILPTKERASLILTKGEHHSIEYVSIKK
Sequences:
>Translated_307_residues MNPYLNFTRKSWAELRNSIPLTLTEIELMALRGINENININEVSEIYLPLIRLIQLHIESYQQKNIILDNFLLNKGFQSP FIIGIAGSVAVGKSTTARILQTLLTQLLPELSTQLVTTDGFLYPNKYLNEHNIMHKKGFPESYDIQTLVSFVSDIKSGKA NVKAPVYSHLTYDVTNEKKVINKPDILIIEGLNVLQNGSDYPHDNHNTFVSDFLDFSIYVDAAPILLKQWYVDRFLKLRI STFKKDNSYFSHYTGLSIEKSIEKAEHIWNTINGLNLTENILPTKERASLILTKGEHHSIEYVSIKK >Mature_307_residues MNPYLNFTRKSWAELRNSIPLTLTEIELMALRGINENININEVSEIYLPLIRLIQLHIESYQQKNIILDNFLLNKGFQSP FIIGIAGSVAVGKSTTARILQTLLTQLLPELSTQLVTTDGFLYPNKYLNEHNIMHKKGFPESYDIQTLVSFVSDIKSGKA NVKAPVYSHLTYDVTNEKKVINKPDILIIEGLNVLQNGSDYPHDNHNTFVSDFLDFSIYVDAAPILLKQWYVDRFLKLRI STFKKDNSYFSHYTGLSIEKSIEKAEHIWNTINGLNLTENILPTKERASLILTKGEHHSIEYVSIKK
Specific function: Coenzyme A (CoA) biosynthesis; first step. [C]
COG id: COG1072
COG function: function code H; Panthothenate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic pantothenate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790409, Length=308, Percent_Identity=56.8181818181818, Blast_Score=362, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004566 - InterPro: IPR006083 [H]
Pfam domain/function: PF00485 PRK [H]
EC number: =2.7.1.33 [H]
Molecular weight: Translated: 35143; Mature: 35143
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPYLNFTRKSWAELRNSIPLTLTEIELMALRGINENININEVSEIYLPLIRLIQLHIES CCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH YQQKNIILDNFLLNKGFQSPFIIGIAGSVAVGKSTTARILQTLLTQLLPELSTQLVTTDG HHHCCEEHHHHHHHCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHEEECCC FLYPNKYLNEHNIMHKKGFPESYDIQTLVSFVSDIKSGKANVKAPVYSHLTYDVTNEKKV EECCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCEE INKPDILIIEGLNVLQNGSDYPHDNHNTFVSDFLDFSIYVDAAPILLKQWYVDRFLKLRI CCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHH STFKKDNSYFSHYTGLSIEKSIEKAEHIWNTINGLNLTENILPTKERASLILTKGEHHSI HHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCEEEEECCCCCCE EYVSIKK EEEEECC >Mature Secondary Structure MNPYLNFTRKSWAELRNSIPLTLTEIELMALRGINENININEVSEIYLPLIRLIQLHIES CCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH YQQKNIILDNFLLNKGFQSPFIIGIAGSVAVGKSTTARILQTLLTQLLPELSTQLVTTDG HHHCCEEHHHHHHHCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHEEECCC FLYPNKYLNEHNIMHKKGFPESYDIQTLVSFVSDIKSGKANVKAPVYSHLTYDVTNEKKV EECCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCEE INKPDILIIEGLNVLQNGSDYPHDNHNTFVSDFLDFSIYVDAAPILLKQWYVDRFLKLRI CCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHH STFKKDNSYFSHYTGLSIEKSIEKAEHIWNTINGLNLTENILPTKERASLILTKGEHHSI HHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCEEEEECCCCCCE EYVSIKK EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA