| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is rpoC [H]
Identifier: 209696265
GI number: 209696265
Start: 3100411
End: 3104616
Strand: Reverse
Name: rpoC [H]
Synonym: VSAL_I2865
Alternate gene names: 209696265
Gene position: 3104616-3100411 (Counterclockwise)
Preceding gene: 209696266
Following gene: 209696263
Centisome position: 93.37
GC content: 43.25
Gene sequence:
>4206_bases GTGAAAGACTTATTAAAGTTTCTGAAAGCACAACATAAGACCGAAGAATTTGATGCAATCAAAATCGGTCTTGCTTCACC TGACCAAATTCGTTCATGGTCTTTTGGTGAAGTTAAAAAGCCAGAAACAATCAACTATCGTACCTTTAAGCCAGAACGTG ACGGTCTTTTCTGTGCACGTATCTTTGGCCCAGTGAAAGACTACGAGTGCTTATGTGGTAAATATAAGCGCCTGAAGCAC CGTGGTGTTATCTGTGAAAAATGTGGCGTAGAAGTAACGCAAACTAAAGTTCGTCGTGACCGTATGGGTCATATTGAACT TGCGTCTCCTGTTGCACACATCTGGTTCCTTAAGTCACTTCCGTCTCGTATTGGTTTGTTAATGGACATCCCTCTGCGTG ATATCGAACGTGTACTTTATTTTGAATCATATGTGGTTACAGAGCCAGGTATGACTGACTTAGAGCGCAGCCAACTTCTT TCAGAAGAAGAATATCTTGATAAGCTTGAAGAGTTCGGTGACGAATTCACAGCTAAGATGGGTGCGGAAGCGATTAAAGA CTTGCTTGGTTCTATGGACATGCAAGCTGAAATCGAGAACATGCGTGAAGAGTTAGAAACAACTAACTCAGAAACAAAAC GTAAGAAGCTGACTAAGCGTTTAAAACTTGTAGAAGCATTTGTTCAATCTGGTAACAACCCAGAATGGATGATCTTAACT GTTCTACCTGTTCTTCCGCCAGATCTTCGTCCTCTAGTTCCACTAGATGGCGGTCGTTTTGCTACGTCTGATCTAAATGA TTTATACCGTCGTGTGATTAACCGTAACAACCGTTTGAAGCGTCTTTTAGACTTAGCTGCACCAGACATCATCGTACGTA ATGAAAAACGTATGCTGCAAGAGTCTGTTGATGCGCTGCTTGATAACGGTCGTCGTGGTCGTGCGATTACAGGTTCTAAC AAGCGTCCTTTGAAATCTCTTGCTGATATGATCAAGGGTAAACAAGGTCGTTTCCGTCAGAACTTGCTTGGTAAACGTGT AGACTACTCTGGTCGTTCTGTTATTACAGTAGGTCCATACCTTCGTCTACATCAGTGTGGTCTTCCTAAGAAGATGGCAC TTGAATTATTTAAACCATTTATTTATAGCAAATTAGAAGGTCGTGGTTTTGCTACGACAATCAAAGCTGCTAAGAAAATG GTAGAGCGTGAAGAAGCGATCGTTTGGGATATCCTAGATGACGTTATTCGTGAACACCCAGTACTGCTTAACCGTGCACC AACACTTCACCGTCTTGGTATTCAAGCGTTTGAACCAGTACTAATCGAAGGTAAAGCGATTCAGCTGCACCCATTAGTGT GTGCGGCATATAATGCCGATTTCGATGGTGACCAGATGGCGGTACACGTACCACTAACTCTGGAAGCTCAGCTAGAAGCT CGTACCCTAATGATGTCGACGAATAATATTCTGTCGCCAGCATCAGGTGATCCAATCATCGTTCCTTCTCAGGATGTTGT ATTAGGTCTGTACTACATGACGCGTGACAGAATTAACGCGAAAGGCGAAGGCATGTACCTAGAAGGTTTTGCTGAAGCTG AAAAAGCATACCGTACAGGTAATGCTGAGCTACATGCTCGCGTTAAAGTTCGTATCACAGAAGTTCTTCGTGATGAGAAC GGTATTGAAACTCGTGAAACTAAACTGGTTGATACGACTGTTGGTCGTGCAATGCTATGGCAGATCGTTCCTGAAGGTCT TCCTTACAGCATCATTAACCAGAAGTTAGGTAAGAAGCAAATCTCTAACCTATTAAACGAGGCATATCGTACTCTTGGTT CTAAAGATACAGTAATCTTTGCAGACCAAATCATGTACACCGGTTTCGCATACGCGGCATTGTCTGGTGCGTCTGTTGGT ATCGATGACATGGTTATCCCTGATGCTAAGTATACGAAAGTTGCTGAAGCAGAAGAAGAAGTTAAGCAAATTCAAGAACA ATATCAATCTGGTCTTGTAACTGCTGGCGAACGTTACAACAAAGTTATCGATATCTGGGCAGCAACGAATGAACAAGTTG CTAAAGAGATGATGGATAACTTGTCTTCAGAAACTGTGCTTAACCGCGATGGTGAAGAAGAGCAACAAGAATCGTTTAAC AGCGTTTACATGATGGCCGATTCAGGTGCTCGTGGTTCTGCAGCTCAGATTCGTCAGCTTGCAGGTATGCGTGGTCTGAT GGCGAAACCAGATGGTTCAATCATCGAAACACCGATCACGGCGAACTTCCGTGAAGGTCTAAACGTAAACCAATATTTCA TCTCAACGCATGGTGCGCGTAAAGGTCTTGCCGATACTGCACTTAAAACAGCGAACTCAGGTTACCTGACTCGTCGTTTA GTAGACGTTGCTCAAGATGTAGTCGTTCATTTAGATGACTGTGGAACACTTGAAGGTGTTACCATGATGCCTCTAATTGA AGGTGGTGATGTTAAAGAACCTCTACATGAACGTGTTCTAGGTCGTGTCGTTGCTGAAGATGTATTGAAACCAGGTACTG ATGAGATCCTTCTTCCACGTAACACGCTTCTTGATGAGAAGCAGTGTCAAATCGTTGAAGAAAACTCAGTTGACCAAATC AAAGTACGTTCAGTTGTAAGTTGTGAAGCTGACTTCGGTTGTTGTGCAAACTGTTATGGCCGTGACCTTGCTCGTGGACA CATGGTAAACCAAGGTGAGGCAGTCGGTGTTATTGCGGCTCAGTCTATTGGTGAACCTGGTACACAGCTTACGATGCGTA CGTTCCATATCGGTGGTGCGGCATCTACAGCAGCAGCAGACAACAGCATTCAAGTTAAGACGACAGGTTCGATTAAACTT CATAATGCTAAGCACGTAACGAATAACGAAGGCAACCTAGTTATTACTTCTCGTGCATCTCAACTGACGGTTATTGATGG GCATGGTCGTACGAAAGAAAGCTACAAGCTATCTTACGGTACTATTCTTTCTAAGAAAGATGGTGATGTTGTGACTCAAG GCGATAAGATCGCAGCTTGGGACCCGCATACAATGCCAATCATCACAGAAGTAAAAGGTCAAGTTCAATTCGTTGATATG ATTGATGGTGTGACTATTACAACTCAAACTGATGAGTTAACTGGTCTATCGTCAATTGTTATCCTTGATACGGCTGAGCG TGCTTCTGCTGGTAAAGACATGCGTCCAACAGTGAAACTTGTTGATGCGAATGGTCGTGACATCATGATCCCTGGCACTG AAATGCCAGCTCAATACTTCCTACCAGGTAAAGCAATTGTTAACTTGGCTGATGGTGGCGATGTAGGTATCGGTGAAACA CTGGCTCGTATTCCTCAAGCTTCAAGTGGTACTAAAGATATTACCGGTGGTCTTCCACGCGTTGCGGATTTATTTGAAGC TCGTAAACCTAAAGAGCCAGCAATTCTTGCTGAGCACGCAGGTATCGTTGCTTTTGGTAAAGAAACGAAAGGTAAAGTAC GCTTATTGATCACTCGTGATGATACTGGTGAAGTTTATGAAGAAATGATTCATAAACATCGTCAACTTAACATTTTTGAT GGTGATAAAGTTGAACGCGGTGACGTTATTTCTGATGGTCCAGAAACACCACATGATATTCTACGTTTACGTGGTATTCA TGCCGTTACTGAATACATCACAAACGAAGTTCAAGAAGTTTACCGTTTACAAGGCGTTAAGATTAACGATAAGCACATTG AGACTATCGTTCGTCAAATGCTACGTAAGTGTACTATCACACATTCTGGTGACTCTACTTTCCTTGAAGGTGAGCAACTA GAATTTGCAAACGTAACTATTGCAAACCGTCAGCTTGAAGCTGAAGGAAAGCAACCAGCTCGTTTTGGTCGTGATTTACT AGGTATTACTAAAGCGTCTCTTGCTACTGAGTCGTTCATCTCTGCTGCATCGTTCCAAGAAACGACGCGCGTACTTACTG AGGCTGCGGTTTCTGGTAAGCGTGATGAACTACGTGGTCTGAAAGAAAACGTAATCGTTGGTCGTCTAATTCCAGCGGGT ACAGGTTTCTCATACCACCAAGCACGTCAAAAGCAAAAAGCAGCAGCGAAAGTTGCGCCTTCTGCTGAAGAAGCAACAGA TAACTTAGCGGCACTATTGAATGCGGGTTTCTCTTCTGAAGAGTAA
Upstream 100 bases:
>100_bases TCAACATCGAGTTAGAAGACGAAGAATAATCTCATTGAGATTGTCCGGTAGAATATAAGGCGCTCGCCGAGCGCCTTTTT TCTCCTTACAGGAGCCGAAT
Downstream 100 bases:
>100_bases TTAGTTTTAATATTCGCTAAATAAAAAGCCCTACAGAAATGCAGGGCTTTTTTTATATTTAAACGTATGTGTGATTATAA CTGTGTGATTAAAACAACGT
Product: DNA-directed RNA polymerase subunit beta'
Products: NA
Alternate protein names: RNAP subunit beta'; RNA polymerase subunit beta'; Transcriptase subunit beta' [H]
Number of amino acids: Translated: 1401; Mature: 1401
Protein sequence:
>1401_residues MKDLLKFLKAQHKTEEFDAIKIGLASPDQIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKH RGVICEKCGVEVTQTKVRRDRMGHIELASPVAHIWFLKSLPSRIGLLMDIPLRDIERVLYFESYVVTEPGMTDLERSQLL SEEEYLDKLEEFGDEFTAKMGAEAIKDLLGSMDMQAEIENMREELETTNSETKRKKLTKRLKLVEAFVQSGNNPEWMILT VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSN KRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYSKLEGRGFATTIKAAKKM VEREEAIVWDILDDVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RTLMMSTNNILSPASGDPIIVPSQDVVLGLYYMTRDRINAKGEGMYLEGFAEAEKAYRTGNAELHARVKVRITEVLRDEN GIETRETKLVDTTVGRAMLWQIVPEGLPYSIINQKLGKKQISNLLNEAYRTLGSKDTVIFADQIMYTGFAYAALSGASVG IDDMVIPDAKYTKVAEAEEEVKQIQEQYQSGLVTAGERYNKVIDIWAATNEQVAKEMMDNLSSETVLNRDGEEEQQESFN SVYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVNQYFISTHGARKGLADTALKTANSGYLTRRL VDVAQDVVVHLDDCGTLEGVTMMPLIEGGDVKEPLHERVLGRVVAEDVLKPGTDEILLPRNTLLDEKQCQIVEENSVDQI KVRSVVSCEADFGCCANCYGRDLARGHMVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASTAAADNSIQVKTTGSIKL HNAKHVTNNEGNLVITSRASQLTVIDGHGRTKESYKLSYGTILSKKDGDVVTQGDKIAAWDPHTMPIITEVKGQVQFVDM IDGVTITTQTDELTGLSSIVILDTAERASAGKDMRPTVKLVDANGRDIMIPGTEMPAQYFLPGKAIVNLADGGDVGIGET LARIPQASSGTKDITGGLPRVADLFEARKPKEPAILAEHAGIVAFGKETKGKVRLLITRDDTGEVYEEMIHKHRQLNIFD GDKVERGDVISDGPETPHDILRLRGIHAVTEYITNEVQEVYRLQGVKINDKHIETIVRQMLRKCTITHSGDSTFLEGEQL EFANVTIANRQLEAEGKQPARFGRDLLGITKASLATESFISAASFQETTRVLTEAAVSGKRDELRGLKENVIVGRLIPAG TGFSYHQARQKQKAAAKVAPSAEEATDNLAALLNAGFSSEE
Sequences:
>Translated_1401_residues MKDLLKFLKAQHKTEEFDAIKIGLASPDQIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKH RGVICEKCGVEVTQTKVRRDRMGHIELASPVAHIWFLKSLPSRIGLLMDIPLRDIERVLYFESYVVTEPGMTDLERSQLL SEEEYLDKLEEFGDEFTAKMGAEAIKDLLGSMDMQAEIENMREELETTNSETKRKKLTKRLKLVEAFVQSGNNPEWMILT VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSN KRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYSKLEGRGFATTIKAAKKM VEREEAIVWDILDDVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RTLMMSTNNILSPASGDPIIVPSQDVVLGLYYMTRDRINAKGEGMYLEGFAEAEKAYRTGNAELHARVKVRITEVLRDEN GIETRETKLVDTTVGRAMLWQIVPEGLPYSIINQKLGKKQISNLLNEAYRTLGSKDTVIFADQIMYTGFAYAALSGASVG IDDMVIPDAKYTKVAEAEEEVKQIQEQYQSGLVTAGERYNKVIDIWAATNEQVAKEMMDNLSSETVLNRDGEEEQQESFN SVYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVNQYFISTHGARKGLADTALKTANSGYLTRRL VDVAQDVVVHLDDCGTLEGVTMMPLIEGGDVKEPLHERVLGRVVAEDVLKPGTDEILLPRNTLLDEKQCQIVEENSVDQI KVRSVVSCEADFGCCANCYGRDLARGHMVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASTAAADNSIQVKTTGSIKL HNAKHVTNNEGNLVITSRASQLTVIDGHGRTKESYKLSYGTILSKKDGDVVTQGDKIAAWDPHTMPIITEVKGQVQFVDM IDGVTITTQTDELTGLSSIVILDTAERASAGKDMRPTVKLVDANGRDIMIPGTEMPAQYFLPGKAIVNLADGGDVGIGET LARIPQASSGTKDITGGLPRVADLFEARKPKEPAILAEHAGIVAFGKETKGKVRLLITRDDTGEVYEEMIHKHRQLNIFD GDKVERGDVISDGPETPHDILRLRGIHAVTEYITNEVQEVYRLQGVKINDKHIETIVRQMLRKCTITHSGDSTFLEGEQL EFANVTIANRQLEAEGKQPARFGRDLLGITKASLATESFISAASFQETTRVLTEAAVSGKRDELRGLKENVIVGRLIPAG TGFSYHQARQKQKAAAKVAPSAEEATDNLAALLNAGFSSEE >Mature_1401_residues MKDLLKFLKAQHKTEEFDAIKIGLASPDQIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKH RGVICEKCGVEVTQTKVRRDRMGHIELASPVAHIWFLKSLPSRIGLLMDIPLRDIERVLYFESYVVTEPGMTDLERSQLL SEEEYLDKLEEFGDEFTAKMGAEAIKDLLGSMDMQAEIENMREELETTNSETKRKKLTKRLKLVEAFVQSGNNPEWMILT VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSN KRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYSKLEGRGFATTIKAAKKM VEREEAIVWDILDDVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RTLMMSTNNILSPASGDPIIVPSQDVVLGLYYMTRDRINAKGEGMYLEGFAEAEKAYRTGNAELHARVKVRITEVLRDEN GIETRETKLVDTTVGRAMLWQIVPEGLPYSIINQKLGKKQISNLLNEAYRTLGSKDTVIFADQIMYTGFAYAALSGASVG IDDMVIPDAKYTKVAEAEEEVKQIQEQYQSGLVTAGERYNKVIDIWAATNEQVAKEMMDNLSSETVLNRDGEEEQQESFN SVYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVNQYFISTHGARKGLADTALKTANSGYLTRRL VDVAQDVVVHLDDCGTLEGVTMMPLIEGGDVKEPLHERVLGRVVAEDVLKPGTDEILLPRNTLLDEKQCQIVEENSVDQI KVRSVVSCEADFGCCANCYGRDLARGHMVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASTAAADNSIQVKTTGSIKL HNAKHVTNNEGNLVITSRASQLTVIDGHGRTKESYKLSYGTILSKKDGDVVTQGDKIAAWDPHTMPIITEVKGQVQFVDM IDGVTITTQTDELTGLSSIVILDTAERASAGKDMRPTVKLVDANGRDIMIPGTEMPAQYFLPGKAIVNLADGGDVGIGET LARIPQASSGTKDITGGLPRVADLFEARKPKEPAILAEHAGIVAFGKETKGKVRLLITRDDTGEVYEEMIHKHRQLNIFD GDKVERGDVISDGPETPHDILRLRGIHAVTEYITNEVQEVYRLQGVKINDKHIETIVRQMLRKCTITHSGDSTFLEGEQL EFANVTIANRQLEAEGKQPARFGRDLLGITKASLATESFISAASFQETTRVLTEAAVSGKRDELRGLKENVIVGRLIPAG TGFSYHQARQKQKAAAKVAPSAEEATDNLAALLNAGFSSEE
Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates [H]
COG id: COG0086
COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RNA polymerase beta' chain family [H]
Homologues:
Organism=Homo sapiens, GI4505939, Length=910, Percent_Identity=26.7032967032967, Blast_Score=211, Evalue=6e-54, Organism=Homo sapiens, GI39725938, Length=307, Percent_Identity=31.9218241042345, Blast_Score=132, Evalue=3e-30, Organism=Homo sapiens, GI103471997, Length=597, Percent_Identity=26.1306532663317, Blast_Score=117, Evalue=7e-26, Organism=Escherichia coli, GI2367335, Length=1405, Percent_Identity=81.423487544484, Blast_Score=2350, Evalue=0.0, Organism=Caenorhabditis elegans, GI71987878, Length=905, Percent_Identity=26.0773480662983, Blast_Score=191, Evalue=2e-48, Organism=Caenorhabditis elegans, GI25145495, Length=676, Percent_Identity=26.4792899408284, Blast_Score=186, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6320061, Length=648, Percent_Identity=26.5432098765432, Blast_Score=170, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6324690, Length=732, Percent_Identity=25.2732240437158, Blast_Score=169, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6324917, Length=282, Percent_Identity=28.0141843971631, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI17530899, Length=968, Percent_Identity=24.3801652892562, Blast_Score=199, Evalue=2e-50, Organism=Drosophila melanogaster, GI281360912, Length=881, Percent_Identity=24.1770715096481, Blast_Score=179, Evalue=1e-44, Organism=Drosophila melanogaster, GI17647875, Length=339, Percent_Identity=28.3185840707965, Blast_Score=102, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000722 - InterPro: IPR006592 - InterPro: IPR007080 - InterPro: IPR007066 - InterPro: IPR007083 - InterPro: IPR007081 - InterPro: IPR012754 [H]
Pfam domain/function: PF04997 RNA_pol_Rpb1_1; PF00623 RNA_pol_Rpb1_2; PF04983 RNA_pol_Rpb1_3; PF05000 RNA_pol_Rpb1_4; PF04998 RNA_pol_Rpb1_5 [H]
EC number: =2.7.7.6 [H]
Molecular weight: Translated: 154955; Mature: 154955
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLLKFLKAQHKTEEFDAIKIGLASPDQIRSWSFGEVKKPETINYRTFKPERDGLFCAR CHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCEEEEH IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIELASPVAHIWFLKSL HHCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH PSRIGLLMDIPLRDIERVLYFESYVVTEPGMTDLERSQLLSEEEYLDKLEEFGDEFTAKM HHHCCEEEECCHHHHHHHHHHHHEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH GAEAIKDLLGSMDMQAEIENMREELETTNSETKRKKLTKRLKLVEAFVQSGNNPEWMILT HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECHHHHHH ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY HHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEECCC LRLHQCGLPKKMALELFKPFIYSKLEGRGFATTIKAAKKMVEREEAIVWDILDDVIREHP HHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA EEECCCCCHHHHCHHHCCCEEEECCEEEEECEEEEEECCCCCCCCEEEEEEEEEECCCCE RTLMMSTNNILSPASGDPIIVPSQDVVLGLYYMTRDRINAKGEGMYLEGFAEAEKAYRTG EEEEEECCCCCCCCCCCEEEECCCHHEEEEHHHHHHCCCCCCCCEEEECHHHHHHHHHCC NAELHARVKVRITEVLRDENGIETRETKLVDTTVGRAMLWQIVPEGLPYSIINQKLGKKQ CCEEEEEEEEEEHHHHHCCCCCCHHHHEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHH ISNLLNEAYRTLGSKDTVIFADQIMYTGFAYAALSGASVGIDDMVIPDAKYTKVAEAEEE HHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHH VKQIQEQYQSGLVTAGERYNKVIDIWAATNEQVAKEMMDNLSSETVLNRDGEEEQQESFN HHHHHHHHHCCCEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHCCCCCHHHHHCCC SVYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVNQYFISTHGAR EEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHCCCCCCEEEEECCCCC KGLADTALKTANSGYLTRRLVDVAQDVVVHLDDCGTLEGVTMMPLIEGGDVKEPLHERVL CCHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCCHHHHHHHH GRVVAEDVLKPGTDEILLPRNTLLDEKQCQIVEENSVDQIKVRSVVSCEADFGCCANCYG HHHHHHHHHCCCCCCEEECCHHHCCCHHHHEECCCCCCCEEHHHHEECCCCCCCHHHHHH RDLARGHMVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASTAAADNSIQVKTTGSIKL HHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCEEE HNAKHVTNNEGNLVITSRASQLTVIDGHGRTKESYKLSYGTILSKKDGDVVTQGDKIAAW ECCCEEECCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEEEEECCCCCEEECCCEEEEC DPHTMPIITEVKGQVQFVDMIDGVTITTQTDELTGLSSIVILDTAERASAGKDMRPTVKL CCCCCCEEEECCCCEEEEEECCCEEEEECCHHHCCCCEEEEEECHHHHCCCCCCCCEEEE VDANGRDIMIPGTEMPAQYFLPGKAIVNLADGGDVGIGETLARIPQASSGTKDITGGLPR EECCCCEEEECCCCCCHHHCCCCHHEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCHH VADLFEARKPKEPAILAEHAGIVAFGKETKGKVRLLITRDDTGEVYEEMIHKHRQLNIFD HHHHHHHCCCCCCCEEECCCCEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHCEEEEEC GDKVERGDVISDGPETPHDILRLRGIHAVTEYITNEVQEVYRLQGVKINDKHIETIVRQM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LRKCTITHSGDSTFLEGEQLEFANVTIANRQLEAEGKQPARFGRDLLGITKASLATESFI HHHCCEEECCCCCEECCCCEEEEEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH SAASFQETTRVLTEAAVSGKRDELRGLKENVIVGRLIPAGTGFSYHQARQKQKAAAKVAP HHHHHHHHHHHHHHHHHCCCHHHHHCHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC SAEEATDNLAALLNAGFSSEE CHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKDLLKFLKAQHKTEEFDAIKIGLASPDQIRSWSFGEVKKPETINYRTFKPERDGLFCAR CHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCEEEEH IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIELASPVAHIWFLKSL HHCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH PSRIGLLMDIPLRDIERVLYFESYVVTEPGMTDLERSQLLSEEEYLDKLEEFGDEFTAKM HHHCCEEEECCHHHHHHHHHHHHEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH GAEAIKDLLGSMDMQAEIENMREELETTNSETKRKKLTKRLKLVEAFVQSGNNPEWMILT HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECHHHHHH ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY HHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEECCC LRLHQCGLPKKMALELFKPFIYSKLEGRGFATTIKAAKKMVEREEAIVWDILDDVIREHP HHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA EEECCCCCHHHHCHHHCCCEEEECCEEEEECEEEEEECCCCCCCCEEEEEEEEEECCCCE RTLMMSTNNILSPASGDPIIVPSQDVVLGLYYMTRDRINAKGEGMYLEGFAEAEKAYRTG EEEEEECCCCCCCCCCCEEEECCCHHEEEEHHHHHHCCCCCCCCEEEECHHHHHHHHHCC NAELHARVKVRITEVLRDENGIETRETKLVDTTVGRAMLWQIVPEGLPYSIINQKLGKKQ CCEEEEEEEEEEHHHHHCCCCCCHHHHEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHH ISNLLNEAYRTLGSKDTVIFADQIMYTGFAYAALSGASVGIDDMVIPDAKYTKVAEAEEE HHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHH VKQIQEQYQSGLVTAGERYNKVIDIWAATNEQVAKEMMDNLSSETVLNRDGEEEQQESFN HHHHHHHHHCCCEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHCCCCCHHHHHCCC SVYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVNQYFISTHGAR EEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHCCCCCCEEEEECCCCC KGLADTALKTANSGYLTRRLVDVAQDVVVHLDDCGTLEGVTMMPLIEGGDVKEPLHERVL CCHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCCCCHHHHHHHH GRVVAEDVLKPGTDEILLPRNTLLDEKQCQIVEENSVDQIKVRSVVSCEADFGCCANCYG HHHHHHHHHCCCCCCEEECCHHHCCCHHHHEECCCCCCCEEHHHHEECCCCCCCHHHHHH RDLARGHMVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASTAAADNSIQVKTTGSIKL HHHHCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCEEE HNAKHVTNNEGNLVITSRASQLTVIDGHGRTKESYKLSYGTILSKKDGDVVTQGDKIAAW ECCCEEECCCCCEEEEECCCEEEEECCCCCCCCCEEEEEEEEEECCCCCEEECCCEEEEC DPHTMPIITEVKGQVQFVDMIDGVTITTQTDELTGLSSIVILDTAERASAGKDMRPTVKL CCCCCCEEEECCCCEEEEEECCCEEEEECCHHHCCCCEEEEEECHHHHCCCCCCCCEEEE VDANGRDIMIPGTEMPAQYFLPGKAIVNLADGGDVGIGETLARIPQASSGTKDITGGLPR EECCCCEEEECCCCCCHHHCCCCHHEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCHH VADLFEARKPKEPAILAEHAGIVAFGKETKGKVRLLITRDDTGEVYEEMIHKHRQLNIFD HHHHHHHCCCCCCCEEECCCCEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHCEEEEEC GDKVERGDVISDGPETPHDILRLRGIHAVTEYITNEVQEVYRLQGVKINDKHIETIVRQM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LRKCTITHSGDSTFLEGEQLEFANVTIANRQLEAEGKQPARFGRDLLGITKASLATESFI HHHCCEEECCCCCEECCCCEEEEEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHH SAASFQETTRVLTEAAVSGKRDELRGLKENVIVGRLIPAGTGFSYHQARQKQKAAAKVAP HHHHHHHHHHHHHHHHHCCCHHHHHCHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC SAEEATDNLAALLNAGFSSEE CHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA