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The map label for this gene is rsgA1 [H]

Identifier: 209696190

GI number: 209696190

Start: 3016564

End: 3017619

Strand: Direct

Name: rsgA1 [H]

Synonym: VSAL_I2784

Alternate gene names: 209696190

Gene position: 3016564-3017619 (Clockwise)

Preceding gene: 209696188

Following gene: 209696191

Centisome position: 90.72

GC content: 39.58

Gene sequence:

>1056_bases
GTGGCAAAGAAGAAAAAACTAACTAAAGGCCAAGTACGCCGAGTACGTTCAAATCAAAGCAAACGTATTGAAAAAATAAA
AACCACTGTCGAGTGGGATGAATCTTCATTAGAAGCGGCTAAAGAAGGGTTAGTTATTACTCGCTTTGGTCAACATGCAG
ATATCGAAGATCCAGACAGCAAAGAAATACATCGTTGTAATTTACGTCGAGGTATCGAAAGCTTAGTTTCTGGCGATCGT
GTTATTTGGCGTCCAGGTACTAAGATTCTTGCTGGTATTTCAGGTGTTGTTGAAGCGGTAAAACCACGAACCTCTATGCT
AACTCGCCCAGATTATTACGATGGTATTAAGCCCGTGGCCGCCAACGTTGATCAAATGGTGATTGTTTCTTCTATTCTTC
CTGAGTTGTCACTTAACATTATTGATCGCTATCTTATCGCCTCTGAGACTCTACAGATAAAGCCATTAATCGTATTAAAC
AAAGTCGACTTGCTTTCTGAACAAGAATTTATTGATGTGAGACAAATTCTGAGTTTATATGAAGATATTGGCTATAAAGT
AAAATTCGTTAGTAAAGAGTCCGGCTATGGCATACAAGAGCTAGAAGCTGAACTGAAAGATCACATTAATATTTTTGTTG
GTCAATCTGGTGTTGGTAAATCAAGTGTTGTAAATGCATTAATGCCTGAACTTGAAATTATGGAAGGCGCTGTCTCTGAA
AACTCAGGTCTTGGTCAACATACTACGACTGCTGCTCGTCTGTATCACTTCCCACATGGTGGCGATCTTATCGATTCCCC
AGGAGTTCGTGAATTTGGCTTATGGCATTTAGAGAAAGAAGAAGTTACCGCCTCTTTTGTCGAGTTTAAAGACTTTATTG
GTGGCTGTAAGTTTAGAGACTGTACGCATAAAGATGACCCAGGCTGTCTTCTTCAAGAAGCCGTCTCTAATGGTAAAATT
GCGAAACTTCGTTTTGATAGCTATCACCGAATCATTGAAAGCATGTCTGAAAATAAAGCGAACCGTCAATTTTCTCGTAG
CAGAAAAGCCGATTAA

Upstream 100 bases:

>100_bases
ATAGAGAGTTGCCTATTTTGTAACTAAAAAGGGTATGATACTCGGGCCGATTTATCTTTCAACATAAAACTGAAAGCCAA
CCTACAAGTGAAATCATTTC

Downstream 100 bases:

>100_bases
TAAACTAAGTAAAGATGTGGTAACATTTACCTTAATTGATAACTAGTAGGCAAACAACGTGTCAGATAATTTAAAAATCG
GGTTACAATATTTAACTCCA

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MAKKKKLTKGQVRRVRSNQSKRIEKIKTTVEWDESSLEAAKEGLVITRFGQHADIEDPDSKEIHRCNLRRGIESLVSGDR
VIWRPGTKILAGISGVVEAVKPRTSMLTRPDYYDGIKPVAANVDQMVIVSSILPELSLNIIDRYLIASETLQIKPLIVLN
KVDLLSEQEFIDVRQILSLYEDIGYKVKFVSKESGYGIQELEAELKDHINIFVGQSGVGKSSVVNALMPELEIMEGAVSE
NSGLGQHTTTAARLYHFPHGGDLIDSPGVREFGLWHLEKEEVTASFVEFKDFIGGCKFRDCTHKDDPGCLLQEAVSNGKI
AKLRFDSYHRIIESMSENKANRQFSRSRKAD

Sequences:

>Translated_351_residues
MAKKKKLTKGQVRRVRSNQSKRIEKIKTTVEWDESSLEAAKEGLVITRFGQHADIEDPDSKEIHRCNLRRGIESLVSGDR
VIWRPGTKILAGISGVVEAVKPRTSMLTRPDYYDGIKPVAANVDQMVIVSSILPELSLNIIDRYLIASETLQIKPLIVLN
KVDLLSEQEFIDVRQILSLYEDIGYKVKFVSKESGYGIQELEAELKDHINIFVGQSGVGKSSVVNALMPELEIMEGAVSE
NSGLGQHTTTAARLYHFPHGGDLIDSPGVREFGLWHLEKEEVTASFVEFKDFIGGCKFRDCTHKDDPGCLLQEAVSNGKI
AKLRFDSYHRIIESMSENKANRQFSRSRKAD
>Mature_350_residues
AKKKKLTKGQVRRVRSNQSKRIEKIKTTVEWDESSLEAAKEGLVITRFGQHADIEDPDSKEIHRCNLRRGIESLVSGDRV
IWRPGTKILAGISGVVEAVKPRTSMLTRPDYYDGIKPVAANVDQMVIVSSILPELSLNIIDRYLIASETLQIKPLIVLNK
VDLLSEQEFIDVRQILSLYEDIGYKVKFVSKESGYGIQELEAELKDHINIFVGQSGVGKSSVVNALMPELEIMEGAVSEN
SGLGQHTTTAARLYHFPHGGDLIDSPGVREFGLWHLEKEEVTASFVEFKDFIGGCKFRDCTHKDDPGCLLQEAVSNGKIA
KLRFDSYHRIIESMSENKANRQFSRSRKAD

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=345, Percent_Identity=59.1304347826087, Blast_Score=436, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 39373; Mature: 39241

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKKKLTKGQVRRVRSNQSKRIEKIKTTVEWDESSLEAAKEGLVITRFGQHADIEDPDS
CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCCC
KEIHRCNLRRGIESLVSGDRVIWRPGTKILAGISGVVEAVKPRTSMLTRPDYYDGIKPVA
HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCHHHHCCCCCHHCCCCHHH
ANVDQMVIVSSILPELSLNIIDRYLIASETLQIKPLIVLNKVDLLSEQEFIDVRQILSLY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEEEECHHHHCCHHHHHHHHHHHHH
EDIGYKVKFVSKESGYGIQELEAELKDHINIFVGQSGVGKSSVVNALMPELEIMEGAVSE
HHCCCEEEEEECCCCCCHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
NSGLGQHTTTAARLYHFPHGGDLIDSPGVREFGLWHLEKEEVTASFVEFKDFIGGCKFRD
CCCCCCHHHHHHHHEECCCCCCCCCCCCCCHHCCEEECHHHHHHHHHHHHHHHCCCCCCC
CTHKDDPGCLLQEAVSNGKIAKLRFDSYHRIIESMSENKANRQFSRSRKAD
CCCCCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKKKKLTKGQVRRVRSNQSKRIEKIKTTVEWDESSLEAAKEGLVITRFGQHADIEDPDS
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCCC
KEIHRCNLRRGIESLVSGDRVIWRPGTKILAGISGVVEAVKPRTSMLTRPDYYDGIKPVA
HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCHHHHCCCCCHHCCCCHHH
ANVDQMVIVSSILPELSLNIIDRYLIASETLQIKPLIVLNKVDLLSEQEFIDVRQILSLY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEEEEECHHHHCCHHHHHHHHHHHHH
EDIGYKVKFVSKESGYGIQELEAELKDHINIFVGQSGVGKSSVVNALMPELEIMEGAVSE
HHCCCEEEEEECCCCCCHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
NSGLGQHTTTAARLYHFPHGGDLIDSPGVREFGLWHLEKEEVTASFVEFKDFIGGCKFRD
CCCCCCHHHHHHHHEECCCCCCCCCCCCCCHHCCEEECHHHHHHHHHHHHHHHCCCCCCC
CTHKDDPGCLLQEAVSNGKIAKLRFDSYHRIIESMSENKANRQFSRSRKAD
CCCCCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]